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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 1394178.AWOO02000016_gene6846 |
PFAMs | Acetyltransf_1 |
Max annot lvl | 201174|Actinobacteria |
Evalue | 4.06e-26 |
EggNOG OGs | COG0454@1|root,COG0456@2|Bacteria,2I9Y3@201174|Actinobacteria,4ER9I@85012|Streptosporangiales |
Description | Acetyltransferase (GNAT) domain |
COG category | K |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil10256.t1 ID=Gchil10256.t1|Name=Gchil10256.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=215bp MATTSAAPMRPNGVRSDVKRHHIPHLASTLASAFEDDPLLHYLYGPNVGN VYENNEAFFSALLRSELRRVPQHTTIHASQDDGCVAIWNHVGHWDHAESL DFIAAACRIFGTRVVHVANTMKKLKQKHPTEAHMFLSVLGTRKQQQGKGN GSRVISQMLRQCDRDGVAVYLESSNKNNIPFYEKHRFQVVGDISGLPRDC PPVAALWRNPCAQL* back to topspliced messenger RNA >Gchil10256.t1 ID=Gchil10256.t1|Name=Gchil10256.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=645bp|location=Sequence derived from alignment at tig00000065_pilon:151184..151828- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGCCACCACATCCGCCGCCCCCATGCGCCCTAACGGCGTGCGCTCCGA CGTGAAAAGGCACCACATTCCGCATCTCGCCTCCACGTTGGCATCAGCCT TCGAAGACGACCCGTTGCTACATTATCTGTACGGCCCAAACGTCGGAAAC GTCTACGAAAACAATGAAGCTTTCTTTTCCGCTCTTCTTCGTTCAGAGCT GCGTCGCGTGCCACAACACACCACGATTCACGCGTCGCAAGACGACGGCT GCGTCGCCATTTGGAATCATGTGGGGCATTGGGATCACGCCGAAAGTCTG GACTTCATCGCCGCGGCGTGTCGAATTTTCGGAACGCGTGTTGTTCATGT GGCCAACACGATGAAGAAACTAAAACAGAAACACCCCACAGAGGCGCACA TGTTCCTGTCCGTGCTCGGAACACGAAAGCAGCAGCAGGGAAAAGGCAAT GGCAGTAGAGTCATATCGCAAATGTTACGACAGTGCGACCGTGATGGAGT TGCCGTGTACTTGGAGTCTTCGAACAAGAACAACATTCCGTTTTACGAGA AGCATCGCTTCCAGGTTGTCGGAGATATCTCCGGCCTTCCACGCGACTGC CCGCCCGTTGCTGCTCTGTGGCGGAATCCTTGCGCGCAGCTGTAA back to topprotein sequence of Gchil10256.t1 >Gchil10256.t1 ID=Gchil10256.t1|Name=Gchil10256.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=215bp
MATTSAAPMRPNGVRSDVKRHHIPHLASTLASAFEDDPLLHYLYGPNVGN VYENNEAFFSALLRSELRRVPQHTTIHASQDDGCVAIWNHVGHWDHAESL DFIAAACRIFGTRVVHVANTMKKLKQKHPTEAHMFLSVLGTRKQQQGKGN GSRVISQMLRQCDRDGVAVYLESSNKNNIPFYEKHRFQVVGDISGLPRDC PPVAALWRNPCAQL* back to topmRNA from alignment at tig00000065_pilon:151184..151828- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil10256.t1 ID=Gchil10256.t1|Name=Gchil10256.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=645bp|location=Sequence derived from alignment at tig00000065_pilon:151184..151828- (Gracilaria chilensis NLEC103_M9 male) ATGGCCACCACATCCGCCGCCCCCATGCGCCCTAACGGCGTGCGCTCCGA
CGTGAAAAGGCACCACATTCCGCATCTCGCCTCCACGTTGGCATCAGCCT
TCGAAGACGACCCGTTGCTACATTATCTGTACGGCCCAAACGTCGGAAAC
GTCTACGAAAACAATGAAGCTTTCTTTTCCGCTCTTCTTCGTTCAGAGCT
GCGTCGCGTGCCACAACACACCACGATTCACGCGTCGCAAGACGACGGCT
GCGTCGCCATTTGGAATCATGTGGGGCATTGGGATCACGCCGAAAGTCTG
GACTTCATCGCCGCGGCGTGTCGAATTTTCGGAACGCGTGTTGTTCATGT
GGCCAACACGATGAAGAAACTAAAACAGAAACACCCCACAGAGGCGCACA
TGTTCCTGTCCGTGCTCGGAACACGAAAGCAGCAGCAGGGAAAAGGCAAT
GGCAGTAGAGTCATATCGCAAATGTTACGACAGTGCGACCGTGATGGAGT
TGCCGTGTACTTGGAGTCTTCGAACAAGAACAACATTCCGTTTTACGAGA
AGCATCGCTTCCAGGTTGTCGGAGATATCTCCGGCCTTCCACGCGACTGC
CCGCCCGTTGCTGCTCTGTGGCGGAATCCTTGCGCGCAGCTGTAA back to topCoding sequence (CDS) from alignment at tig00000065_pilon:151184..151828- >Gchil10256.t1 ID=Gchil10256.t1|Name=Gchil10256.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=645bp|location=Sequence derived from alignment at tig00000065_pilon:151184..151828- (Gracilaria chilensis NLEC103_M9 male) ATGGCCACCACATCCGCCGCCCCCATGCGCCCTAACGGCGTGCGCTCCGA CGTGAAAAGGCACCACATTCCGCATCTCGCCTCCACGTTGGCATCAGCCT TCGAAGACGACCCGTTGCTACATTATCTGTACGGCCCAAACGTCGGAAAC GTCTACGAAAACAATGAAGCTTTCTTTTCCGCTCTTCTTCGTTCAGAGCT GCGTCGCGTGCCACAACACACCACGATTCACGCGTCGCAAGACGACGGCT GCGTCGCCATTTGGAATCATGTGGGGCATTGGGATCACGCCGAAAGTCTG GACTTCATCGCCGCGGCGTGTCGAATTTTCGGAACGCGTGTTGTTCATGT GGCCAACACGATGAAGAAACTAAAACAGAAACACCCCACAGAGGCGCACA TGTTCCTGTCCGTGCTCGGAACACGAAAGCAGCAGCAGGGAAAAGGCAAT GGCAGTAGAGTCATATCGCAAATGTTACGACAGTGCGACCGTGATGGAGT TGCCGTGTACTTGGAGTCTTCGAACAAGAACAACATTCCGTTTTACGAGA AGCATCGCTTCCAGGTTGTCGGAGATATCTCCGGCCTTCCACGCGACTGC CCGCCCGTTGCTGCTCTGTGGCGGAATCCTTGCGCGCAGCTGTAA back to top
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