|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil10338.t1 ID=Gchil10338.t1|Name=Gchil10338.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=799bp MVIASLSDLVGRHIAHMEVLDGTWKAHTDNVAARCLGAPISAAVGLSVAK AGVFLDGHALFNVKWDELTHSITFGHNEYDNPIGRIYFDNFGMSFLGIIS ASPGSKAYAVRGTTSGRYKTQRRLKGGSGTWEDSVDLVLGTTFVDTLKFF AELGGEDVTDRVTTTAVSGLSTTYDMATVDGMSFDPTSFTITTDPSITGE GHVYSKFNGVFRNEKERKEWEWKGHSDDFRGRSQMHDAHQAILRQAASAI GVPKPLASKTLSIAELHNLSSMIKNSEDPDVELYTDRAQKRGGQYFQDLL NASLEENWAGDILGAPPVLNPELKALRERNSAWLQKEAVPNMGYTLKNCV SDPEYEEHINKIDTTKIEENYKMFYESSEYLDCSFASYVEAYQREVVEIT PYLKDVEGCWGEKYATFLQDEAYLNIWRIRIGSESYDGAKKEVYESYVKV LLLCPEHSEVPDKILGVLVAEVLDVQIKKSHWNNSNNSFVAASTKNMVES NIDFPDFTEIIEEYMIIATEMYQGLGGYERMSEVFEKIIINANYTEERLG LWNPKGLTEAAKAVGKELPSSESGFLRTVDKWGTKSGETLKVLAFGSIGG FFLTHVIDDGTTNLMSAINLPLLGAVQLLYGESDKSFLIAKRLGAWMTTN VKVENGQLEKITSDFSAFYGDDGVIQSSEVYQTLRGSADRFSKVFASAFH TFGMVVSGNSLRTEVQQRKVVPLPYILKCIKLFHKAFKVGMPGVTRTLGW IGPLSKALLVVDLVQMFISWILRLLKPRPDPIRTFIDGPLKRDGYTLE* back to topspliced messenger RNA >Gchil10338.t1 ID=Gchil10338.t1|Name=Gchil10338.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2397bp|location=Sequence derived from alignment at tig00000031_pilon:302043..304439+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGTCATTGCAAGTCTTTCGGACCTTGTGGGACGCCACATCGCCCACAT GGAAGTTCTCGACGGCACGTGGAAGGCACACACGGACAACGTCGCCGCAC GTTGCCTCGGAGCGCCCATATCTGCGGCCGTTGGATTGTCCGTGGCCAAA GCAGGTGTGTTTCTCGACGGTCACGCCCTTTTCAACGTCAAGTGGGATGA ATTAACGCACAGCATTACCTTTGGCCACAACGAGTATGATAATCCCATTG GACGAATCTACTTCGACAATTTCGGCATGTCCTTTCTCGGTATCATCTCA GCTTCACCGGGCTCCAAGGCGTATGCCGTTCGGGGTACCACGTCGGGGCG GTACAAGACTCAACGCAGGCTGAAAGGGGGCAGTGGTACTTGGGAGGACA GTGTCGATCTTGTTTTAGGCACCACGTTCGTAGACACACTCAAATTCTTC GCCGAACTGGGTGGGGAAGATGTAACAGACCGAGTTACCACAACAGCAGT CTCTGGACTTTCCACAACCTACGACATGGCGACAGTAGACGGCATGTCTT TTGACCCCACATCATTCACCATAACCACAGATCCAAGTATCACTGGAGAG GGACATGTTTACAGCAAGTTTAATGGTGTGTTCAGGAATGAGAAAGAACG AAAAGAGTGGGAGTGGAAAGGACACAGTGACGACTTCCGCGGTCGTTCGC AAATGCATGATGCACACCAAGCGATTTTGCGGCAAGCTGCCTCCGCTATT GGAGTGCCAAAACCTCTTGCTTCAAAAACATTATCCATCGCAGAGCTGCA CAATCTCAGTTCTATGATAAAAAATTCTGAAGATCCAGATGTAGAGCTGT ACACTGACAGAGCGCAAAAGAGAGGAGGGCAGTACTTTCAAGATCTTTTG AACGCTTCATTGGAAGAAAATTGGGCGGGTGACATTTTAGGAGCTCCCCC CGTTTTGAATCCGGAATTGAAAGCGTTGCGTGAACGAAACAGTGCCTGGT TACAGAAAGAAGCAGTTCCGAACATGGGATATACCCTCAAAAATTGTGTG TCAGACCCTGAATACGAAGAACACATCAACAAAATCGATACAACGAAGAT CGAGGAAAACTACAAAATGTTTTACGAATCATCTGAATACTTAGACTGCT CGTTTGCTTCGTACGTGGAAGCCTATCAAAGGGAAGTTGTGGAAATCACT CCCTACCTCAAAGACGTTGAAGGTTGTTGGGGAGAAAAGTACGCAACCTT TCTGCAGGATGAAGCCTATTTGAACATTTGGCGCATTCGTATTGGAAGTG AATCATATGACGGCGCGAAGAAAGAAGTTTACGAATCGTACGTGAAGGTA CTCCTTCTGTGCCCAGAACATTCCGAAGTTCCAGATAAAATATTAGGGGT TTTGGTGGCTGAAGTGCTAGACGTGCAAATCAAAAAGTCGCATTGGAACA ACTCAAACAACTCCTTTGTTGCAGCCAGCACAAAAAATATGGTTGAAAGC AACATCGATTTTCCTGATTTCACCGAAATCATTGAAGAATATATGATAAT TGCGACGGAAATGTACCAAGGCCTCGGAGGTTATGAGCGAATGAGCGAAG TTTTTGAAAAAATTATCATCAATGCCAACTACACTGAGGAGAGACTCGGA TTGTGGAATCCGAAAGGGTTAACGGAGGCCGCCAAAGCAGTTGGTAAAGA GCTGCCTTCAAGCGAAAGTGGATTTTTAAGAACCGTAGACAAGTGGGGAA CAAAATCAGGGGAAACTCTCAAGGTCTTGGCTTTCGGGAGTATTGGTGGT TTTTTTCTTACTCACGTGATTGACGACGGTACTACGAACCTCATGTCTGC CATAAATCTTCCTTTGCTTGGGGCGGTACAGTTGCTGTATGGTGAAAGCG ACAAATCATTCTTGATCGCGAAACGTCTTGGAGCATGGATGACGACCAAC GTTAAGGTAGAAAATGGCCAACTGGAAAAAATTACCTCCGACTTCAGCGC CTTTTATGGGGATGATGGAGTTATCCAATCTTCAGAAGTGTACCAAACGT TGAGAGGCTCTGCAGACCGTTTTTCGAAAGTATTCGCTTCCGCTTTTCAC ACATTTGGTATGGTCGTGAGTGGAAATTCGCTTCGAACGGAAGTGCAGCA GAGAAAAGTCGTACCCCTTCCGTATATTCTGAAATGCATCAAACTCTTTC ACAAGGCTTTTAAAGTTGGAATGCCCGGAGTGACAAGGACTTTGGGATGG ATTGGCCCTTTGTCCAAAGCATTACTTGTGGTAGATCTAGTGCAAATGTT CATCTCATGGATACTAAGATTGCTAAAGCCACGACCAGATCCGATAAGAA CTTTCATCGATGGGCCGCTGAAAAGAGACGGCTACACACTAGAATAG back to topprotein sequence of Gchil10338.t1 >Gchil10338.t1 ID=Gchil10338.t1|Name=Gchil10338.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=799bp
MVIASLSDLVGRHIAHMEVLDGTWKAHTDNVAARCLGAPISAAVGLSVAK AGVFLDGHALFNVKWDELTHSITFGHNEYDNPIGRIYFDNFGMSFLGIIS ASPGSKAYAVRGTTSGRYKTQRRLKGGSGTWEDSVDLVLGTTFVDTLKFF AELGGEDVTDRVTTTAVSGLSTTYDMATVDGMSFDPTSFTITTDPSITGE GHVYSKFNGVFRNEKERKEWEWKGHSDDFRGRSQMHDAHQAILRQAASAI GVPKPLASKTLSIAELHNLSSMIKNSEDPDVELYTDRAQKRGGQYFQDLL NASLEENWAGDILGAPPVLNPELKALRERNSAWLQKEAVPNMGYTLKNCV SDPEYEEHINKIDTTKIEENYKMFYESSEYLDCSFASYVEAYQREVVEIT PYLKDVEGCWGEKYATFLQDEAYLNIWRIRIGSESYDGAKKEVYESYVKV LLLCPEHSEVPDKILGVLVAEVLDVQIKKSHWNNSNNSFVAASTKNMVES NIDFPDFTEIIEEYMIIATEMYQGLGGYERMSEVFEKIIINANYTEERLG LWNPKGLTEAAKAVGKELPSSESGFLRTVDKWGTKSGETLKVLAFGSIGG FFLTHVIDDGTTNLMSAINLPLLGAVQLLYGESDKSFLIAKRLGAWMTTN VKVENGQLEKITSDFSAFYGDDGVIQSSEVYQTLRGSADRFSKVFASAFH TFGMVVSGNSLRTEVQQRKVVPLPYILKCIKLFHKAFKVGMPGVTRTLGW IGPLSKALLVVDLVQMFISWILRLLKPRPDPIRTFIDGPLKRDGYTLE* back to topmRNA from alignment at tig00000031_pilon:302043..304439+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil10338.t1 ID=Gchil10338.t1|Name=Gchil10338.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2397bp|location=Sequence derived from alignment at tig00000031_pilon:302043..304439+ (Gracilaria chilensis NLEC103_M9 male) ATGGTCATTGCAAGTCTTTCGGACCTTGTGGGACGCCACATCGCCCACAT
GGAAGTTCTCGACGGCACGTGGAAGGCACACACGGACAACGTCGCCGCAC
GTTGCCTCGGAGCGCCCATATCTGCGGCCGTTGGATTGTCCGTGGCCAAA
GCAGGTGTGTTTCTCGACGGTCACGCCCTTTTCAACGTCAAGTGGGATGA
ATTAACGCACAGCATTACCTTTGGCCACAACGAGTATGATAATCCCATTG
GACGAATCTACTTCGACAATTTCGGCATGTCCTTTCTCGGTATCATCTCA
GCTTCACCGGGCTCCAAGGCGTATGCCGTTCGGGGTACCACGTCGGGGCG
GTACAAGACTCAACGCAGGCTGAAAGGGGGCAGTGGTACTTGGGAGGACA
GTGTCGATCTTGTTTTAGGCACCACGTTCGTAGACACACTCAAATTCTTC
GCCGAACTGGGTGGGGAAGATGTAACAGACCGAGTTACCACAACAGCAGT
CTCTGGACTTTCCACAACCTACGACATGGCGACAGTAGACGGCATGTCTT
TTGACCCCACATCATTCACCATAACCACAGATCCAAGTATCACTGGAGAG
GGACATGTTTACAGCAAGTTTAATGGTGTGTTCAGGAATGAGAAAGAACG
AAAAGAGTGGGAGTGGAAAGGACACAGTGACGACTTCCGCGGTCGTTCGC
AAATGCATGATGCACACCAAGCGATTTTGCGGCAAGCTGCCTCCGCTATT
GGAGTGCCAAAACCTCTTGCTTCAAAAACATTATCCATCGCAGAGCTGCA
CAATCTCAGTTCTATGATAAAAAATTCTGAAGATCCAGATGTAGAGCTGT
ACACTGACAGAGCGCAAAAGAGAGGAGGGCAGTACTTTCAAGATCTTTTG
AACGCTTCATTGGAAGAAAATTGGGCGGGTGACATTTTAGGAGCTCCCCC
CGTTTTGAATCCGGAATTGAAAGCGTTGCGTGAACGAAACAGTGCCTGGT
TACAGAAAGAAGCAGTTCCGAACATGGGATATACCCTCAAAAATTGTGTG
TCAGACCCTGAATACGAAGAACACATCAACAAAATCGATACAACGAAGAT
CGAGGAAAACTACAAAATGTTTTACGAATCATCTGAATACTTAGACTGCT
CGTTTGCTTCGTACGTGGAAGCCTATCAAAGGGAAGTTGTGGAAATCACT
CCCTACCTCAAAGACGTTGAAGGTTGTTGGGGAGAAAAGTACGCAACCTT
TCTGCAGGATGAAGCCTATTTGAACATTTGGCGCATTCGTATTGGAAGTG
AATCATATGACGGCGCGAAGAAAGAAGTTTACGAATCGTACGTGAAGGTA
CTCCTTCTGTGCCCAGAACATTCCGAAGTTCCAGATAAAATATTAGGGGT
TTTGGTGGCTGAAGTGCTAGACGTGCAAATCAAAAAGTCGCATTGGAACA
ACTCAAACAACTCCTTTGTTGCAGCCAGCACAAAAAATATGGTTGAAAGC
AACATCGATTTTCCTGATTTCACCGAAATCATTGAAGAATATATGATAAT
TGCGACGGAAATGTACCAAGGCCTCGGAGGTTATGAGCGAATGAGCGAAG
TTTTTGAAAAAATTATCATCAATGCCAACTACACTGAGGAGAGACTCGGA
TTGTGGAATCCGAAAGGGTTAACGGAGGCCGCCAAAGCAGTTGGTAAAGA
GCTGCCTTCAAGCGAAAGTGGATTTTTAAGAACCGTAGACAAGTGGGGAA
CAAAATCAGGGGAAACTCTCAAGGTCTTGGCTTTCGGGAGTATTGGTGGT
TTTTTTCTTACTCACGTGATTGACGACGGTACTACGAACCTCATGTCTGC
CATAAATCTTCCTTTGCTTGGGGCGGTACAGTTGCTGTATGGTGAAAGCG
ACAAATCATTCTTGATCGCGAAACGTCTTGGAGCATGGATGACGACCAAC
GTTAAGGTAGAAAATGGCCAACTGGAAAAAATTACCTCCGACTTCAGCGC
CTTTTATGGGGATGATGGAGTTATCCAATCTTCAGAAGTGTACCAAACGT
TGAGAGGCTCTGCAGACCGTTTTTCGAAAGTATTCGCTTCCGCTTTTCAC
ACATTTGGTATGGTCGTGAGTGGAAATTCGCTTCGAACGGAAGTGCAGCA
GAGAAAAGTCGTACCCCTTCCGTATATTCTGAAATGCATCAAACTCTTTC
ACAAGGCTTTTAAAGTTGGAATGCCCGGAGTGACAAGGACTTTGGGATGG
ATTGGCCCTTTGTCCAAAGCATTACTTGTGGTAGATCTAGTGCAAATGTT
CATCTCATGGATACTAAGATTGCTAAAGCCACGACCAGATCCGATAAGAA
CTTTCATCGATGGGCCGCTGAAAAGAGACGGCTACACACTAGAATAG back to topCoding sequence (CDS) from alignment at tig00000031_pilon:302043..304439+ >Gchil10338.t1 ID=Gchil10338.t1|Name=Gchil10338.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2397bp|location=Sequence derived from alignment at tig00000031_pilon:302043..304439+ (Gracilaria chilensis NLEC103_M9 male) ATGGTCATTGCAAGTCTTTCGGACCTTGTGGGACGCCACATCGCCCACAT GGAAGTTCTCGACGGCACGTGGAAGGCACACACGGACAACGTCGCCGCAC GTTGCCTCGGAGCGCCCATATCTGCGGCCGTTGGATTGTCCGTGGCCAAA GCAGGTGTGTTTCTCGACGGTCACGCCCTTTTCAACGTCAAGTGGGATGA ATTAACGCACAGCATTACCTTTGGCCACAACGAGTATGATAATCCCATTG GACGAATCTACTTCGACAATTTCGGCATGTCCTTTCTCGGTATCATCTCA GCTTCACCGGGCTCCAAGGCGTATGCCGTTCGGGGTACCACGTCGGGGCG GTACAAGACTCAACGCAGGCTGAAAGGGGGCAGTGGTACTTGGGAGGACA GTGTCGATCTTGTTTTAGGCACCACGTTCGTAGACACACTCAAATTCTTC GCCGAACTGGGTGGGGAAGATGTAACAGACCGAGTTACCACAACAGCAGT CTCTGGACTTTCCACAACCTACGACATGGCGACAGTAGACGGCATGTCTT TTGACCCCACATCATTCACCATAACCACAGATCCAAGTATCACTGGAGAG GGACATGTTTACAGCAAGTTTAATGGTGTGTTCAGGAATGAGAAAGAACG AAAAGAGTGGGAGTGGAAAGGACACAGTGACGACTTCCGCGGTCGTTCGC AAATGCATGATGCACACCAAGCGATTTTGCGGCAAGCTGCCTCCGCTATT GGAGTGCCAAAACCTCTTGCTTCAAAAACATTATCCATCGCAGAGCTGCA CAATCTCAGTTCTATGATAAAAAATTCTGAAGATCCAGATGTAGAGCTGT ACACTGACAGAGCGCAAAAGAGAGGAGGGCAGTACTTTCAAGATCTTTTG AACGCTTCATTGGAAGAAAATTGGGCGGGTGACATTTTAGGAGCTCCCCC CGTTTTGAATCCGGAATTGAAAGCGTTGCGTGAACGAAACAGTGCCTGGT TACAGAAAGAAGCAGTTCCGAACATGGGATATACCCTCAAAAATTGTGTG TCAGACCCTGAATACGAAGAACACATCAACAAAATCGATACAACGAAGAT CGAGGAAAACTACAAAATGTTTTACGAATCATCTGAATACTTAGACTGCT CGTTTGCTTCGTACGTGGAAGCCTATCAAAGGGAAGTTGTGGAAATCACT CCCTACCTCAAAGACGTTGAAGGTTGTTGGGGAGAAAAGTACGCAACCTT TCTGCAGGATGAAGCCTATTTGAACATTTGGCGCATTCGTATTGGAAGTG AATCATATGACGGCGCGAAGAAAGAAGTTTACGAATCGTACGTGAAGGTA CTCCTTCTGTGCCCAGAACATTCCGAAGTTCCAGATAAAATATTAGGGGT TTTGGTGGCTGAAGTGCTAGACGTGCAAATCAAAAAGTCGCATTGGAACA ACTCAAACAACTCCTTTGTTGCAGCCAGCACAAAAAATATGGTTGAAAGC AACATCGATTTTCCTGATTTCACCGAAATCATTGAAGAATATATGATAAT TGCGACGGAAATGTACCAAGGCCTCGGAGGTTATGAGCGAATGAGCGAAG TTTTTGAAAAAATTATCATCAATGCCAACTACACTGAGGAGAGACTCGGA TTGTGGAATCCGAAAGGGTTAACGGAGGCCGCCAAAGCAGTTGGTAAAGA GCTGCCTTCAAGCGAAAGTGGATTTTTAAGAACCGTAGACAAGTGGGGAA CAAAATCAGGGGAAACTCTCAAGGTCTTGGCTTTCGGGAGTATTGGTGGT TTTTTTCTTACTCACGTGATTGACGACGGTACTACGAACCTCATGTCTGC CATAAATCTTCCTTTGCTTGGGGCGGTACAGTTGCTGTATGGTGAAAGCG ACAAATCATTCTTGATCGCGAAACGTCTTGGAGCATGGATGACGACCAAC GTTAAGGTAGAAAATGGCCAACTGGAAAAAATTACCTCCGACTTCAGCGC CTTTTATGGGGATGATGGAGTTATCCAATCTTCAGAAGTGTACCAAACGT TGAGAGGCTCTGCAGACCGTTTTTCGAAAGTATTCGCTTCCGCTTTTCAC ACATTTGGTATGGTCGTGAGTGGAAATTCGCTTCGAACGGAAGTGCAGCA GAGAAAAGTCGTACCCCTTCCGTATATTCTGAAATGCATCAAACTCTTTC ACAAGGCTTTTAAAGTTGGAATGCCCGGAGTGACAAGGACTTTGGGATGG ATTGGCCCTTTGTCCAAAGCATTACTTGTGGTAGATCTAGTGCAAATGTT CATCTCATGGATACTAAGATTGCTAAAGCCACGACCAGATCCGATAAGAA CTTTCATCGATGGGCCGCTGAAAAGAGACGGCTACACACTAGAATAG back to top
|