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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 130081.XP_005703260.1 |
PFAMs | CpeS |
Max annot lvl | 2759|Eukaryota |
Evalue | 7.19e-48 |
EggNOG OGs | 28IBS@1|root,2T1HQ@2759|Eukaryota |
Description | CpeS-like protein |
COG category | E |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil10102.t1 ID=Gchil10102.t1|Name=Gchil10102.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=283bp MQCLENTDERIVSLCKDWEVDPERAQGGCYVTWTATMAWDQEGENHEGST VFALIPDEDDNRKGRILRDRGYAEIVPITGTFFLDEHDALNLITPYEGGE VVEKFSFDGPNVVNRMSTVRRFGGFSTATFSTETRLEDNKTEKEDEELDV IALLNEMSFSNVGVSRDSISNESKINKSQFVGGRWGTINSSSKPSSNSAF GSGFVSKTSSKGTEKPSVNSAFGSGFGSSSTSETEKPAVDMNGVSKKSID AATDYGIDLSKVPPSMRQDFAESFDKDPKKST* back to topspliced messenger RNA >Gchil10102.t1 ID=Gchil10102.t1|Name=Gchil10102.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=849bp|location=Sequence derived from alignment at tig00004442_pilon:893375..894223+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGCAATGTTTGGAAAACACCGACGAACGTATTGTTTCACTTTGCAAAGA TTGGGAGGTCGACCCGGAAAGAGCTCAGGGAGGCTGTTATGTCACATGGA CTGCTACAATGGCATGGGATCAAGAAGGGGAGAATCACGAAGGATCAACA GTTTTTGCCTTGATTCCGGACGAAGACGACAATCGTAAGGGTAGAATTCT TCGCGACAGGGGATACGCTGAAATTGTGCCCATCACGGGTACATTCTTTC TCGATGAACACGATGCGCTTAACCTTATTACTCCATACGAAGGTGGTGAA GTTGTCGAAAAATTCTCATTTGACGGGCCGAATGTGGTGAATCGTATGTC AACTGTGCGTCGATTTGGTGGCTTTAGCACAGCTACATTTTCTACGGAAA CGCGTTTGGAAGACAACAAGACAGAGAAGGAAGATGAAGAATTGGATGTA ATTGCATTATTGAACGAAATGTCTTTCTCCAATGTAGGCGTAAGCAGAGA TTCGATTTCTAACGAGTCAAAAATTAACAAATCACAGTTTGTTGGAGGCA GATGGGGTACTATCAATTCATCTTCGAAGCCGTCGTCAAACAGTGCCTTT GGTTCTGGTTTCGTTTCAAAGACTTCTTCGAAGGGTACGGAAAAGCCTTC AGTAAACAGCGCCTTCGGCTCTGGTTTCGGCAGCTCTTCCACCTCGGAGA CAGAGAAACCTGCTGTTGATATGAACGGCGTTTCCAAGAAGAGTATAGAT GCTGCCACAGATTACGGCATTGATCTTTCGAAAGTTCCACCCAGTATGCG TCAAGATTTCGCAGAAAGTTTTGACAAAGATCCCAAGAAATCCACCTAA back to topprotein sequence of Gchil10102.t1 >Gchil10102.t1 ID=Gchil10102.t1|Name=Gchil10102.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=283bp
MQCLENTDERIVSLCKDWEVDPERAQGGCYVTWTATMAWDQEGENHEGST VFALIPDEDDNRKGRILRDRGYAEIVPITGTFFLDEHDALNLITPYEGGE VVEKFSFDGPNVVNRMSTVRRFGGFSTATFSTETRLEDNKTEKEDEELDV IALLNEMSFSNVGVSRDSISNESKINKSQFVGGRWGTINSSSKPSSNSAF GSGFVSKTSSKGTEKPSVNSAFGSGFGSSSTSETEKPAVDMNGVSKKSID AATDYGIDLSKVPPSMRQDFAESFDKDPKKST* back to topmRNA from alignment at tig00004442_pilon:893375..894223+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil10102.t1 ID=Gchil10102.t1|Name=Gchil10102.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=849bp|location=Sequence derived from alignment at tig00004442_pilon:893375..894223+ (Gracilaria chilensis NLEC103_M9 male) ATGCAATGTTTGGAAAACACCGACGAACGTATTGTTTCACTTTGCAAAGA
TTGGGAGGTCGACCCGGAAAGAGCTCAGGGAGGCTGTTATGTCACATGGA
CTGCTACAATGGCATGGGATCAAGAAGGGGAGAATCACGAAGGATCAACA
GTTTTTGCCTTGATTCCGGACGAAGACGACAATCGTAAGGGTAGAATTCT
TCGCGACAGGGGATACGCTGAAATTGTGCCCATCACGGGTACATTCTTTC
TCGATGAACACGATGCGCTTAACCTTATTACTCCATACGAAGGTGGTGAA
GTTGTCGAAAAATTCTCATTTGACGGGCCGAATGTGGTGAATCGTATGTC
AACTGTGCGTCGATTTGGTGGCTTTAGCACAGCTACATTTTCTACGGAAA
CGCGTTTGGAAGACAACAAGACAGAGAAGGAAGATGAAGAATTGGATGTA
ATTGCATTATTGAACGAAATGTCTTTCTCCAATGTAGGCGTAAGCAGAGA
TTCGATTTCTAACGAGTCAAAAATTAACAAATCACAGTTTGTTGGAGGCA
GATGGGGTACTATCAATTCATCTTCGAAGCCGTCGTCAAACAGTGCCTTT
GGTTCTGGTTTCGTTTCAAAGACTTCTTCGAAGGGTACGGAAAAGCCTTC
AGTAAACAGCGCCTTCGGCTCTGGTTTCGGCAGCTCTTCCACCTCGGAGA
CAGAGAAACCTGCTGTTGATATGAACGGCGTTTCCAAGAAGAGTATAGAT
GCTGCCACAGATTACGGCATTGATCTTTCGAAAGTTCCACCCAGTATGCG
TCAAGATTTCGCAGAAAGTTTTGACAAAGATCCCAAGAAATCCACCTAA back to topCoding sequence (CDS) from alignment at tig00004442_pilon:893375..894223+ >Gchil10102.t1 ID=Gchil10102.t1|Name=Gchil10102.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=849bp|location=Sequence derived from alignment at tig00004442_pilon:893375..894223+ (Gracilaria chilensis NLEC103_M9 male) ATGCAATGTTTGGAAAACACCGACGAACGTATTGTTTCACTTTGCAAAGA TTGGGAGGTCGACCCGGAAAGAGCTCAGGGAGGCTGTTATGTCACATGGA CTGCTACAATGGCATGGGATCAAGAAGGGGAGAATCACGAAGGATCAACA GTTTTTGCCTTGATTCCGGACGAAGACGACAATCGTAAGGGTAGAATTCT TCGCGACAGGGGATACGCTGAAATTGTGCCCATCACGGGTACATTCTTTC TCGATGAACACGATGCGCTTAACCTTATTACTCCATACGAAGGTGGTGAA GTTGTCGAAAAATTCTCATTTGACGGGCCGAATGTGGTGAATCGTATGTC AACTGTGCGTCGATTTGGTGGCTTTAGCACAGCTACATTTTCTACGGAAA CGCGTTTGGAAGACAACAAGACAGAGAAGGAAGATGAAGAATTGGATGTA ATTGCATTATTGAACGAAATGTCTTTCTCCAATGTAGGCGTAAGCAGAGA TTCGATTTCTAACGAGTCAAAAATTAACAAATCACAGTTTGTTGGAGGCA GATGGGGTACTATCAATTCATCTTCGAAGCCGTCGTCAAACAGTGCCTTT GGTTCTGGTTTCGTTTCAAAGACTTCTTCGAAGGGTACGGAAAAGCCTTC AGTAAACAGCGCCTTCGGCTCTGGTTTCGGCAGCTCTTCCACCTCGGAGA CAGAGAAACCTGCTGTTGATATGAACGGCGTTTCCAAGAAGAGTATAGAT GCTGCCACAGATTACGGCATTGATCTTTCGAAAGTTCCACCCAGTATGCG TCAAGATTTCGCAGAAAGTTTTGACAAAGATCCCAAGAAATCCACCTAA back to top
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