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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 489825.LYNGBM3L_44830 |
PFAMs | TauD |
Max annot lvl | 1117|Cyanobacteria |
KEGG rclass | RC01331 |
KEGG ko | ko:K03119,ko:K22303 |
KEGG Reaction | R05320 |
KEGG Pathway | ko00430,ko00920,map00430,map00920 |
Evalue | 2.79e-80 |
EggNOG OGs | COG2175@1|root,COG2175@2|Bacteria,1G9GI@1117|Cyanobacteria,1HCAY@1150|Oscillatoriales |
EC | 1.14.11.17 |
Description | Taurine catabolism dioxygenase TauD, TfdA family |
COG category | Q |
BRITE | ko00000,ko00001,ko01000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil10147.t1 ID=Gchil10147.t1|Name=Gchil10147.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=490bp METTQQLHISTLKPFGVSIRNLDVNSDAHLLQIRKTLPQNGVIVLPAHSE APGSPLLHHHESLTKLAMLFGKLETTHPINKNVEDSHVQILETMGQTGNI PDSWQFHADMTWRVSPTFASVLCGKLIPPEGGDTCFVETEKMYRRLSPYL QEQLSQLTFVNLLSKSYAISTLKQKAEMVGIHPGVIAHPVSGRPCLFVNE NTTAGSLEMEDEKTEKLLKQIFSEVYSNEHVLCHTWKENDVVIWDNFATQ HLARKDYVDLRRMYRATAENPLYRLERYVDDRGEKEAKQTLGSLFGRKDV QQAYSEIAYWYDHDMNICGYRLPSLAVDVLCQEIDRMNMKANCRILDVAA GTGQNALLLMRDKMTEIEALDICDKMLSEARRKALYRAYYVADANEKLDL RPGSFDIAMCVGGVEPNHIKASSVIGEMVKVVREGGLVLLTVREHDKDSM KEIERLVSADKAKVVRQETGNGVSALGEIRHCIMVLRVL* back to topspliced messenger RNA >Gchil10147.t1 ID=Gchil10147.t1|Name=Gchil10147.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1470bp|location=Sequence derived from alignment at tig00004442_pilon:1323026..1324495+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGAAACTACGCAACAACTCCATATCTCTACGCTAAAACCGTTTGGAGT TAGCATTCGCAACCTTGATGTGAATTCTGACGCCCATCTTCTCCAGATTC GTAAAACGCTCCCACAAAACGGCGTCATCGTTCTGCCTGCCCATTCTGAG GCTCCCGGATCCCCGTTGCTACATCACCATGAAAGTCTAACCAAGCTTGC CATGCTCTTTGGAAAGCTTGAGACCACGCACCCCATCAACAAAAACGTTG AAGACTCCCATGTGCAGATTTTGGAGACCATGGGACAGACCGGAAATATT CCTGACTCGTGGCAGTTCCATGCTGACATGACTTGGAGAGTTAGCCCTAC CTTCGCCAGCGTCCTCTGCGGAAAGCTCATTCCCCCGGAAGGTGGTGATA CGTGCTTCGTAGAAACAGAGAAGATGTATCGAAGACTTTCTCCATATCTT CAAGAACAACTTTCTCAACTTACGTTTGTTAACCTTCTGTCGAAGAGCTA TGCGATCTCTACTCTCAAACAGAAGGCAGAAATGGTTGGTATACACCCCG GTGTTATTGCACATCCAGTTTCCGGCCGCCCATGCCTGTTTGTCAACGAG AATACCACAGCGGGATCTCTAGAGATGGAAGATGAAAAGACTGAGAAATT ACTGAAGCAGATCTTTTCCGAGGTGTATAGCAATGAACACGTTCTCTGTC ATACTTGGAAAGAAAATGATGTCGTCATATGGGATAATTTTGCGACCCAG CACTTGGCAAGAAAAGACTATGTGGATCTCAGAAGAATGTACCGTGCAAC TGCTGAAAACCCCCTCTACCGACTTGAACGCTATGTTGATGATAGAGGAG AGAAAGAAGCAAAACAAACATTGGGTAGTCTCTTCGGCCGAAAGGATGTC CAACAAGCCTACTCTGAAATTGCTTACTGGTATGATCATGACATGAATAT TTGTGGATACCGCCTGCCATCACTCGCCGTTGATGTACTTTGCCAGGAGA TAGACCGCATGAATATGAAGGCTAACTGCAGGATTCTCGATGTAGCCGCC GGTACGGGGCAAAATGCACTTTTGTTGATGCGTGACAAAATGACAGAGAT CGAAGCACTCGATATTTGTGACAAGATGCTAAGTGAGGCGAGAAGGAAGG CATTGTATAGGGCTTACTATGTCGCGGATGCAAATGAAAAACTTGATCTT CGCCCTGGATCGTTCGATATTGCGATGTGCGTAGGAGGGGTCGAACCGAA CCATATCAAGGCCTCCTCGGTGATTGGAGAAATGGTTAAAGTTGTAAGGG AAGGTGGGTTGGTCTTGCTTACCGTTAGAGAGCATGACAAAGACTCAATG AAAGAAATAGAGCGTCTGGTGTCAGCGGATAAGGCCAAAGTTGTGAGACA AGAGACGGGAAACGGCGTTTCTGCTCTTGGCGAAATACGTCACTGCATCA TGGTGCTTCGAGTTCTTTGA back to topprotein sequence of Gchil10147.t1 >Gchil10147.t1 ID=Gchil10147.t1|Name=Gchil10147.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=490bp
METTQQLHISTLKPFGVSIRNLDVNSDAHLLQIRKTLPQNGVIVLPAHSE APGSPLLHHHESLTKLAMLFGKLETTHPINKNVEDSHVQILETMGQTGNI PDSWQFHADMTWRVSPTFASVLCGKLIPPEGGDTCFVETEKMYRRLSPYL QEQLSQLTFVNLLSKSYAISTLKQKAEMVGIHPGVIAHPVSGRPCLFVNE NTTAGSLEMEDEKTEKLLKQIFSEVYSNEHVLCHTWKENDVVIWDNFATQ HLARKDYVDLRRMYRATAENPLYRLERYVDDRGEKEAKQTLGSLFGRKDV QQAYSEIAYWYDHDMNICGYRLPSLAVDVLCQEIDRMNMKANCRILDVAA GTGQNALLLMRDKMTEIEALDICDKMLSEARRKALYRAYYVADANEKLDL RPGSFDIAMCVGGVEPNHIKASSVIGEMVKVVREGGLVLLTVREHDKDSM KEIERLVSADKAKVVRQETGNGVSALGEIRHCIMVLRVL* back to topmRNA from alignment at tig00004442_pilon:1323026..1324495+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil10147.t1 ID=Gchil10147.t1|Name=Gchil10147.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1470bp|location=Sequence derived from alignment at tig00004442_pilon:1323026..1324495+ (Gracilaria chilensis NLEC103_M9 male) ATGGAAACTACGCAACAACTCCATATCTCTACGCTAAAACCGTTTGGAGT
TAGCATTCGCAACCTTGATGTGAATTCTGACGCCCATCTTCTCCAGATTC
GTAAAACGCTCCCACAAAACGGCGTCATCGTTCTGCCTGCCCATTCTGAG
GCTCCCGGATCCCCGTTGCTACATCACCATGAAAGTCTAACCAAGCTTGC
CATGCTCTTTGGAAAGCTTGAGACCACGCACCCCATCAACAAAAACGTTG
AAGACTCCCATGTGCAGATTTTGGAGACCATGGGACAGACCGGAAATATT
CCTGACTCGTGGCAGTTCCATGCTGACATGACTTGGAGAGTTAGCCCTAC
CTTCGCCAGCGTCCTCTGCGGAAAGCTCATTCCCCCGGAAGGTGGTGATA
CGTGCTTCGTAGAAACAGAGAAGATGTATCGAAGACTTTCTCCATATCTT
CAAGAACAACTTTCTCAACTTACGTTTGTTAACCTTCTGTCGAAGAGCTA
TGCGATCTCTACTCTCAAACAGAAGGCAGAAATGGTTGGTATACACCCCG
GTGTTATTGCACATCCAGTTTCCGGCCGCCCATGCCTGTTTGTCAACGAG
AATACCACAGCGGGATCTCTAGAGATGGAAGATGAAAAGACTGAGAAATT
ACTGAAGCAGATCTTTTCCGAGGTGTATAGCAATGAACACGTTCTCTGTC
ATACTTGGAAAGAAAATGATGTCGTCATATGGGATAATTTTGCGACCCAG
CACTTGGCAAGAAAAGACTATGTGGATCTCAGAAGAATGTACCGTGCAAC
TGCTGAAAACCCCCTCTACCGACTTGAACGCTATGTTGATGATAGAGGAG
AGAAAGAAGCAAAACAAACATTGGGTAGTCTCTTCGGCCGAAAGGATGTC
CAACAAGCCTACTCTGAAATTGCTTACTGGTATGATCATGACATGAATAT
TTGTGGATACCGCCTGCCATCACTCGCCGTTGATGTACTTTGCCAGGAGA
TAGACCGCATGAATATGAAGGCTAACTGCAGGATTCTCGATGTAGCCGCC
GGTACGGGGCAAAATGCACTTTTGTTGATGCGTGACAAAATGACAGAGAT
CGAAGCACTCGATATTTGTGACAAGATGCTAAGTGAGGCGAGAAGGAAGG
CATTGTATAGGGCTTACTATGTCGCGGATGCAAATGAAAAACTTGATCTT
CGCCCTGGATCGTTCGATATTGCGATGTGCGTAGGAGGGGTCGAACCGAA
CCATATCAAGGCCTCCTCGGTGATTGGAGAAATGGTTAAAGTTGTAAGGG
AAGGTGGGTTGGTCTTGCTTACCGTTAGAGAGCATGACAAAGACTCAATG
AAAGAAATAGAGCGTCTGGTGTCAGCGGATAAGGCCAAAGTTGTGAGACA
AGAGACGGGAAACGGCGTTTCTGCTCTTGGCGAAATACGTCACTGCATCA
TGGTGCTTCGAGTTCTTTGA back to topCoding sequence (CDS) from alignment at tig00004442_pilon:1323026..1324495+ >Gchil10147.t1 ID=Gchil10147.t1|Name=Gchil10147.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1470bp|location=Sequence derived from alignment at tig00004442_pilon:1323026..1324495+ (Gracilaria chilensis NLEC103_M9 male) ATGGAAACTACGCAACAACTCCATATCTCTACGCTAAAACCGTTTGGAGT TAGCATTCGCAACCTTGATGTGAATTCTGACGCCCATCTTCTCCAGATTC GTAAAACGCTCCCACAAAACGGCGTCATCGTTCTGCCTGCCCATTCTGAG GCTCCCGGATCCCCGTTGCTACATCACCATGAAAGTCTAACCAAGCTTGC CATGCTCTTTGGAAAGCTTGAGACCACGCACCCCATCAACAAAAACGTTG AAGACTCCCATGTGCAGATTTTGGAGACCATGGGACAGACCGGAAATATT CCTGACTCGTGGCAGTTCCATGCTGACATGACTTGGAGAGTTAGCCCTAC CTTCGCCAGCGTCCTCTGCGGAAAGCTCATTCCCCCGGAAGGTGGTGATA CGTGCTTCGTAGAAACAGAGAAGATGTATCGAAGACTTTCTCCATATCTT CAAGAACAACTTTCTCAACTTACGTTTGTTAACCTTCTGTCGAAGAGCTA TGCGATCTCTACTCTCAAACAGAAGGCAGAAATGGTTGGTATACACCCCG GTGTTATTGCACATCCAGTTTCCGGCCGCCCATGCCTGTTTGTCAACGAG AATACCACAGCGGGATCTCTAGAGATGGAAGATGAAAAGACTGAGAAATT ACTGAAGCAGATCTTTTCCGAGGTGTATAGCAATGAACACGTTCTCTGTC ATACTTGGAAAGAAAATGATGTCGTCATATGGGATAATTTTGCGACCCAG CACTTGGCAAGAAAAGACTATGTGGATCTCAGAAGAATGTACCGTGCAAC TGCTGAAAACCCCCTCTACCGACTTGAACGCTATGTTGATGATAGAGGAG AGAAAGAAGCAAAACAAACATTGGGTAGTCTCTTCGGCCGAAAGGATGTC CAACAAGCCTACTCTGAAATTGCTTACTGGTATGATCATGACATGAATAT TTGTGGATACCGCCTGCCATCACTCGCCGTTGATGTACTTTGCCAGGAGA TAGACCGCATGAATATGAAGGCTAACTGCAGGATTCTCGATGTAGCCGCC GGTACGGGGCAAAATGCACTTTTGTTGATGCGTGACAAAATGACAGAGAT CGAAGCACTCGATATTTGTGACAAGATGCTAAGTGAGGCGAGAAGGAAGG CATTGTATAGGGCTTACTATGTCGCGGATGCAAATGAAAAACTTGATCTT CGCCCTGGATCGTTCGATATTGCGATGTGCGTAGGAGGGGTCGAACCGAA CCATATCAAGGCCTCCTCGGTGATTGGAGAAATGGTTAAAGTTGTAAGGG AAGGTGGGTTGGTCTTGCTTACCGTTAGAGAGCATGACAAAGACTCAATG AAAGAAATAGAGCGTCTGGTGTCAGCGGATAAGGCCAAAGTTGTGAGACA AGAGACGGGAAACGGCGTTTCTGCTCTTGGCGAAATACGTCACTGCATCA TGGTGCTTCGAGTTCTTTGA back to top
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