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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 130081.XP_005704869.1 |
| PFAMs | Adaptin_N,Alpha_adaptinC2 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K12391 |
| KEGG Pathway | ko04142,map04142 |
| GOs | GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005798,GO:0006810,GO:0006892,GO:0006895,GO:0008150,GO:0012505,GO:0012506,GO:0012510,GO:0016020,GO:0016192,GO:0016482,GO:0030117,GO:0030118,GO:0030119,GO:0030120,GO:0030121,GO:0030125,GO:0030130,GO:0030131,GO:0030133,GO:0030135,GO:0030136,GO:0030140,GO:0030276,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0030665,GO:0031090,GO:0031410,GO:0031982,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0046907,GO:0048193,GO:0048475,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0097708,GO:0098588,GO:0098796,GO:0098805 |
| Evalue | 2.21e-102 |
| EggNOG OGs | COG4354@1|root,KOG1062@2759|Eukaryota |
| Description | intracellular protein transport |
| COG category | G |
| BRITE | ko00000,ko00001,ko04131 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil888.t1 ID=Gchil888.t1|Name=Gchil888.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=863bp MNAKKLLKSAKSNWSKAKRTYICRTLKEVIKAYRACSTRSEERALVKKES AHIRDLFREGDKAFRQRNVAKLLFFHMNGYPTDFGMTECIKLCASNKYND KRIAYLGLMILVDETEQILMLITNSLQRDLQSDDVNIISLALNLLSDIAS IEMVRDLLPQIETHLRADDPYIRKKAALAAVRTVRKLTPDETTGILDAVP AMFESKSQRLYISASALVSALCKQGASDMDTFRQQLVPAVLSVCNDYLLR ERTQQPSKGMSSSLVSKVKNPGIHVKLLSAMRQLILVGLSDEENRMVYDI LSQIASSTESTSLSGCSVLYECVRAIIALNPDVNLWNQSISVLSNFLTHK EATVRYVGLQELIYVADVHGSSALAQISGLKDKVLSGLRESDPTVRKRAA EVLYRTTNDSNCEEMLTALLEYVENSKLPEAIEDGCWKLVSLLEKTGAVD SWKVDMFVRALAIANTQMPEDLVSSFLALISSKEHVQGHAVKQLFTEAFT RKMDETQQSSQVQTNLLEFGDSEQIVEKSEGVVQIDPRNRRLRLERVAIY VVGEYGHTTSTAGLQMSQILGAFQGILASEEIIEDIWLDAKGIDRNAEMS MLTEVALTSLMKFVCRQSSPEQSTGDGLESLFQSLPAPPQESSIAKESTL ADDLLDGLNLDNVKDTRALVPMPTPTGISNREIARLDQRGGDGDGFATGT IPDQVCYILSAHAMSPDIEVQQRACEYMTMLREELRPVLESVMAQLPPLD FVSIQRKASQRRATVPISVSTSTPQRDGVLLDLLGDGSGETEKAFPALPY ADGSGTVPDTTNVSQHQKDMSLFDVLGDSATSSAKTEGMGSDDLLRILAQ PSPDNSSNRPSM* back to topspliced messenger RNA >Gchil888.t1 ID=Gchil888.t1|Name=Gchil888.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2589bp|location=Sequence derived from alignment at tig00000017_pilon:898087..900675- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGAACGCCAAGAAGCTTCTGAAAAGCGCCAAGTCCAACTGGTCAAAGGC AAAACGCACTTATATTTGTCGAACCTTAAAAGAGGTAATCAAAGCATATC GCGCTTGCTCAACTCGTTCTGAAGAGCGCGCGCTCGTCAAAAAAGAGTCT GCCCACATACGAGATCTCTTCCGTGAAGGTGATAAAGCTTTCCGCCAACG TAATGTTGCAAAGCTTCTCTTCTTTCATATGAACGGTTACCCCACTGACT TTGGAATGACCGAATGTATCAAACTCTGTGCTAGCAACAAGTATAATGAT AAGAGAATTGCGTACTTGGGGTTAATGATTCTTGTCGATGAAACTGAACA GATTTTGATGTTGATTACCAACAGTTTGCAGCGAGATCTACAAAGCGACG ATGTCAATATCATTAGTTTGGCCCTTAACCTGTTGAGTGACATTGCCAGC ATAGAGATGGTTCGCGATTTGTTGCCTCAGATTGAGACCCATTTACGTGC CGACGACCCTTATATTCGGAAAAAGGCTGCTTTAGCTGCCGTTCGCACTG TGAGAAAGCTTACGCCTGACGAAACCACTGGCATTCTGGATGCCGTCCCT GCAATGTTTGAATCCAAGTCACAAAGGCTGTACATATCTGCTTCCGCTCT GGTGTCGGCTCTATGTAAACAGGGCGCATCAGACATGGACACATTTCGCC AACAACTTGTTCCTGCCGTACTCAGCGTTTGTAATGACTATCTTCTTCGC GAACGCACACAGCAACCATCGAAGGGAATGTCCTCATCACTTGTTTCCAA GGTCAAGAACCCTGGCATTCATGTCAAGCTACTTTCTGCAATGAGGCAGT TGATATTGGTTGGGCTCTCTGATGAGGAAAACAGAATGGTATATGATATT CTGTCTCAAATCGCCTCTTCAACGGAGTCCACATCGTTGTCTGGATGTTC CGTACTGTATGAATGCGTTCGCGCTATTATTGCACTCAACCCGGACGTAA ATTTATGGAACCAATCAATCTCGGTTTTGAGTAACTTTCTGACACACAAA GAGGCGACTGTCAGATACGTCGGACTGCAAGAACTCATCTATGTTGCTGA TGTTCACGGAAGTAGCGCCCTGGCACAAATTAGTGGGTTGAAGGACAAAG TATTGTCTGGTTTACGTGAGTCAGACCCGACTGTTAGAAAGAGAGCTGCA GAAGTCTTGTATCGAACCACAAACGATTCTAATTGCGAAGAGATGCTTAC GGCACTTCTCGAGTATGTTGAAAACAGCAAGCTTCCAGAAGCCATTGAAG ATGGATGTTGGAAGTTAGTTTCACTGCTCGAAAAAACTGGTGCAGTAGAT TCCTGGAAGGTTGACATGTTTGTGCGAGCTCTGGCGATAGCGAATACGCA AATGCCGGAAGATCTTGTTAGTTCGTTCTTGGCATTGATATCTTCGAAAG AGCATGTCCAAGGTCATGCTGTTAAACAGTTGTTCACAGAGGCATTCACG AGGAAAATGGATGAGACTCAGCAAAGTTCTCAGGTGCAGACGAATCTTCT TGAATTTGGAGATAGCGAGCAGATTGTTGAAAAGTCGGAAGGCGTTGTGC AAATAGATCCGCGGAACCGAAGACTCCGTCTGGAGCGGGTTGCAATATAC GTTGTGGGCGAGTATGGCCACACCACCTCTACTGCCGGACTGCAAATGTC CCAAATTCTTGGCGCATTCCAGGGGATTCTGGCTTCTGAGGAGATTATTG AGGATATCTGGTTGGATGCGAAGGGGATTGACAGGAATGCGGAGATGAGC ATGTTGACCGAAGTTGCTTTAACTAGTTTGATGAAATTTGTCTGCCGCCA GTCTTCACCAGAACAAAGCACAGGAGATGGCCTAGAGTCTTTGTTTCAGA GTCTTCCTGCTCCCCCACAGGAATCCTCAATTGCAAAGGAATCGACATTG GCAGACGATTTGTTGGATGGACTGAATCTGGACAACGTAAAGGATACTCG TGCTCTTGTTCCCATGCCTACACCAACCGGAATTTCGAACAGAGAGATAG CTCGTCTCGATCAGCGAGGCGGGGATGGGGATGGCTTCGCGACCGGTACT ATTCCAGATCAAGTGTGTTACATTCTCTCAGCACATGCAATGTCACCCGA TATTGAAGTACAACAACGAGCTTGTGAGTACATGACTATGCTTCGTGAAG AATTGCGACCTGTTCTGGAAAGTGTTATGGCACAGCTCCCTCCCCTGGAC TTTGTCTCCATTCAAAGAAAGGCCAGTCAAAGAAGAGCGACGGTTCCCAT CAGCGTGAGCACCTCTACTCCGCAGAGGGACGGTGTTCTGTTAGATCTCT TAGGAGATGGAAGTGGCGAAACTGAAAAAGCATTCCCTGCTCTTCCCTAC GCGGATGGCAGTGGTACGGTGCCTGACACTACAAACGTCTCGCAACATCA GAAAGACATGTCTCTCTTCGACGTTCTCGGAGATTCGGCCACTTCTTCCG CGAAAACGGAGGGGATGGGCTCAGATGATCTATTAAGAATTCTCGCGCAA CCATCCCCCGATAATAGTTCCAATAGACCTTCGATGTGA back to topprotein sequence of Gchil888.t1 >Gchil888.t1 ID=Gchil888.t1|Name=Gchil888.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=863bp
MNAKKLLKSAKSNWSKAKRTYICRTLKEVIKAYRACSTRSEERALVKKES AHIRDLFREGDKAFRQRNVAKLLFFHMNGYPTDFGMTECIKLCASNKYND KRIAYLGLMILVDETEQILMLITNSLQRDLQSDDVNIISLALNLLSDIAS IEMVRDLLPQIETHLRADDPYIRKKAALAAVRTVRKLTPDETTGILDAVP AMFESKSQRLYISASALVSALCKQGASDMDTFRQQLVPAVLSVCNDYLLR ERTQQPSKGMSSSLVSKVKNPGIHVKLLSAMRQLILVGLSDEENRMVYDI LSQIASSTESTSLSGCSVLYECVRAIIALNPDVNLWNQSISVLSNFLTHK EATVRYVGLQELIYVADVHGSSALAQISGLKDKVLSGLRESDPTVRKRAA EVLYRTTNDSNCEEMLTALLEYVENSKLPEAIEDGCWKLVSLLEKTGAVD SWKVDMFVRALAIANTQMPEDLVSSFLALISSKEHVQGHAVKQLFTEAFT RKMDETQQSSQVQTNLLEFGDSEQIVEKSEGVVQIDPRNRRLRLERVAIY VVGEYGHTTSTAGLQMSQILGAFQGILASEEIIEDIWLDAKGIDRNAEMS MLTEVALTSLMKFVCRQSSPEQSTGDGLESLFQSLPAPPQESSIAKESTL ADDLLDGLNLDNVKDTRALVPMPTPTGISNREIARLDQRGGDGDGFATGT IPDQVCYILSAHAMSPDIEVQQRACEYMTMLREELRPVLESVMAQLPPLD FVSIQRKASQRRATVPISVSTSTPQRDGVLLDLLGDGSGETEKAFPALPY ADGSGTVPDTTNVSQHQKDMSLFDVLGDSATSSAKTEGMGSDDLLRILAQ PSPDNSSNRPSM* back to topmRNA from alignment at tig00000017_pilon:898087..900675- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil888.t1 ID=Gchil888.t1|Name=Gchil888.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2589bp|location=Sequence derived from alignment at tig00000017_pilon:898087..900675- (Gracilaria chilensis NLEC103_M9 male) ATGAACGCCAAGAAGCTTCTGAAAAGCGCCAAGTCCAACTGGTCAAAGGC
AAAACGCACTTATATTTGTCGAACCTTAAAAGAGGTAATCAAAGCATATC
GCGCTTGCTCAACTCGTTCTGAAGAGCGCGCGCTCGTCAAAAAAGAGTCT
GCCCACATACGAGATCTCTTCCGTGAAGGTGATAAAGCTTTCCGCCAACG
TAATGTTGCAAAGCTTCTCTTCTTTCATATGAACGGTTACCCCACTGACT
TTGGAATGACCGAATGTATCAAACTCTGTGCTAGCAACAAGTATAATGAT
AAGAGAATTGCGTACTTGGGGTTAATGATTCTTGTCGATGAAACTGAACA
GATTTTGATGTTGATTACCAACAGTTTGCAGCGAGATCTACAAAGCGACG
ATGTCAATATCATTAGTTTGGCCCTTAACCTGTTGAGTGACATTGCCAGC
ATAGAGATGGTTCGCGATTTGTTGCCTCAGATTGAGACCCATTTACGTGC
CGACGACCCTTATATTCGGAAAAAGGCTGCTTTAGCTGCCGTTCGCACTG
TGAGAAAGCTTACGCCTGACGAAACCACTGGCATTCTGGATGCCGTCCCT
GCAATGTTTGAATCCAAGTCACAAAGGCTGTACATATCTGCTTCCGCTCT
GGTGTCGGCTCTATGTAAACAGGGCGCATCAGACATGGACACATTTCGCC
AACAACTTGTTCCTGCCGTACTCAGCGTTTGTAATGACTATCTTCTTCGC
GAACGCACACAGCAACCATCGAAGGGAATGTCCTCATCACTTGTTTCCAA
GGTCAAGAACCCTGGCATTCATGTCAAGCTACTTTCTGCAATGAGGCAGT
TGATATTGGTTGGGCTCTCTGATGAGGAAAACAGAATGGTATATGATATT
CTGTCTCAAATCGCCTCTTCAACGGAGTCCACATCGTTGTCTGGATGTTC
CGTACTGTATGAATGCGTTCGCGCTATTATTGCACTCAACCCGGACGTAA
ATTTATGGAACCAATCAATCTCGGTTTTGAGTAACTTTCTGACACACAAA
GAGGCGACTGTCAGATACGTCGGACTGCAAGAACTCATCTATGTTGCTGA
TGTTCACGGAAGTAGCGCCCTGGCACAAATTAGTGGGTTGAAGGACAAAG
TATTGTCTGGTTTACGTGAGTCAGACCCGACTGTTAGAAAGAGAGCTGCA
GAAGTCTTGTATCGAACCACAAACGATTCTAATTGCGAAGAGATGCTTAC
GGCACTTCTCGAGTATGTTGAAAACAGCAAGCTTCCAGAAGCCATTGAAG
ATGGATGTTGGAAGTTAGTTTCACTGCTCGAAAAAACTGGTGCAGTAGAT
TCCTGGAAGGTTGACATGTTTGTGCGAGCTCTGGCGATAGCGAATACGCA
AATGCCGGAAGATCTTGTTAGTTCGTTCTTGGCATTGATATCTTCGAAAG
AGCATGTCCAAGGTCATGCTGTTAAACAGTTGTTCACAGAGGCATTCACG
AGGAAAATGGATGAGACTCAGCAAAGTTCTCAGGTGCAGACGAATCTTCT
TGAATTTGGAGATAGCGAGCAGATTGTTGAAAAGTCGGAAGGCGTTGTGC
AAATAGATCCGCGGAACCGAAGACTCCGTCTGGAGCGGGTTGCAATATAC
GTTGTGGGCGAGTATGGCCACACCACCTCTACTGCCGGACTGCAAATGTC
CCAAATTCTTGGCGCATTCCAGGGGATTCTGGCTTCTGAGGAGATTATTG
AGGATATCTGGTTGGATGCGAAGGGGATTGACAGGAATGCGGAGATGAGC
ATGTTGACCGAAGTTGCTTTAACTAGTTTGATGAAATTTGTCTGCCGCCA
GTCTTCACCAGAACAAAGCACAGGAGATGGCCTAGAGTCTTTGTTTCAGA
GTCTTCCTGCTCCCCCACAGGAATCCTCAATTGCAAAGGAATCGACATTG
GCAGACGATTTGTTGGATGGACTGAATCTGGACAACGTAAAGGATACTCG
TGCTCTTGTTCCCATGCCTACACCAACCGGAATTTCGAACAGAGAGATAG
CTCGTCTCGATCAGCGAGGCGGGGATGGGGATGGCTTCGCGACCGGTACT
ATTCCAGATCAAGTGTGTTACATTCTCTCAGCACATGCAATGTCACCCGA
TATTGAAGTACAACAACGAGCTTGTGAGTACATGACTATGCTTCGTGAAG
AATTGCGACCTGTTCTGGAAAGTGTTATGGCACAGCTCCCTCCCCTGGAC
TTTGTCTCCATTCAAAGAAAGGCCAGTCAAAGAAGAGCGACGGTTCCCAT
CAGCGTGAGCACCTCTACTCCGCAGAGGGACGGTGTTCTGTTAGATCTCT
TAGGAGATGGAAGTGGCGAAACTGAAAAAGCATTCCCTGCTCTTCCCTAC
GCGGATGGCAGTGGTACGGTGCCTGACACTACAAACGTCTCGCAACATCA
GAAAGACATGTCTCTCTTCGACGTTCTCGGAGATTCGGCCACTTCTTCCG
CGAAAACGGAGGGGATGGGCTCAGATGATCTATTAAGAATTCTCGCGCAA
CCATCCCCCGATAATAGTTCCAATAGACCTTCGATGTGA back to topCoding sequence (CDS) from alignment at tig00000017_pilon:898087..900675- >Gchil888.t1 ID=Gchil888.t1|Name=Gchil888.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2589bp|location=Sequence derived from alignment at tig00000017_pilon:898087..900675- (Gracilaria chilensis NLEC103_M9 male) ATGAACGCCAAGAAGCTTCTGAAAAGCGCCAAGTCCAACTGGTCAAAGGC AAAACGCACTTATATTTGTCGAACCTTAAAAGAGGTAATCAAAGCATATC GCGCTTGCTCAACTCGTTCTGAAGAGCGCGCGCTCGTCAAAAAAGAGTCT GCCCACATACGAGATCTCTTCCGTGAAGGTGATAAAGCTTTCCGCCAACG TAATGTTGCAAAGCTTCTCTTCTTTCATATGAACGGTTACCCCACTGACT TTGGAATGACCGAATGTATCAAACTCTGTGCTAGCAACAAGTATAATGAT AAGAGAATTGCGTACTTGGGGTTAATGATTCTTGTCGATGAAACTGAACA GATTTTGATGTTGATTACCAACAGTTTGCAGCGAGATCTACAAAGCGACG ATGTCAATATCATTAGTTTGGCCCTTAACCTGTTGAGTGACATTGCCAGC ATAGAGATGGTTCGCGATTTGTTGCCTCAGATTGAGACCCATTTACGTGC CGACGACCCTTATATTCGGAAAAAGGCTGCTTTAGCTGCCGTTCGCACTG TGAGAAAGCTTACGCCTGACGAAACCACTGGCATTCTGGATGCCGTCCCT GCAATGTTTGAATCCAAGTCACAAAGGCTGTACATATCTGCTTCCGCTCT GGTGTCGGCTCTATGTAAACAGGGCGCATCAGACATGGACACATTTCGCC AACAACTTGTTCCTGCCGTACTCAGCGTTTGTAATGACTATCTTCTTCGC GAACGCACACAGCAACCATCGAAGGGAATGTCCTCATCACTTGTTTCCAA GGTCAAGAACCCTGGCATTCATGTCAAGCTACTTTCTGCAATGAGGCAGT TGATATTGGTTGGGCTCTCTGATGAGGAAAACAGAATGGTATATGATATT CTGTCTCAAATCGCCTCTTCAACGGAGTCCACATCGTTGTCTGGATGTTC CGTACTGTATGAATGCGTTCGCGCTATTATTGCACTCAACCCGGACGTAA ATTTATGGAACCAATCAATCTCGGTTTTGAGTAACTTTCTGACACACAAA GAGGCGACTGTCAGATACGTCGGACTGCAAGAACTCATCTATGTTGCTGA TGTTCACGGAAGTAGCGCCCTGGCACAAATTAGTGGGTTGAAGGACAAAG TATTGTCTGGTTTACGTGAGTCAGACCCGACTGTTAGAAAGAGAGCTGCA GAAGTCTTGTATCGAACCACAAACGATTCTAATTGCGAAGAGATGCTTAC GGCACTTCTCGAGTATGTTGAAAACAGCAAGCTTCCAGAAGCCATTGAAG ATGGATGTTGGAAGTTAGTTTCACTGCTCGAAAAAACTGGTGCAGTAGAT TCCTGGAAGGTTGACATGTTTGTGCGAGCTCTGGCGATAGCGAATACGCA AATGCCGGAAGATCTTGTTAGTTCGTTCTTGGCATTGATATCTTCGAAAG AGCATGTCCAAGGTCATGCTGTTAAACAGTTGTTCACAGAGGCATTCACG AGGAAAATGGATGAGACTCAGCAAAGTTCTCAGGTGCAGACGAATCTTCT TGAATTTGGAGATAGCGAGCAGATTGTTGAAAAGTCGGAAGGCGTTGTGC AAATAGATCCGCGGAACCGAAGACTCCGTCTGGAGCGGGTTGCAATATAC GTTGTGGGCGAGTATGGCCACACCACCTCTACTGCCGGACTGCAAATGTC CCAAATTCTTGGCGCATTCCAGGGGATTCTGGCTTCTGAGGAGATTATTG AGGATATCTGGTTGGATGCGAAGGGGATTGACAGGAATGCGGAGATGAGC ATGTTGACCGAAGTTGCTTTAACTAGTTTGATGAAATTTGTCTGCCGCCA GTCTTCACCAGAACAAAGCACAGGAGATGGCCTAGAGTCTTTGTTTCAGA GTCTTCCTGCTCCCCCACAGGAATCCTCAATTGCAAAGGAATCGACATTG GCAGACGATTTGTTGGATGGACTGAATCTGGACAACGTAAAGGATACTCG TGCTCTTGTTCCCATGCCTACACCAACCGGAATTTCGAACAGAGAGATAG CTCGTCTCGATCAGCGAGGCGGGGATGGGGATGGCTTCGCGACCGGTACT ATTCCAGATCAAGTGTGTTACATTCTCTCAGCACATGCAATGTCACCCGA TATTGAAGTACAACAACGAGCTTGTGAGTACATGACTATGCTTCGTGAAG AATTGCGACCTGTTCTGGAAAGTGTTATGGCACAGCTCCCTCCCCTGGAC TTTGTCTCCATTCAAAGAAAGGCCAGTCAAAGAAGAGCGACGGTTCCCAT CAGCGTGAGCACCTCTACTCCGCAGAGGGACGGTGTTCTGTTAGATCTCT TAGGAGATGGAAGTGGCGAAACTGAAAAAGCATTCCCTGCTCTTCCCTAC GCGGATGGCAGTGGTACGGTGCCTGACACTACAAACGTCTCGCAACATCA GAAAGACATGTCTCTCTTCGACGTTCTCGGAGATTCGGCCACTTCTTCCG CGAAAACGGAGGGGATGGGCTCAGATGATCTATTAAGAATTCTCGCGCAA CCATCCCCCGATAATAGTTCCAATAGACCTTCGATGTGA back to top
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