Gchil10251.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil10251.t1
Unique NameGchil10251.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length260
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000065_piloncontigtig00000065_pilon:30465..31244 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Properties
Property NameValue
Seed ortholog1206732.BAGD01000070_gene2712
PFAMsAcetyltransf_1
Max annot lvl201174|Actinobacteria
Evalue3.54e-29
EggNOG OGsCOG0454@1|root,COG0456@2|Bacteria,2I9Y3@201174|Actinobacteria,4G0P0@85025|Nocardiaceae
DescriptionAcetyltransferase (GNAT) family
COG categoryK
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10251Gchil10251Gracilaria chilensis NLEC103_M9 malegenetig00000065_pilon 30465..31244 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10251.t1.start1Gchil10251.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000065_pilon 30465..30467 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10251.t1.CDS1Gchil10251.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000065_pilon 30465..31244 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10251.t1.exon1Gchil10251.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000065_pilon 30465..31244 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10251.t1.stop1Gchil10251.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000065_pilon 31242..31244 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10251.t1Gchil10251.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000065_pilon 30465..31244 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil10251.t1 ID=Gchil10251.t1|Name=Gchil10251.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=260bp
MKKATRNSRTPFFLRPVPLHTPPAPPRKASLSRPILPRSPPRRVPYASST
ASVVVRKHTDPTEIEPLALTLASAFEDDPLVSYFYGHDVKDRHRRSMIFN
RTVLRAELSRPSGESVIHVSEDGGCVAVWHYEGHWELSGMYLLRFLMGFI
RCFGWRAFSLASAMKAVEDAHPKEPHMHLFMIGTHQHNRGKGLGSIVISK
MLAECDRERLPAYLESSNERNLSFYRRHGFELLSKVPGLAQDCPAVFGMW
REPQPVRER*
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spliced messenger RNA

>Gchil10251.t1 ID=Gchil10251.t1|Name=Gchil10251.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=780bp|location=Sequence derived from alignment at tig00000065_pilon:30465..31244+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGAAAGCAACCCGCAACAGCCGCACGCCCTTCTTCCTCCGCCCAGT
TCCACTCCATACTCCCCCCGCCCCCCCACGAAAAGCGTCCCTTTCAAGAC
CGATTCTCCCGCGCTCTCCTCCTCGTCGCGTGCCGTATGCGTCTTCTACC
GCCTCCGTCGTCGTGCGCAAACACACCGACCCGACAGAAATCGAGCCGCT
CGCGCTTACGCTAGCTTCGGCATTCGAAGATGATCCTCTAGTGTCCTATT
TTTATGGGCATGATGTGAAAGACCGGCACCGACGTAGCATGATTTTTAAC
AGAACTGTGTTACGTGCAGAGTTGTCGCGGCCAAGTGGAGAGTCGGTCAT
ACATGTATCTGAGGATGGAGGATGTGTTGCAGTGTGGCATTATGAAGGAC
ATTGGGAATTGTCTGGAATGTATCTTCTTCGCTTTCTCATGGGATTCATT
CGTTGTTTTGGATGGCGTGCCTTCTCGCTGGCCTCTGCTATGAAAGCTGT
CGAAGATGCACACCCGAAAGAACCTCATATGCATCTTTTCATGATTGGAA
CGCATCAGCACAATCGTGGAAAAGGGTTGGGATCCATTGTGATTTCAAAA
ATGTTGGCAGAATGTGATAGAGAACGACTTCCGGCGTATCTAGAGAGTTC
TAATGAACGTAATTTGTCATTTTATCGGCGTCATGGCTTTGAGCTGCTAT
CAAAAGTTCCGGGTCTGGCCCAAGATTGTCCTGCGGTATTTGGCATGTGG
AGAGAACCTCAACCGGTTCGCGAACGGTAA
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protein sequence of Gchil10251.t1

>Gchil10251.t1 ID=Gchil10251.t1|Name=Gchil10251.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=260bp
MKKATRNSRTPFFLRPVPLHTPPAPPRKASLSRPILPRSPPRRVPYASST
ASVVVRKHTDPTEIEPLALTLASAFEDDPLVSYFYGHDVKDRHRRSMIFN
RTVLRAELSRPSGESVIHVSEDGGCVAVWHYEGHWELSGMYLLRFLMGFI
RCFGWRAFSLASAMKAVEDAHPKEPHMHLFMIGTHQHNRGKGLGSIVISK
MLAECDRERLPAYLESSNERNLSFYRRHGFELLSKVPGLAQDCPAVFGMW
REPQPVRER*
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mRNA from alignment at tig00000065_pilon:30465..31244+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil10251.t1 ID=Gchil10251.t1|Name=Gchil10251.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=780bp|location=Sequence derived from alignment at tig00000065_pilon:30465..31244+ (Gracilaria chilensis NLEC103_M9 male)
ATGAAGAAAGCAACCCGCAACAGCCGCACGCCCTTCTTCCTCCGCCCAGT
TCCACTCCATACTCCCCCCGCCCCCCCACGAAAAGCGTCCCTTTCAAGAC
CGATTCTCCCGCGCTCTCCTCCTCGTCGCGTGCCGTATGCGTCTTCTACC
GCCTCCGTCGTCGTGCGCAAACACACCGACCCGACAGAAATCGAGCCGCT
CGCGCTTACGCTAGCTTCGGCATTCGAAGATGATCCTCTAGTGTCCTATT
TTTATGGGCATGATGTGAAAGACCGGCACCGACGTAGCATGATTTTTAAC
AGAACTGTGTTACGTGCAGAGTTGTCGCGGCCAAGTGGAGAGTCGGTCAT
ACATGTATCTGAGGATGGAGGATGTGTTGCAGTGTGGCATTATGAAGGAC
ATTGGGAATTGTCTGGAATGTATCTTCTTCGCTTTCTCATGGGATTCATT
CGTTGTTTTGGATGGCGTGCCTTCTCGCTGGCCTCTGCTATGAAAGCTGT
CGAAGATGCACACCCGAAAGAACCTCATATGCATCTTTTCATGATTGGAA
CGCATCAGCACAATCGTGGAAAAGGGTTGGGATCCATTGTGATTTCAAAA
ATGTTGGCAGAATGTGATAGAGAACGACTTCCGGCGTATCTAGAGAGTTC
TAATGAACGTAATTTGTCATTTTATCGGCGTCATGGCTTTGAGCTGCTAT
CAAAAGTTCCGGGTCTGGCCCAAGATTGTCCTGCGGTATTTGGCATGTGG
AGAGAACCTCAACCGGTTCGCGAACGGTAA
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Coding sequence (CDS) from alignment at tig00000065_pilon:30465..31244+

>Gchil10251.t1 ID=Gchil10251.t1|Name=Gchil10251.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=780bp|location=Sequence derived from alignment at tig00000065_pilon:30465..31244+ (Gracilaria chilensis NLEC103_M9 male)
ATGAAGAAAGCAACCCGCAACAGCCGCACGCCCTTCTTCCTCCGCCCAGT
TCCACTCCATACTCCCCCCGCCCCCCCACGAAAAGCGTCCCTTTCAAGAC
CGATTCTCCCGCGCTCTCCTCCTCGTCGCGTGCCGTATGCGTCTTCTACC
GCCTCCGTCGTCGTGCGCAAACACACCGACCCGACAGAAATCGAGCCGCT
CGCGCTTACGCTAGCTTCGGCATTCGAAGATGATCCTCTAGTGTCCTATT
TTTATGGGCATGATGTGAAAGACCGGCACCGACGTAGCATGATTTTTAAC
AGAACTGTGTTACGTGCAGAGTTGTCGCGGCCAAGTGGAGAGTCGGTCAT
ACATGTATCTGAGGATGGAGGATGTGTTGCAGTGTGGCATTATGAAGGAC
ATTGGGAATTGTCTGGAATGTATCTTCTTCGCTTTCTCATGGGATTCATT
CGTTGTTTTGGATGGCGTGCCTTCTCGCTGGCCTCTGCTATGAAAGCTGT
CGAAGATGCACACCCGAAAGAACCTCATATGCATCTTTTCATGATTGGAA
CGCATCAGCACAATCGTGGAAAAGGGTTGGGATCCATTGTGATTTCAAAA
ATGTTGGCAGAATGTGATAGAGAACGACTTCCGGCGTATCTAGAGAGTTC
TAATGAACGTAATTTGTCATTTTATCGGCGTCATGGCTTTGAGCTGCTAT
CAAAAGTTCCGGGTCTGGCCCAAGATTGTCCTGCGGTATTTGGCATGTGG
AGAGAACCTCAACCGGTTCGCGAACGGTAA
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