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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 7739.XP_002611991.1 |
Max annot lvl | 33154|Opisthokonta |
Evalue | 4.6e-21 |
EggNOG OGs | 2CZ3F@1|root,2S872@2759|Eukaryota,3A8NM@33154|Opisthokonta |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil10337.t1 ID=Gchil10337.t1|Name=Gchil10337.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=888bp MTFYDDVLAMAYLVHPSERDVESITQAVEQGVYWRAVREIPDTMKLTIGG LYFIEYDVNVLFYSSKLWRHKFTPTLPNISIGYENFGRALLCSSIQRYSC GNISGMLDWSKIQADAISAFQDLKPHLYLPYSEAIVTEWNSFSALYNRVK HDLRRARGAYRDIVISRANDYAILHATGAWDSSSSELYHHWMKYMALGAT ANEVDQFIKDAKLAGLPVVWTVDVQFWRTYSYYGFVPFGTSSFDGEAREK VLVNHNLAVGGEGRGSCCGLSRAYANTAWRYRYPSSSCFRAGTVVMMEDR KTLSPIEHLEAGDKIWSPSAGAAVNVALIARPLVSGRSLYALNGEKSFQF TSAHPFVLHTEHSLAGHVACVDPIALSHSSPTWSAFGIESLEASSSTLEQ LIIEENGNLLESAMKVRSIEVVEPAVSSGSEMEWIQAVKENPSSREMLYD VILETTELCDGVPVDYVAGSRNMLLRVATEVPPVAAADPNVLIIMKSIIG AIMKFSSGFDDGLRKIMDPAEKWQQQVEIECRLQRLQHNLLEKWFCMAIS LAVYGSSETNSLSLTKGGEYIFGNNNSDGQCSFEEFELQNAVSNIGAAFF ERYEDGSRTNRGLAKSDNSNPGSFRSIMAKLYDAFIISHVQELRGFLDLG FRVFSVPPPTVALSTNEPFHDDHVLAVSVWGIEFHASKLQGHIPHCRHAS VAEMEVSIGSKSLATKCEALRFQGPVADYSANMKFWSSSSKKRILYFSLS DSSAIGSNECKVEVRVKVCESLKLEGYAMTNVTAGRKYKHLFISLDESVG MTDAPLQRQRLAPKPFVEQAKLWADVRVLTSAQVEQERTRSAKVWPPERT RQQAMEFASTAGQAYQLVASEYLKQCRTSLGVDQQRV* back to topspliced messenger RNA >Gchil10337.t1 ID=Gchil10337.t1|Name=Gchil10337.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2664bp|location=Sequence derived from alignment at tig00000031_pilon:297396..300059- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGACGTTCTACGATGATGTGTTGGCCATGGCTTACCTCGTGCACCCTTC TGAGCGTGATGTGGAATCTATCACTCAGGCCGTTGAGCAAGGCGTCTATT GGAGGGCCGTACGCGAAATTCCAGATACGATGAAACTAACGATCGGAGGT CTTTATTTTATAGAATATGATGTCAATGTATTGTTTTACAGCAGCAAATT GTGGAGACATAAGTTCACGCCCACCCTACCTAACATTTCCATCGGGTACG AGAATTTTGGACGAGCCCTACTCTGCTCGTCGATTCAGAGGTACTCGTGC GGCAATATTTCTGGAATGTTGGACTGGAGCAAAATCCAGGCGGATGCCAT AAGTGCGTTTCAGGATCTCAAGCCGCATTTGTACCTTCCATACTCAGAGG CCATTGTCACCGAGTGGAATTCGTTCTCAGCTCTGTACAATCGCGTGAAG CATGACCTACGCCGTGCCCGTGGCGCATACCGTGATATAGTGATATCTAG GGCTAACGATTATGCTATACTTCACGCCACAGGTGCGTGGGACAGCTCTT CGTCTGAGCTCTACCATCACTGGATGAAGTATATGGCTTTAGGAGCTACT GCTAACGAGGTTGATCAGTTCATCAAGGATGCTAAACTTGCGGGACTCCC AGTTGTATGGACCGTAGATGTGCAGTTTTGGCGGACCTATTCATATTATG GATTTGTTCCTTTCGGCACATCATCCTTTGATGGTGAAGCGCGTGAAAAG GTTTTAGTAAACCATAATCTAGCAGTAGGTGGCGAAGGTAGAGGATCCTG CTGCGGATTGTCTAGAGCATATGCAAACACCGCATGGCGATACCGATACC CTTCGTCTTCATGCTTTCGGGCTGGGACCGTTGTAATGATGGAAGACCGG AAGACGCTTTCCCCAATAGAGCATTTGGAAGCAGGAGATAAGATCTGGAG TCCGTCCGCGGGCGCTGCTGTTAATGTCGCGCTCATTGCTCGCCCTTTAG TGTCTGGCCGATCGCTTTACGCCTTGAACGGTGAAAAATCATTTCAGTTT ACTAGTGCGCACCCCTTCGTGTTGCATACAGAGCATAGCCTAGCCGGGCA TGTTGCGTGTGTCGATCCCATTGCACTCTCACACTCCTCTCCGACATGGT CCGCATTCGGGATTGAGTCTCTTGAAGCTTCTTCATCTACGCTGGAGCAA TTGATAATTGAGGAGAATGGAAATCTTTTGGAGAGTGCAATGAAGGTTCG TTCTATTGAAGTTGTAGAGCCGGCTGTTTCATCAGGTAGTGAAATGGAGT GGATACAGGCTGTGAAGGAAAACCCCTCCTCGCGCGAGATGCTGTATGAC GTGATTCTTGAAACGACGGAGCTGTGTGATGGGGTTCCCGTCGACTACGT TGCAGGATCAAGAAACATGCTGCTAAGGGTGGCCACAGAGGTGCCTCCAG TCGCTGCAGCCGACCCGAACGTTTTAATCATTATGAAAAGTATCATTGGT GCTATCATGAAGTTCTCGAGCGGCTTCGATGATGGATTGCGCAAGATAAT GGACCCCGCCGAGAAGTGGCAGCAGCAGGTCGAGATCGAATGCCGACTTC AGAGGCTCCAACACAATCTACTGGAGAAATGGTTTTGCATGGCTATTTCC TTGGCTGTATATGGCAGCTCGGAAACAAACTCGTTGTCGTTGACCAAGGG AGGCGAGTACATATTTGGCAACAACAACTCAGATGGGCAGTGCAGCTTTG AAGAGTTTGAGCTTCAAAACGCTGTTTCCAACATTGGAGCTGCATTTTTT GAGAGATATGAAGATGGTTCTCGAACGAACCGTGGGCTTGCGAAAAGTGA TAACAGCAACCCAGGAAGCTTTCGTAGCATCATGGCCAAGTTGTACGATG CTTTTATCATTTCGCACGTTCAGGAGCTGCGTGGATTTTTGGATCTTGGC TTCAGAGTTTTCAGCGTACCGCCTCCCACGGTGGCCTTGAGTACAAACGA GCCGTTCCATGACGACCATGTACTCGCTGTGTCAGTGTGGGGCATTGAGT TTCACGCCTCGAAACTGCAAGGTCATATTCCTCACTGCCGACATGCAAGT GTAGCGGAGATGGAAGTGTCGATTGGATCGAAGTCTCTCGCTACGAAGTG CGAAGCGCTTCGTTTTCAAGGACCTGTAGCAGATTACAGTGCGAACATGA AATTCTGGTCTTCATCTAGCAAGAAGAGAATCTTGTACTTTTCGCTTTCG GACTCATCAGCTATTGGCTCTAATGAGTGCAAAGTAGAAGTTCGTGTGAA GGTTTGTGAAAGTTTGAAGCTGGAGGGATATGCTATGACAAACGTCACCG CTGGTCGAAAGTACAAGCACTTATTCATATCGCTGGATGAGAGCGTGGGG ATGACGGATGCCCCACTCCAGAGGCAGAGGCTCGCTCCCAAACCTTTCGT GGAGCAAGCCAAACTATGGGCCGATGTTCGCGTGCTGACGAGCGCACAAG TGGAGCAAGAGCGAACACGGAGTGCGAAAGTGTGGCCTCCGGAACGCACG CGCCAACAAGCGATGGAGTTCGCCTCTACAGCGGGTCAGGCGTATCAGCT GGTTGCGTCAGAGTATTTGAAGCAATGCAGAACCTCGCTAGGTGTTGATC AGCAGAGGGTGTGA back to topprotein sequence of Gchil10337.t1 >Gchil10337.t1 ID=Gchil10337.t1|Name=Gchil10337.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=888bp
MTFYDDVLAMAYLVHPSERDVESITQAVEQGVYWRAVREIPDTMKLTIGG LYFIEYDVNVLFYSSKLWRHKFTPTLPNISIGYENFGRALLCSSIQRYSC GNISGMLDWSKIQADAISAFQDLKPHLYLPYSEAIVTEWNSFSALYNRVK HDLRRARGAYRDIVISRANDYAILHATGAWDSSSSELYHHWMKYMALGAT ANEVDQFIKDAKLAGLPVVWTVDVQFWRTYSYYGFVPFGTSSFDGEAREK VLVNHNLAVGGEGRGSCCGLSRAYANTAWRYRYPSSSCFRAGTVVMMEDR KTLSPIEHLEAGDKIWSPSAGAAVNVALIARPLVSGRSLYALNGEKSFQF TSAHPFVLHTEHSLAGHVACVDPIALSHSSPTWSAFGIESLEASSSTLEQ LIIEENGNLLESAMKVRSIEVVEPAVSSGSEMEWIQAVKENPSSREMLYD VILETTELCDGVPVDYVAGSRNMLLRVATEVPPVAAADPNVLIIMKSIIG AIMKFSSGFDDGLRKIMDPAEKWQQQVEIECRLQRLQHNLLEKWFCMAIS LAVYGSSETNSLSLTKGGEYIFGNNNSDGQCSFEEFELQNAVSNIGAAFF ERYEDGSRTNRGLAKSDNSNPGSFRSIMAKLYDAFIISHVQELRGFLDLG FRVFSVPPPTVALSTNEPFHDDHVLAVSVWGIEFHASKLQGHIPHCRHAS VAEMEVSIGSKSLATKCEALRFQGPVADYSANMKFWSSSSKKRILYFSLS DSSAIGSNECKVEVRVKVCESLKLEGYAMTNVTAGRKYKHLFISLDESVG MTDAPLQRQRLAPKPFVEQAKLWADVRVLTSAQVEQERTRSAKVWPPERT RQQAMEFASTAGQAYQLVASEYLKQCRTSLGVDQQRV* back to topmRNA from alignment at tig00000031_pilon:297396..300059- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil10337.t1 ID=Gchil10337.t1|Name=Gchil10337.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2664bp|location=Sequence derived from alignment at tig00000031_pilon:297396..300059- (Gracilaria chilensis NLEC103_M9 male) ATGACGTTCTACGATGATGTGTTGGCCATGGCTTACCTCGTGCACCCTTC
TGAGCGTGATGTGGAATCTATCACTCAGGCCGTTGAGCAAGGCGTCTATT
GGAGGGCCGTACGCGAAATTCCAGATACGATGAAACTAACGATCGGAGGT
CTTTATTTTATAGAATATGATGTCAATGTATTGTTTTACAGCAGCAAATT
GTGGAGACATAAGTTCACGCCCACCCTACCTAACATTTCCATCGGGTACG
AGAATTTTGGACGAGCCCTACTCTGCTCGTCGATTCAGAGGTACTCGTGC
GGCAATATTTCTGGAATGTTGGACTGGAGCAAAATCCAGGCGGATGCCAT
AAGTGCGTTTCAGGATCTCAAGCCGCATTTGTACCTTCCATACTCAGAGG
CCATTGTCACCGAGTGGAATTCGTTCTCAGCTCTGTACAATCGCGTGAAG
CATGACCTACGCCGTGCCCGTGGCGCATACCGTGATATAGTGATATCTAG
GGCTAACGATTATGCTATACTTCACGCCACAGGTGCGTGGGACAGCTCTT
CGTCTGAGCTCTACCATCACTGGATGAAGTATATGGCTTTAGGAGCTACT
GCTAACGAGGTTGATCAGTTCATCAAGGATGCTAAACTTGCGGGACTCCC
AGTTGTATGGACCGTAGATGTGCAGTTTTGGCGGACCTATTCATATTATG
GATTTGTTCCTTTCGGCACATCATCCTTTGATGGTGAAGCGCGTGAAAAG
GTTTTAGTAAACCATAATCTAGCAGTAGGTGGCGAAGGTAGAGGATCCTG
CTGCGGATTGTCTAGAGCATATGCAAACACCGCATGGCGATACCGATACC
CTTCGTCTTCATGCTTTCGGGCTGGGACCGTTGTAATGATGGAAGACCGG
AAGACGCTTTCCCCAATAGAGCATTTGGAAGCAGGAGATAAGATCTGGAG
TCCGTCCGCGGGCGCTGCTGTTAATGTCGCGCTCATTGCTCGCCCTTTAG
TGTCTGGCCGATCGCTTTACGCCTTGAACGGTGAAAAATCATTTCAGTTT
ACTAGTGCGCACCCCTTCGTGTTGCATACAGAGCATAGCCTAGCCGGGCA
TGTTGCGTGTGTCGATCCCATTGCACTCTCACACTCCTCTCCGACATGGT
CCGCATTCGGGATTGAGTCTCTTGAAGCTTCTTCATCTACGCTGGAGCAA
TTGATAATTGAGGAGAATGGAAATCTTTTGGAGAGTGCAATGAAGGTTCG
TTCTATTGAAGTTGTAGAGCCGGCTGTTTCATCAGGTAGTGAAATGGAGT
GGATACAGGCTGTGAAGGAAAACCCCTCCTCGCGCGAGATGCTGTATGAC
GTGATTCTTGAAACGACGGAGCTGTGTGATGGGGTTCCCGTCGACTACGT
TGCAGGATCAAGAAACATGCTGCTAAGGGTGGCCACAGAGGTGCCTCCAG
TCGCTGCAGCCGACCCGAACGTTTTAATCATTATGAAAAGTATCATTGGT
GCTATCATGAAGTTCTCGAGCGGCTTCGATGATGGATTGCGCAAGATAAT
GGACCCCGCCGAGAAGTGGCAGCAGCAGGTCGAGATCGAATGCCGACTTC
AGAGGCTCCAACACAATCTACTGGAGAAATGGTTTTGCATGGCTATTTCC
TTGGCTGTATATGGCAGCTCGGAAACAAACTCGTTGTCGTTGACCAAGGG
AGGCGAGTACATATTTGGCAACAACAACTCAGATGGGCAGTGCAGCTTTG
AAGAGTTTGAGCTTCAAAACGCTGTTTCCAACATTGGAGCTGCATTTTTT
GAGAGATATGAAGATGGTTCTCGAACGAACCGTGGGCTTGCGAAAAGTGA
TAACAGCAACCCAGGAAGCTTTCGTAGCATCATGGCCAAGTTGTACGATG
CTTTTATCATTTCGCACGTTCAGGAGCTGCGTGGATTTTTGGATCTTGGC
TTCAGAGTTTTCAGCGTACCGCCTCCCACGGTGGCCTTGAGTACAAACGA
GCCGTTCCATGACGACCATGTACTCGCTGTGTCAGTGTGGGGCATTGAGT
TTCACGCCTCGAAACTGCAAGGTCATATTCCTCACTGCCGACATGCAAGT
GTAGCGGAGATGGAAGTGTCGATTGGATCGAAGTCTCTCGCTACGAAGTG
CGAAGCGCTTCGTTTTCAAGGACCTGTAGCAGATTACAGTGCGAACATGA
AATTCTGGTCTTCATCTAGCAAGAAGAGAATCTTGTACTTTTCGCTTTCG
GACTCATCAGCTATTGGCTCTAATGAGTGCAAAGTAGAAGTTCGTGTGAA
GGTTTGTGAAAGTTTGAAGCTGGAGGGATATGCTATGACAAACGTCACCG
CTGGTCGAAAGTACAAGCACTTATTCATATCGCTGGATGAGAGCGTGGGG
ATGACGGATGCCCCACTCCAGAGGCAGAGGCTCGCTCCCAAACCTTTCGT
GGAGCAAGCCAAACTATGGGCCGATGTTCGCGTGCTGACGAGCGCACAAG
TGGAGCAAGAGCGAACACGGAGTGCGAAAGTGTGGCCTCCGGAACGCACG
CGCCAACAAGCGATGGAGTTCGCCTCTACAGCGGGTCAGGCGTATCAGCT
GGTTGCGTCAGAGTATTTGAAGCAATGCAGAACCTCGCTAGGTGTTGATC
AGCAGAGGGTGTGA back to topCoding sequence (CDS) from alignment at tig00000031_pilon:297396..300059- >Gchil10337.t1 ID=Gchil10337.t1|Name=Gchil10337.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2664bp|location=Sequence derived from alignment at tig00000031_pilon:297396..300059- (Gracilaria chilensis NLEC103_M9 male) ATGACGTTCTACGATGATGTGTTGGCCATGGCTTACCTCGTGCACCCTTC TGAGCGTGATGTGGAATCTATCACTCAGGCCGTTGAGCAAGGCGTCTATT GGAGGGCCGTACGCGAAATTCCAGATACGATGAAACTAACGATCGGAGGT CTTTATTTTATAGAATATGATGTCAATGTATTGTTTTACAGCAGCAAATT GTGGAGACATAAGTTCACGCCCACCCTACCTAACATTTCCATCGGGTACG AGAATTTTGGACGAGCCCTACTCTGCTCGTCGATTCAGAGGTACTCGTGC GGCAATATTTCTGGAATGTTGGACTGGAGCAAAATCCAGGCGGATGCCAT AAGTGCGTTTCAGGATCTCAAGCCGCATTTGTACCTTCCATACTCAGAGG CCATTGTCACCGAGTGGAATTCGTTCTCAGCTCTGTACAATCGCGTGAAG CATGACCTACGCCGTGCCCGTGGCGCATACCGTGATATAGTGATATCTAG GGCTAACGATTATGCTATACTTCACGCCACAGGTGCGTGGGACAGCTCTT CGTCTGAGCTCTACCATCACTGGATGAAGTATATGGCTTTAGGAGCTACT GCTAACGAGGTTGATCAGTTCATCAAGGATGCTAAACTTGCGGGACTCCC AGTTGTATGGACCGTAGATGTGCAGTTTTGGCGGACCTATTCATATTATG GATTTGTTCCTTTCGGCACATCATCCTTTGATGGTGAAGCGCGTGAAAAG GTTTTAGTAAACCATAATCTAGCAGTAGGTGGCGAAGGTAGAGGATCCTG CTGCGGATTGTCTAGAGCATATGCAAACACCGCATGGCGATACCGATACC CTTCGTCTTCATGCTTTCGGGCTGGGACCGTTGTAATGATGGAAGACCGG AAGACGCTTTCCCCAATAGAGCATTTGGAAGCAGGAGATAAGATCTGGAG TCCGTCCGCGGGCGCTGCTGTTAATGTCGCGCTCATTGCTCGCCCTTTAG TGTCTGGCCGATCGCTTTACGCCTTGAACGGTGAAAAATCATTTCAGTTT ACTAGTGCGCACCCCTTCGTGTTGCATACAGAGCATAGCCTAGCCGGGCA TGTTGCGTGTGTCGATCCCATTGCACTCTCACACTCCTCTCCGACATGGT CCGCATTCGGGATTGAGTCTCTTGAAGCTTCTTCATCTACGCTGGAGCAA TTGATAATTGAGGAGAATGGAAATCTTTTGGAGAGTGCAATGAAGGTTCG TTCTATTGAAGTTGTAGAGCCGGCTGTTTCATCAGGTAGTGAAATGGAGT GGATACAGGCTGTGAAGGAAAACCCCTCCTCGCGCGAGATGCTGTATGAC GTGATTCTTGAAACGACGGAGCTGTGTGATGGGGTTCCCGTCGACTACGT TGCAGGATCAAGAAACATGCTGCTAAGGGTGGCCACAGAGGTGCCTCCAG TCGCTGCAGCCGACCCGAACGTTTTAATCATTATGAAAAGTATCATTGGT GCTATCATGAAGTTCTCGAGCGGCTTCGATGATGGATTGCGCAAGATAAT GGACCCCGCCGAGAAGTGGCAGCAGCAGGTCGAGATCGAATGCCGACTTC AGAGGCTCCAACACAATCTACTGGAGAAATGGTTTTGCATGGCTATTTCC TTGGCTGTATATGGCAGCTCGGAAACAAACTCGTTGTCGTTGACCAAGGG AGGCGAGTACATATTTGGCAACAACAACTCAGATGGGCAGTGCAGCTTTG AAGAGTTTGAGCTTCAAAACGCTGTTTCCAACATTGGAGCTGCATTTTTT GAGAGATATGAAGATGGTTCTCGAACGAACCGTGGGCTTGCGAAAAGTGA TAACAGCAACCCAGGAAGCTTTCGTAGCATCATGGCCAAGTTGTACGATG CTTTTATCATTTCGCACGTTCAGGAGCTGCGTGGATTTTTGGATCTTGGC TTCAGAGTTTTCAGCGTACCGCCTCCCACGGTGGCCTTGAGTACAAACGA GCCGTTCCATGACGACCATGTACTCGCTGTGTCAGTGTGGGGCATTGAGT TTCACGCCTCGAAACTGCAAGGTCATATTCCTCACTGCCGACATGCAAGT GTAGCGGAGATGGAAGTGTCGATTGGATCGAAGTCTCTCGCTACGAAGTG CGAAGCGCTTCGTTTTCAAGGACCTGTAGCAGATTACAGTGCGAACATGA AATTCTGGTCTTCATCTAGCAAGAAGAGAATCTTGTACTTTTCGCTTTCG GACTCATCAGCTATTGGCTCTAATGAGTGCAAAGTAGAAGTTCGTGTGAA GGTTTGTGAAAGTTTGAAGCTGGAGGGATATGCTATGACAAACGTCACCG CTGGTCGAAAGTACAAGCACTTATTCATATCGCTGGATGAGAGCGTGGGG ATGACGGATGCCCCACTCCAGAGGCAGAGGCTCGCTCCCAAACCTTTCGT GGAGCAAGCCAAACTATGGGCCGATGTTCGCGTGCTGACGAGCGCACAAG TGGAGCAAGAGCGAACACGGAGTGCGAAAGTGTGGCCTCCGGAACGCACG CGCCAACAAGCGATGGAGTTCGCCTCTACAGCGGGTCAGGCGTATCAGCT GGTTGCGTCAGAGTATTTGAAGCAATGCAGAACCTCGCTAGGTGTTGATC AGCAGAGGGTGTGA back to top
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