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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 1206732.BAGD01000070_gene2712 |
PFAMs | Acetyltransf_1 |
Max annot lvl | 201174|Actinobacteria |
Evalue | 3.54e-29 |
EggNOG OGs | COG0454@1|root,COG0456@2|Bacteria,2I9Y3@201174|Actinobacteria,4G0P0@85025|Nocardiaceae |
Description | Acetyltransferase (GNAT) family |
COG category | K |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil10251.t1 ID=Gchil10251.t1|Name=Gchil10251.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=260bp MKKATRNSRTPFFLRPVPLHTPPAPPRKASLSRPILPRSPPRRVPYASST ASVVVRKHTDPTEIEPLALTLASAFEDDPLVSYFYGHDVKDRHRRSMIFN RTVLRAELSRPSGESVIHVSEDGGCVAVWHYEGHWELSGMYLLRFLMGFI RCFGWRAFSLASAMKAVEDAHPKEPHMHLFMIGTHQHNRGKGLGSIVISK MLAECDRERLPAYLESSNERNLSFYRRHGFELLSKVPGLAQDCPAVFGMW REPQPVRER* back to topspliced messenger RNA >Gchil10251.t1 ID=Gchil10251.t1|Name=Gchil10251.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=780bp|location=Sequence derived from alignment at tig00000065_pilon:30465..31244+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGAAGAAAGCAACCCGCAACAGCCGCACGCCCTTCTTCCTCCGCCCAGT TCCACTCCATACTCCCCCCGCCCCCCCACGAAAAGCGTCCCTTTCAAGAC CGATTCTCCCGCGCTCTCCTCCTCGTCGCGTGCCGTATGCGTCTTCTACC GCCTCCGTCGTCGTGCGCAAACACACCGACCCGACAGAAATCGAGCCGCT CGCGCTTACGCTAGCTTCGGCATTCGAAGATGATCCTCTAGTGTCCTATT TTTATGGGCATGATGTGAAAGACCGGCACCGACGTAGCATGATTTTTAAC AGAACTGTGTTACGTGCAGAGTTGTCGCGGCCAAGTGGAGAGTCGGTCAT ACATGTATCTGAGGATGGAGGATGTGTTGCAGTGTGGCATTATGAAGGAC ATTGGGAATTGTCTGGAATGTATCTTCTTCGCTTTCTCATGGGATTCATT CGTTGTTTTGGATGGCGTGCCTTCTCGCTGGCCTCTGCTATGAAAGCTGT CGAAGATGCACACCCGAAAGAACCTCATATGCATCTTTTCATGATTGGAA CGCATCAGCACAATCGTGGAAAAGGGTTGGGATCCATTGTGATTTCAAAA ATGTTGGCAGAATGTGATAGAGAACGACTTCCGGCGTATCTAGAGAGTTC TAATGAACGTAATTTGTCATTTTATCGGCGTCATGGCTTTGAGCTGCTAT CAAAAGTTCCGGGTCTGGCCCAAGATTGTCCTGCGGTATTTGGCATGTGG AGAGAACCTCAACCGGTTCGCGAACGGTAA back to topprotein sequence of Gchil10251.t1 >Gchil10251.t1 ID=Gchil10251.t1|Name=Gchil10251.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=260bp
MKKATRNSRTPFFLRPVPLHTPPAPPRKASLSRPILPRSPPRRVPYASST ASVVVRKHTDPTEIEPLALTLASAFEDDPLVSYFYGHDVKDRHRRSMIFN RTVLRAELSRPSGESVIHVSEDGGCVAVWHYEGHWELSGMYLLRFLMGFI RCFGWRAFSLASAMKAVEDAHPKEPHMHLFMIGTHQHNRGKGLGSIVISK MLAECDRERLPAYLESSNERNLSFYRRHGFELLSKVPGLAQDCPAVFGMW REPQPVRER* back to topmRNA from alignment at tig00000065_pilon:30465..31244+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil10251.t1 ID=Gchil10251.t1|Name=Gchil10251.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=780bp|location=Sequence derived from alignment at tig00000065_pilon:30465..31244+ (Gracilaria chilensis NLEC103_M9 male) ATGAAGAAAGCAACCCGCAACAGCCGCACGCCCTTCTTCCTCCGCCCAGT
TCCACTCCATACTCCCCCCGCCCCCCCACGAAAAGCGTCCCTTTCAAGAC
CGATTCTCCCGCGCTCTCCTCCTCGTCGCGTGCCGTATGCGTCTTCTACC
GCCTCCGTCGTCGTGCGCAAACACACCGACCCGACAGAAATCGAGCCGCT
CGCGCTTACGCTAGCTTCGGCATTCGAAGATGATCCTCTAGTGTCCTATT
TTTATGGGCATGATGTGAAAGACCGGCACCGACGTAGCATGATTTTTAAC
AGAACTGTGTTACGTGCAGAGTTGTCGCGGCCAAGTGGAGAGTCGGTCAT
ACATGTATCTGAGGATGGAGGATGTGTTGCAGTGTGGCATTATGAAGGAC
ATTGGGAATTGTCTGGAATGTATCTTCTTCGCTTTCTCATGGGATTCATT
CGTTGTTTTGGATGGCGTGCCTTCTCGCTGGCCTCTGCTATGAAAGCTGT
CGAAGATGCACACCCGAAAGAACCTCATATGCATCTTTTCATGATTGGAA
CGCATCAGCACAATCGTGGAAAAGGGTTGGGATCCATTGTGATTTCAAAA
ATGTTGGCAGAATGTGATAGAGAACGACTTCCGGCGTATCTAGAGAGTTC
TAATGAACGTAATTTGTCATTTTATCGGCGTCATGGCTTTGAGCTGCTAT
CAAAAGTTCCGGGTCTGGCCCAAGATTGTCCTGCGGTATTTGGCATGTGG
AGAGAACCTCAACCGGTTCGCGAACGGTAA back to topCoding sequence (CDS) from alignment at tig00000065_pilon:30465..31244+ >Gchil10251.t1 ID=Gchil10251.t1|Name=Gchil10251.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=780bp|location=Sequence derived from alignment at tig00000065_pilon:30465..31244+ (Gracilaria chilensis NLEC103_M9 male) ATGAAGAAAGCAACCCGCAACAGCCGCACGCCCTTCTTCCTCCGCCCAGT TCCACTCCATACTCCCCCCGCCCCCCCACGAAAAGCGTCCCTTTCAAGAC CGATTCTCCCGCGCTCTCCTCCTCGTCGCGTGCCGTATGCGTCTTCTACC GCCTCCGTCGTCGTGCGCAAACACACCGACCCGACAGAAATCGAGCCGCT CGCGCTTACGCTAGCTTCGGCATTCGAAGATGATCCTCTAGTGTCCTATT TTTATGGGCATGATGTGAAAGACCGGCACCGACGTAGCATGATTTTTAAC AGAACTGTGTTACGTGCAGAGTTGTCGCGGCCAAGTGGAGAGTCGGTCAT ACATGTATCTGAGGATGGAGGATGTGTTGCAGTGTGGCATTATGAAGGAC ATTGGGAATTGTCTGGAATGTATCTTCTTCGCTTTCTCATGGGATTCATT CGTTGTTTTGGATGGCGTGCCTTCTCGCTGGCCTCTGCTATGAAAGCTGT CGAAGATGCACACCCGAAAGAACCTCATATGCATCTTTTCATGATTGGAA CGCATCAGCACAATCGTGGAAAAGGGTTGGGATCCATTGTGATTTCAAAA ATGTTGGCAGAATGTGATAGAGAACGACTTCCGGCGTATCTAGAGAGTTC TAATGAACGTAATTTGTCATTTTATCGGCGTCATGGCTTTGAGCTGCTAT CAAAAGTTCCGGGTCTGGCCCAAGATTGTCCTGCGGTATTTGGCATGTGG AGAGAACCTCAACCGGTTCGCGAACGGTAA back to top
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