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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 15368.BRADI1G29760.1 |
PFAMs | Glyco_transf_92 |
Max annot lvl | 35493|Streptophyta |
Evalue | 5.39e-12 |
EggNOG OGs | COG0463@1|root,2QTF9@2759|Eukaryota,37N9S@33090|Viridiplantae,3GBHN@35493|Streptophyta,3KVVU@4447|Liliopsida,3I4Q3@38820|Poales |
Description | Glycosyltransferase family 92 |
COG category | M |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil10331.t1 ID=Gchil10331.t1|Name=Gchil10331.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=591bp MKAPNTPHPYVCDTNLFLSHPLSNSKRRPNGFAHLRKGIRKLFVSRNVVL FGAFVLAVAVLVPSFVFPNEFETRTRWLLNRERSTVVLSMRSGASEHSPT NWSLPPRIHTIYKMSRDNPEVQHIRTRDWTRPHIFLHYARPHPLDRTTAE LFIFANGVTLGDFNRNINVVGCLVGQDVYPAEMLKGDVFSCQVPLPIQAG SLISLVLPHSDEIRHQVQKGVKLAPHLDASIKENDLVPLSNGTRLHFDRV HDSLMYVSSEQRYEALADDWDPDADDSPPRYEVCLGTQIKPFTNYLDDWI AYYTRIGVDMVFVADNDAPVDLSKKYEGRDDVQVLYWPWRRSQVQGLTYI TIAARPRCEWIMIADVDELPMLGIGENRQLAGKHVLRRYLRRHLSSEYKQ FHFPFLVMGNSGLVRTPPGPMPEVYVHMADNHPQNGKSVARTDHWWRFTS LHMFGGIPTAVAPVDWNATRKYYPVDEDDQPITVHFHHRAFEDMIVKQKY GSATTDGAPGPNQDLELPAEIPAWVTKIDDSKQYYYFRDIYRAIMKHPFE LKQTLVRKSEGKRCMASLYTVGERRGMIEEGYGCGHGEQY* back to topspliced messenger RNA >Gchil10331.t1 ID=Gchil10331.t1|Name=Gchil10331.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1773bp|location=Sequence derived from alignment at tig00000031_pilon:68311..70083- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGAAAGCTCCAAACACCCCTCACCCGTATGTCTGTGACACCAACTTATT TCTCTCTCACCCTTTGTCCAATTCGAAACGACGGCCCAATGGTTTTGCTC ACCTGAGAAAAGGCATTCGCAAACTTTTCGTCTCGCGAAACGTTGTGCTC TTCGGCGCCTTCGTTCTTGCCGTCGCTGTGCTTGTACCGTCGTTCGTGTT TCCAAACGAGTTTGAAACTCGAACAAGATGGCTGCTCAACCGCGAACGGT CTACCGTCGTGTTGTCCATGCGTTCGGGAGCATCGGAACATAGTCCCACC AACTGGTCATTACCGCCGCGCATTCACACCATCTACAAGATGAGTCGCGA CAACCCGGAGGTGCAACACATTCGCACGCGAGATTGGACGCGTCCACATA TTTTTTTGCATTACGCGCGACCGCATCCACTTGACCGCACCACTGCAGAG CTCTTCATTTTTGCCAATGGAGTCACGTTGGGTGATTTCAATCGCAATAT CAACGTGGTCGGTTGTCTTGTTGGTCAAGATGTTTATCCAGCCGAAATGC TCAAGGGAGATGTGTTCTCCTGTCAAGTTCCATTACCCATTCAAGCAGGC AGTCTTATCTCCCTCGTTCTACCTCACAGCGACGAGATCCGCCACCAAGT GCAGAAGGGCGTGAAACTCGCTCCGCATCTCGACGCCAGCATCAAAGAGA ATGATCTTGTTCCGTTGTCGAATGGTACGCGTCTTCACTTCGACCGGGTA CACGACTCCTTGATGTATGTCAGCTCTGAACAACGGTACGAAGCGCTTGC AGATGATTGGGATCCAGATGCTGATGATAGTCCCCCCCGATACGAAGTGT GCCTCGGAACACAAATCAAGCCTTTCACCAACTACCTTGATGATTGGATT GCGTACTACACGCGAATCGGGGTGGATATGGTGTTCGTTGCGGACAACGA CGCACCAGTTGATCTTTCCAAAAAGTACGAGGGCAGAGACGATGTTCAGG TGTTGTATTGGCCTTGGCGTCGATCTCAAGTGCAAGGACTCACTTACATC ACCATTGCGGCACGGCCACGCTGTGAATGGATAATGATAGCTGACGTTGA TGAACTTCCAATGCTTGGCATAGGAGAGAACAGGCAACTAGCTGGGAAGC ACGTGCTGAGGCGATACTTGCGACGTCATCTAAGCAGTGAATACAAGCAG TTTCATTTCCCATTCTTGGTCATGGGAAACTCAGGACTTGTGAGAACGCC ACCAGGTCCGATGCCAGAAGTGTATGTGCACATGGCTGACAACCATCCGC AGAATGGCAAGTCAGTCGCTCGTACTGATCACTGGTGGAGATTCACATCT TTACATATGTTTGGAGGGATACCCACCGCAGTGGCTCCGGTGGATTGGAA TGCTACCCGCAAATACTACCCTGTTGACGAAGACGATCAACCGATCACAG TACATTTCCATCACCGCGCGTTTGAGGACATGATTGTGAAACAGAAGTAT GGTTCCGCTACCACTGACGGCGCACCTGGTCCCAACCAGGACCTCGAACT TCCAGCTGAAATACCTGCTTGGGTCACAAAGATCGACGACAGCAAGCAGT ACTATTACTTTCGGGACATTTATCGTGCCATCATGAAGCATCCATTCGAA CTAAAGCAAACGCTCGTTAGAAAATCTGAAGGAAAGAGATGTATGGCCAG TCTTTACACCGTCGGTGAAAGACGGGGAATGATAGAAGAAGGATATGGAT GTGGCCACGGAGAGCAATATTGA back to topprotein sequence of Gchil10331.t1 >Gchil10331.t1 ID=Gchil10331.t1|Name=Gchil10331.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=591bp
MKAPNTPHPYVCDTNLFLSHPLSNSKRRPNGFAHLRKGIRKLFVSRNVVL FGAFVLAVAVLVPSFVFPNEFETRTRWLLNRERSTVVLSMRSGASEHSPT NWSLPPRIHTIYKMSRDNPEVQHIRTRDWTRPHIFLHYARPHPLDRTTAE LFIFANGVTLGDFNRNINVVGCLVGQDVYPAEMLKGDVFSCQVPLPIQAG SLISLVLPHSDEIRHQVQKGVKLAPHLDASIKENDLVPLSNGTRLHFDRV HDSLMYVSSEQRYEALADDWDPDADDSPPRYEVCLGTQIKPFTNYLDDWI AYYTRIGVDMVFVADNDAPVDLSKKYEGRDDVQVLYWPWRRSQVQGLTYI TIAARPRCEWIMIADVDELPMLGIGENRQLAGKHVLRRYLRRHLSSEYKQ FHFPFLVMGNSGLVRTPPGPMPEVYVHMADNHPQNGKSVARTDHWWRFTS LHMFGGIPTAVAPVDWNATRKYYPVDEDDQPITVHFHHRAFEDMIVKQKY GSATTDGAPGPNQDLELPAEIPAWVTKIDDSKQYYYFRDIYRAIMKHPFE LKQTLVRKSEGKRCMASLYTVGERRGMIEEGYGCGHGEQY* back to topmRNA from alignment at tig00000031_pilon:68311..70083- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil10331.t1 ID=Gchil10331.t1|Name=Gchil10331.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1773bp|location=Sequence derived from alignment at tig00000031_pilon:68311..70083- (Gracilaria chilensis NLEC103_M9 male) ATGAAAGCTCCAAACACCCCTCACCCGTATGTCTGTGACACCAACTTATT
TCTCTCTCACCCTTTGTCCAATTCGAAACGACGGCCCAATGGTTTTGCTC
ACCTGAGAAAAGGCATTCGCAAACTTTTCGTCTCGCGAAACGTTGTGCTC
TTCGGCGCCTTCGTTCTTGCCGTCGCTGTGCTTGTACCGTCGTTCGTGTT
TCCAAACGAGTTTGAAACTCGAACAAGATGGCTGCTCAACCGCGAACGGT
CTACCGTCGTGTTGTCCATGCGTTCGGGAGCATCGGAACATAGTCCCACC
AACTGGTCATTACCGCCGCGCATTCACACCATCTACAAGATGAGTCGCGA
CAACCCGGAGGTGCAACACATTCGCACGCGAGATTGGACGCGTCCACATA
TTTTTTTGCATTACGCGCGACCGCATCCACTTGACCGCACCACTGCAGAG
CTCTTCATTTTTGCCAATGGAGTCACGTTGGGTGATTTCAATCGCAATAT
CAACGTGGTCGGTTGTCTTGTTGGTCAAGATGTTTATCCAGCCGAAATGC
TCAAGGGAGATGTGTTCTCCTGTCAAGTTCCATTACCCATTCAAGCAGGC
AGTCTTATCTCCCTCGTTCTACCTCACAGCGACGAGATCCGCCACCAAGT
GCAGAAGGGCGTGAAACTCGCTCCGCATCTCGACGCCAGCATCAAAGAGA
ATGATCTTGTTCCGTTGTCGAATGGTACGCGTCTTCACTTCGACCGGGTA
CACGACTCCTTGATGTATGTCAGCTCTGAACAACGGTACGAAGCGCTTGC
AGATGATTGGGATCCAGATGCTGATGATAGTCCCCCCCGATACGAAGTGT
GCCTCGGAACACAAATCAAGCCTTTCACCAACTACCTTGATGATTGGATT
GCGTACTACACGCGAATCGGGGTGGATATGGTGTTCGTTGCGGACAACGA
CGCACCAGTTGATCTTTCCAAAAAGTACGAGGGCAGAGACGATGTTCAGG
TGTTGTATTGGCCTTGGCGTCGATCTCAAGTGCAAGGACTCACTTACATC
ACCATTGCGGCACGGCCACGCTGTGAATGGATAATGATAGCTGACGTTGA
TGAACTTCCAATGCTTGGCATAGGAGAGAACAGGCAACTAGCTGGGAAGC
ACGTGCTGAGGCGATACTTGCGACGTCATCTAAGCAGTGAATACAAGCAG
TTTCATTTCCCATTCTTGGTCATGGGAAACTCAGGACTTGTGAGAACGCC
ACCAGGTCCGATGCCAGAAGTGTATGTGCACATGGCTGACAACCATCCGC
AGAATGGCAAGTCAGTCGCTCGTACTGATCACTGGTGGAGATTCACATCT
TTACATATGTTTGGAGGGATACCCACCGCAGTGGCTCCGGTGGATTGGAA
TGCTACCCGCAAATACTACCCTGTTGACGAAGACGATCAACCGATCACAG
TACATTTCCATCACCGCGCGTTTGAGGACATGATTGTGAAACAGAAGTAT
GGTTCCGCTACCACTGACGGCGCACCTGGTCCCAACCAGGACCTCGAACT
TCCAGCTGAAATACCTGCTTGGGTCACAAAGATCGACGACAGCAAGCAGT
ACTATTACTTTCGGGACATTTATCGTGCCATCATGAAGCATCCATTCGAA
CTAAAGCAAACGCTCGTTAGAAAATCTGAAGGAAAGAGATGTATGGCCAG
TCTTTACACCGTCGGTGAAAGACGGGGAATGATAGAAGAAGGATATGGAT
GTGGCCACGGAGAGCAATATTGA back to topCoding sequence (CDS) from alignment at tig00000031_pilon:68311..70083- >Gchil10331.t1 ID=Gchil10331.t1|Name=Gchil10331.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1773bp|location=Sequence derived from alignment at tig00000031_pilon:68311..70083- (Gracilaria chilensis NLEC103_M9 male) ATGAAAGCTCCAAACACCCCTCACCCGTATGTCTGTGACACCAACTTATT TCTCTCTCACCCTTTGTCCAATTCGAAACGACGGCCCAATGGTTTTGCTC ACCTGAGAAAAGGCATTCGCAAACTTTTCGTCTCGCGAAACGTTGTGCTC TTCGGCGCCTTCGTTCTTGCCGTCGCTGTGCTTGTACCGTCGTTCGTGTT TCCAAACGAGTTTGAAACTCGAACAAGATGGCTGCTCAACCGCGAACGGT CTACCGTCGTGTTGTCCATGCGTTCGGGAGCATCGGAACATAGTCCCACC AACTGGTCATTACCGCCGCGCATTCACACCATCTACAAGATGAGTCGCGA CAACCCGGAGGTGCAACACATTCGCACGCGAGATTGGACGCGTCCACATA TTTTTTTGCATTACGCGCGACCGCATCCACTTGACCGCACCACTGCAGAG CTCTTCATTTTTGCCAATGGAGTCACGTTGGGTGATTTCAATCGCAATAT CAACGTGGTCGGTTGTCTTGTTGGTCAAGATGTTTATCCAGCCGAAATGC TCAAGGGAGATGTGTTCTCCTGTCAAGTTCCATTACCCATTCAAGCAGGC AGTCTTATCTCCCTCGTTCTACCTCACAGCGACGAGATCCGCCACCAAGT GCAGAAGGGCGTGAAACTCGCTCCGCATCTCGACGCCAGCATCAAAGAGA ATGATCTTGTTCCGTTGTCGAATGGTACGCGTCTTCACTTCGACCGGGTA CACGACTCCTTGATGTATGTCAGCTCTGAACAACGGTACGAAGCGCTTGC AGATGATTGGGATCCAGATGCTGATGATAGTCCCCCCCGATACGAAGTGT GCCTCGGAACACAAATCAAGCCTTTCACCAACTACCTTGATGATTGGATT GCGTACTACACGCGAATCGGGGTGGATATGGTGTTCGTTGCGGACAACGA CGCACCAGTTGATCTTTCCAAAAAGTACGAGGGCAGAGACGATGTTCAGG TGTTGTATTGGCCTTGGCGTCGATCTCAAGTGCAAGGACTCACTTACATC ACCATTGCGGCACGGCCACGCTGTGAATGGATAATGATAGCTGACGTTGA TGAACTTCCAATGCTTGGCATAGGAGAGAACAGGCAACTAGCTGGGAAGC ACGTGCTGAGGCGATACTTGCGACGTCATCTAAGCAGTGAATACAAGCAG TTTCATTTCCCATTCTTGGTCATGGGAAACTCAGGACTTGTGAGAACGCC ACCAGGTCCGATGCCAGAAGTGTATGTGCACATGGCTGACAACCATCCGC AGAATGGCAAGTCAGTCGCTCGTACTGATCACTGGTGGAGATTCACATCT TTACATATGTTTGGAGGGATACCCACCGCAGTGGCTCCGGTGGATTGGAA TGCTACCCGCAAATACTACCCTGTTGACGAAGACGATCAACCGATCACAG TACATTTCCATCACCGCGCGTTTGAGGACATGATTGTGAAACAGAAGTAT GGTTCCGCTACCACTGACGGCGCACCTGGTCCCAACCAGGACCTCGAACT TCCAGCTGAAATACCTGCTTGGGTCACAAAGATCGACGACAGCAAGCAGT ACTATTACTTTCGGGACATTTATCGTGCCATCATGAAGCATCCATTCGAA CTAAAGCAAACGCTCGTTAGAAAATCTGAAGGAAAGAGATGTATGGCCAG TCTTTACACCGTCGGTGAAAGACGGGGAATGATAGAAGAAGGATATGGAT GTGGCCACGGAGAGCAATATTGA back to top
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