Gchil2283.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil2283.t1
Unique NameGchil2283.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length202
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004419_piloncontigtig00004419_pilon:854957..855562 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2283Gchil2283Gracilaria chilensis NLEC103_M9 malegenetig00004419_pilon 854957..855562 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2283.t1.stop1Gchil2283.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004419_pilon 854957..854959 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2283.t1.CDS1Gchil2283.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004419_pilon 854957..855562 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2283.t1.exon1Gchil2283.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004419_pilon 854957..855562 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2283.t1.start1Gchil2283.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004419_pilon 855560..855562 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil2283.t1Gchil2283.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004419_pilon 854957..855562 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil2283.t1 ID=Gchil2283.t1|Name=Gchil2283.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=202bp
MRTRHYWLLLSAAYGILNAGAKWKEITDTFLRDIGVLLLEYVPQLFYRRF
SRERLTLAVELVDDILFAAPRHRLTQVINRVKDDYMLGTVVYGSHSEKEF
CNTIHGDHKLQCFELLVISRLRRKEPEDTLKNNEKARFGSLNSSIGWLGI
AASQCRAHAASFIQQKKPLPYVKDLVTQVYVLRGLKKRGTTVSYCKPLRL
K*
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spliced messenger RNA

>Gchil2283.t1 ID=Gchil2283.t1|Name=Gchil2283.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=606bp|location=Sequence derived from alignment at tig00004419_pilon:854957..855562- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGGACAAGACACTATTGGCTACTTCTTTCAGCTGCATATGGCATACT
GAATGCCGGAGCGAAATGGAAGGAAATCACCGACACCTTTCTACGTGATA
TTGGGGTTTTACTGTTAGAGTATGTTCCCCAGCTGTTTTATAGGAGGTTC
AGCAGGGAACGCCTGACCTTAGCTGTCGAATTAGTCGATGACATACTGTT
TGCAGCACCAAGGCATAGACTCACGCAAGTTATTAACAGGGTGAAGGATG
ACTACATGCTCGGAACTGTGGTGTATGGAAGTCACTCAGAAAAAGAATTC
TGCAACACGATACACGGAGACCACAAGCTGCAGTGCTTCGAGCTTCTAGT
AATCAGTCGCTTGAGGCGTAAGGAGCCAGAGGACACACTCAAAAACAATG
AAAAAGCAAGGTTTGGCTCCCTCAACAGCTCTATTGGATGGCTTGGCATT
GCGGCTTCGCAATGTCGTGCCCATGCTGCCAGTTTTATACAGCAGAAGAA
ACCATTACCCTATGTCAAGGATCTTGTGACACAGGTATATGTCTTGAGAG
GTCTAAAGAAGAGAGGCACGACAGTCAGCTACTGTAAACCACTTCGACTG
AAGTAA
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protein sequence of Gchil2283.t1

>Gchil2283.t1 ID=Gchil2283.t1|Name=Gchil2283.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=202bp
MRTRHYWLLLSAAYGILNAGAKWKEITDTFLRDIGVLLLEYVPQLFYRRF
SRERLTLAVELVDDILFAAPRHRLTQVINRVKDDYMLGTVVYGSHSEKEF
CNTIHGDHKLQCFELLVISRLRRKEPEDTLKNNEKARFGSLNSSIGWLGI
AASQCRAHAASFIQQKKPLPYVKDLVTQVYVLRGLKKRGTTVSYCKPLRL
K*
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mRNA from alignment at tig00004419_pilon:854957..855562-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil2283.t1 ID=Gchil2283.t1|Name=Gchil2283.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=606bp|location=Sequence derived from alignment at tig00004419_pilon:854957..855562- (Gracilaria chilensis NLEC103_M9 male)
ATGAGGACAAGACACTATTGGCTACTTCTTTCAGCTGCATATGGCATACT
GAATGCCGGAGCGAAATGGAAGGAAATCACCGACACCTTTCTACGTGATA
TTGGGGTTTTACTGTTAGAGTATGTTCCCCAGCTGTTTTATAGGAGGTTC
AGCAGGGAACGCCTGACCTTAGCTGTCGAATTAGTCGATGACATACTGTT
TGCAGCACCAAGGCATAGACTCACGCAAGTTATTAACAGGGTGAAGGATG
ACTACATGCTCGGAACTGTGGTGTATGGAAGTCACTCAGAAAAAGAATTC
TGCAACACGATACACGGAGACCACAAGCTGCAGTGCTTCGAGCTTCTAGT
AATCAGTCGCTTGAGGCGTAAGGAGCCAGAGGACACACTCAAAAACAATG
AAAAAGCAAGGTTTGGCTCCCTCAACAGCTCTATTGGATGGCTTGGCATT
GCGGCTTCGCAATGTCGTGCCCATGCTGCCAGTTTTATACAGCAGAAGAA
ACCATTACCCTATGTCAAGGATCTTGTGACACAGGTATATGTCTTGAGAG
GTCTAAAGAAGAGAGGCACGACAGTCAGCTACTGTAAACCACTTCGACTG
AAGTAA
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Coding sequence (CDS) from alignment at tig00004419_pilon:854957..855562-

>Gchil2283.t1 ID=Gchil2283.t1|Name=Gchil2283.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=606bp|location=Sequence derived from alignment at tig00004419_pilon:854957..855562- (Gracilaria chilensis NLEC103_M9 male)
ATGAGGACAAGACACTATTGGCTACTTCTTTCAGCTGCATATGGCATACT
GAATGCCGGAGCGAAATGGAAGGAAATCACCGACACCTTTCTACGTGATA
TTGGGGTTTTACTGTTAGAGTATGTTCCCCAGCTGTTTTATAGGAGGTTC
AGCAGGGAACGCCTGACCTTAGCTGTCGAATTAGTCGATGACATACTGTT
TGCAGCACCAAGGCATAGACTCACGCAAGTTATTAACAGGGTGAAGGATG
ACTACATGCTCGGAACTGTGGTGTATGGAAGTCACTCAGAAAAAGAATTC
TGCAACACGATACACGGAGACCACAAGCTGCAGTGCTTCGAGCTTCTAGT
AATCAGTCGCTTGAGGCGTAAGGAGCCAGAGGACACACTCAAAAACAATG
AAAAAGCAAGGTTTGGCTCCCTCAACAGCTCTATTGGATGGCTTGGCATT
GCGGCTTCGCAATGTCGTGCCCATGCTGCCAGTTTTATACAGCAGAAGAA
ACCATTACCCTATGTCAAGGATCTTGTGACACAGGTATATGTCTTGAGAG
GTCTAAAGAAGAGAGGCACGACAGTCAGCTACTGTAAACCACTTCGACTG
AAGTAA
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