|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 192875.XP_004365898.1 |
Preferred name | PGM2 |
PFAMs | PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV |
Max annot lvl | 33154|Opisthokonta |
KEGG rclass | RC00017,RC00043,RC00408 |
KEGG ko | ko:K01835,ko:K11809,ko:K15779 |
KEGG Reaction | R00959,R01057,R01660,R02749,R08639 |
KEGG Pathway | ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 |
KEGG Module | M00549 |
GOs | GO:0000271,GO:0000272,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0004614,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0005980,GO:0005996,GO:0006006,GO:0006007,GO:0006012,GO:0006073,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006098,GO:0006112,GO:0006139,GO:0006148,GO:0006152,GO:0006163,GO:0006164,GO:0006165,GO:0006166,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006739,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0008150,GO:0008152,GO:0008617,GO:0008973,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009164,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009250,GO:0009251,GO:0009259,GO:0009260,GO:0009435,GO:0009987,GO:0012505,GO:0015980,GO:0016051,GO:0016052,GO:0016053,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019318,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019388,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019682,GO:0019693,GO:0019752,GO:0030141,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032787,GO:0032940,GO:0033692,GO:0034404,GO:0034637,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034656,GO:0034774,GO:0036230,GO:0042119,GO:0042278,GO:0042451,GO:0042454,GO:0042455,GO:0042866,GO:0043094,GO:0043101,GO:0043170,GO:0043174,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0043436,GO:0044042,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046031,GO:0046034,GO:0046102,GO:0046115,GO:0046128,GO:0046129,GO:0046130,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046903,GO:0046939,GO:0047933,GO:0050896,GO:0051156,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0055086,GO:0055114,GO:0060205,GO:0061615,GO:0061620,GO:0061621,GO:0061718,GO:0070013,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072523,GO:0072524,GO:0072525,GO:0090407,GO:0097708,GO:0099503,GO:0101002,GO:1901068,GO:1901069,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901659,GO:1904813 |
Evalue | 4.32e-123 |
EggNOG OGs | COG1109@1|root,KOG1220@2759|Eukaryota,38FHZ@33154|Opisthokonta |
EC | 2.7.1.106,5.4.2.2,5.4.2.7 |
Description | glucose-1,6-bisphosphate synthase activity |
COG category | G |
BRITE | ko00000,ko00001,ko00002,ko01000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil10100.t1 ID=Gchil10100.t1|Name=Gchil10100.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=665bp MTAPTEEQSPCSVPSDAVSAPSADGDSYSPLTVFFTAAFATACAAILSML LQRRRPRPSPRPHPRSNDPAPLAAPAMCALARAWISIDPDPETRQQVHQM LSDYLQHPSRPTRLTAALDTSNRLRFGTAGLRARVGAGYDRLNCLVILAA AQALANVSNPVSRVVVVGHDARAQSRKFAVLVADVFRLFGAQVKLFSRPV PTPWVAFAVRHYEAALGLCVTASHNPPQDNGLKVFWSDGVQIRPDIANKV ELILKDCSRPWHNYSISDQQLPPLPDPYHDVTEKYFSAITSALYNPITDP NHQKIVYTALHGVGTPFVAEIFRRFQLPPFIPVEEQCAPDPKFPTVPFPN PEEKGALDLAIRTAKRNNARIIIANDPDADRLGIAEIARDGSVRIFTGDE IAVLLTDYLTTHLYKNLSQCGVVASTVSSKILASMARKRGFHFREALTGF KWINKVALDMEFEGMTSILAYEEALGYNVTRNIVCDKDGVSAAAVVAQMV TMIYSAGETLSERLQESITECGNHISRNGYYKLTDSSPSTAAVFESARKG GLPSTLADAVVNSVRDLTCGTDSAESNGIARLPGDTSTQFITFRCSGPSR KGEDCPLVIHLRGSGTEPKIKYYSELRTTAKERDSGSAQRFLKKAVQDAV SKVLRPSENNLHHG* back to topspliced messenger RNA >Gchil10100.t1 ID=Gchil10100.t1|Name=Gchil10100.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1995bp|location=Sequence derived from alignment at tig00004442_pilon:887185..889382+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGACTGCGCCCACAGAGGAGCAGTCTCCATGCTCCGTGCCCTCCGATGC GGTTAGTGCCCCGTCCGCGGATGGCGACTCGTACTCCCCTCTCACCGTCT TCTTCACCGCCGCCTTCGCCACAGCCTGCGCCGCCATCCTCTCAATGCTG CTTCAGcgccgacgcccccgcccaagccccagaccccacccccgctccaa cgatcccgccccGCTTGCAGCTCCTGCCATGTGCGCGTTGGCACGCGCCT GGATTTCTATCGACCCGGATCCTGAAACGCGCCAGCAGGTGCACCAAATG CTTTCCGACTATTTGCAGCACCCTTCGCGACCGACCCGACTCACTGCTGC GCTCGACACCTCAAACCGCCTGCGATTCGGCACCGCTGGCCTGCGTGCGC GCGTGGGAGCTGGGTATGACCGTCTCAATTGCCTTGTGATACTCGCGGCC GCTCAGGCGTTGGCCAACGTTTCCAATCCTGTTTCGCGCGTCGTTGTAGT CGGACATGACGCGAGGGCGCAGTCCAGGAAGTTCGCAGTGTTGGTTGCGG ATGTTTTTCGTCTGTTCGGTGCGCAGGTGAAGCTCTTTTCACGCCCTGTC CCTACTCCATGGGTTGCGTTTGCTGTTCGTCACTACGAGGCCGCCTTGGG TCTATGTGTAACTGCCAGTCACAATCCACCACAAGACAATGGGCTTAAAG TCTTCTGGAGTGATGGTGTCCAGATACGACCAGACATCGCGAACAAAGTG GAACTCATCCTTAAGGACTGCTCAAGACCCTGGCACAACTATTCTATATC GGATCAACAGCTTCCACCTCTTCCTGATCCCTACCACGACGTAACAGAAA AATACTTCTCTGCCATAACCAGCGCTTTGTACAACCCCATTACTGATCCC AACCACCAAAAAATTGTTTACACAGCATTGCATGGCGTTGGCACTCCATT TGTCGCTGAGATCTTCCGTCGCTTTCAATTGCCGCCTTTCATTCCCGTTG AGGAGCAATGCGCACCAGATCCCAAATTCCCAACCGTTCCATTCCCAAAT CCGGAGGAGAAGGGTGCCCTGGACCTAGCCATACGAACCGCCAAACGCAA CAACGCCCGAATTATAATCGCGAACGACCCAGACGCAGATCGTCTCGGAA TTGCCGAGATTGCTCGCGACGGCTCTGTGCGAATATTCACAGGCGATGAA ATAGCTGTTCTGCTCACTGACTACTTGACCACACACTTGTACAAAAATCT GAGTCAGTGTGGTGTGGTCGCCAGCACCGTCTCCTCCAAGATTCTCGCAT CTATGGCGAGAAAGCGAGGTTTTCATTTTCGAGAGGCGCTTACAGGTTTC AAATGGATAAACAAAGTTGCCCTTGACATGGAATTTGAGGGAATGACCTC AATTCTGGCGTATGAAGAGGCGCTCGGATACAATGTCACCAGAAACATTG TCTGTGACAAAGACGGCGTGTCTGCGGCCGCAGTCGTTGCTCAGATGGTA ACGATGATCTACAGCGCCGGTGAAACTCTATCAGAACGGCTGCAAGAATC GATCACAGAATGCGGTAATCACATTTCGAGAAATGGTTATTACAAATTGA CTGATTCTTCACCCAGCACTGCAGCAGTGTTTGAATCTGCGAGAAAAGGA GGATTACCGAGCACGTTGGCGGATGCGGTTGTGAACTCTGTAAGGGACCT CACTTGCGGAACTGATAGCGCTGAATCAAACGGTATCGCTCGACTTCCTG GCGATACATCTACCCAGTTCATTACTTTTCGATGTTCTGGACCCAGTCGC AAAGGCGAAGATTGCCCCCTCGTAATCCATTTGAGAGGAAGTGGCACCGA ACCCAAAATCAAGTACTATTCTGAGCTGCGAACAACGGCTAAGGAGCGCG ACAGTGGGTCTGCGCAACGCTTCTTGAAAAAAGCGGTGCAAGATGCGGTG TCCAAGGTCCTACGCCCTTCCGAAAACAATCTTCACCACGGATAA back to topprotein sequence of Gchil10100.t1 >Gchil10100.t1 ID=Gchil10100.t1|Name=Gchil10100.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=665bp
MTAPTEEQSPCSVPSDAVSAPSADGDSYSPLTVFFTAAFATACAAILSML LQRRRPRPSPRPHPRSNDPAPLAAPAMCALARAWISIDPDPETRQQVHQM LSDYLQHPSRPTRLTAALDTSNRLRFGTAGLRARVGAGYDRLNCLVILAA AQALANVSNPVSRVVVVGHDARAQSRKFAVLVADVFRLFGAQVKLFSRPV PTPWVAFAVRHYEAALGLCVTASHNPPQDNGLKVFWSDGVQIRPDIANKV ELILKDCSRPWHNYSISDQQLPPLPDPYHDVTEKYFSAITSALYNPITDP NHQKIVYTALHGVGTPFVAEIFRRFQLPPFIPVEEQCAPDPKFPTVPFPN PEEKGALDLAIRTAKRNNARIIIANDPDADRLGIAEIARDGSVRIFTGDE IAVLLTDYLTTHLYKNLSQCGVVASTVSSKILASMARKRGFHFREALTGF KWINKVALDMEFEGMTSILAYEEALGYNVTRNIVCDKDGVSAAAVVAQMV TMIYSAGETLSERLQESITECGNHISRNGYYKLTDSSPSTAAVFESARKG GLPSTLADAVVNSVRDLTCGTDSAESNGIARLPGDTSTQFITFRCSGPSR KGEDCPLVIHLRGSGTEPKIKYYSELRTTAKERDSGSAQRFLKKAVQDAV SKVLRPSENNLHHG* back to topmRNA from alignment at tig00004442_pilon:887185..889382+ Legend: polypeptidestart_codonCDSexonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil10100.t1 ID=Gchil10100.t1|Name=Gchil10100.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2198bp|location=Sequence derived from alignment at tig00004442_pilon:887185..889382+ (Gracilaria chilensis NLEC103_M9 male) ATGACTGCGCCCACAGAGGAGCAGTCTCCATGCTCCGTGCCCTCCGATGC
GGTTAGTGCCCCGTCCGCGGATGGCGACTCGTACTCCCCTCTCACCGTCT
TCTTCACCGCCGCCTTCGCCACAGCCTGCGCCGCCATCCTCTCAATGCTG
CTTCAGcgccgacgcccccgcccaagccccagaccccacccccgctccaa
cgatcccgccccGCTTGCAGCTCCTGCCATGTGCGCGTTGGCACGCGCCT
GGATTTCTATCGACCCGGATCCTGAAACGCGCCAGCAGGTGCACCAAATG
CTTTCCGACTATTTGCAGCACCCTTCGCGACCGACCCGACTCACTGCTGC
GCTCGACACCTCAAACCGCCTGCGATTCGGCACCGCTGGCCTGCGTGCGC
GCGTGGGAGCTGGGTATGACCGTCTCAATTGCCTTGTGATACTCGCGGCC
GCTCAGGCGTTGGCCAACGTTTCCAATCCTGTTTCGCGCGTCGTTGTAGT
CGGACATGACGCGAGGGCGCAGTCCAGGAAGTTCGCAGTGTTGGTTGCGG
ATGTTTTTCGTCTGTTCGGTGCGCAGGTGAAGCTCTTTTCACGCCCTGTC
CCTACTCCATGGGTTGCGTTTGCTGTTCGTCACTACGAGGCCGCCTTGGG
TCTATGTGTAACTGCCAGTCACAATCCACCACAAGACAATGGGCTTAAAG
TCTTCTGGAGTGATGGTGTCCAGATACGACCAGACATCGCGAACAAAGTG
GAACTCATCCTTAAGGACTGCTCAAGACCCTGGCACAACTATTCTATATC
GGATCAACAGCTTCCACCTCTTCCTGATCCCTACCACGACGTAACAGAAA
AATACTTCTCTGCCATAACCAGCGCTTTGTACAACCCCATTACTGATCCC
AACCACCAAAAAATTGTTTACACAGCATTGCATGGCGTTGGCACTCCATT
TGTCGCTGAGATCTTCCGTCGCTTTCAATTGCCGCCTTTCATTCCCGTTG
AGGAGCAATGCGCACCAGATCCCAAATTCCCAACCGTTCCATTCCCAAAT
CCGGAGGAGAAGGGTGCCCTGGACCTAGCCATACGAACCGCCAAACGCAA
CAACGCCCGAATTATAATCGCGAACGACCCAGACGCAGATCGTCTCGGAA
TTGCCGAGATTGCTCGCGACGGCTCTGTGCGAATATTCACAGGCGATGAA
ATAGCTGTTCTGCTCACTGACTACTTGACCACACACTTGTACAAAAATCT
GAGTCAGTGTGGTGTGGTCGCCAGCACCGTCTCCTCCAAGATTCTCGCAT
CTATGGCGAGAAAGCGAGGTTTTCATTTTCGAGAGGCGCTTACAGGTTTC
AAATGGATAAACAAAGTTGCCCTTGACATGGAATTTGAGGGAATGACCTC
AATTCTGGCGTATGAAGAGGCGCTCGGATACAATGTCACCAGAAACATTG
TCTGTGACAAAGACGGCGTGTCTGCGGCCGCAGTCGTTGCTCAGATGGTA
ACGATGATCTACAGCGCCGGTGAAACTCTATCAGAACGGCTGCAAGAATC
GATCACAGAATGCGGTAATCACATTTCGAGAAATGGTTATTACAAATTGA
CTGATTCTTCACCCAGCACTGCAGCAGTGTTTGAATCTGCGAGAAAAGGA
GGATTACCGAGCACGTTGGCGGATGCGGTTGTGAACTCTGTAAGGGACCT
CACTTGCGGAACTGATAGCGCTGAATCAAACGGTATCGCTCGACTTCCTG
GCGATACATCTACCCAGTTCATTACTTTTCGATGTTCTGGACCCAGTCGC
AAAGGCGAAGATTGCCCCCTCGTAATCCATTTGAGAGGAAGTGGCACCGG
TAAGTTGCGTAAATCCTTTTCCCGTAGGCATTCAAGGCCAACCTCCAATC
GCCAAGAGGTAGCGCACGAGCATGATTGCCAGAAACTCCATTCTTGTTTC
CACACAGGTTGTTACACACGGTGTCTGGGGACATACTGACTTATGCCTCC
GTATTAATCTTTTTTCATTCACAATATCATGACATTCTCGATACGAATGT
AGAACCCAAAATCAAGTACTATTCTGAGCTGCGAACAACGGCTAAGGAGC
GCGACAGTGGGTCTGCGCAACGCTTCTTGAAAAAAGCGGTGCAAGATGCG
GTGTCCAAGGTCCTACGCCCTTCCGAAAACAATCTTCACCACGGATAA back to topCoding sequence (CDS) from alignment at tig00004442_pilon:887185..889382+ >Gchil10100.t1 ID=Gchil10100.t1|Name=Gchil10100.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1995bp|location=Sequence derived from alignment at tig00004442_pilon:887185..889382+ (Gracilaria chilensis NLEC103_M9 male) ATGACTGCGCCCACAGAGGAGCAGTCTCCATGCTCCGTGCCCTCCGATGC GGTTAGTGCCCCGTCCGCGGATGGCGACTCGTACTCCCCTCTCACCGTCT TCTTCACCGCCGCCTTCGCCACAGCCTGCGCCGCCATCCTCTCAATGCTG CTTCAGcgccgacgcccccgcccaagccccagaccccacccccgctccaa cgatcccgccccGCTTGCAGCTCCTGCCATGTGCGCGTTGGCACGCGCCT GGATTTCTATCGACCCGGATCCTGAAACGCGCCAGCAGGTGCACCAAATG CTTTCCGACTATTTGCAGCACCCTTCGCGACCGACCCGACTCACTGCTGC GCTCGACACCTCAAACCGCCTGCGATTCGGCACCGCTGGCCTGCGTGCGC GCGTGGGAGCTGGGTATGACCGTCTCAATTGCCTTGTGATACTCGCGGCC GCTCAGGCGTTGGCCAACGTTTCCAATCCTGTTTCGCGCGTCGTTGTAGT CGGACATGACGCGAGGGCGCAGTCCAGGAAGTTCGCAGTGTTGGTTGCGG ATGTTTTTCGTCTGTTCGGTGCGCAGGTGAAGCTCTTTTCACGCCCTGTC CCTACTCCATGGGTTGCGTTTGCTGTTCGTCACTACGAGGCCGCCTTGGG TCTATGTGTAACTGCCAGTCACAATCCACCACAAGACAATGGGCTTAAAG TCTTCTGGAGTGATGGTGTCCAGATACGACCAGACATCGCGAACAAAGTG GAACTCATCCTTAAGGACTGCTCAAGACCCTGGCACAACTATTCTATATC GGATCAACAGCTTCCACCTCTTCCTGATCCCTACCACGACGTAACAGAAA AATACTTCTCTGCCATAACCAGCGCTTTGTACAACCCCATTACTGATCCC AACCACCAAAAAATTGTTTACACAGCATTGCATGGCGTTGGCACTCCATT TGTCGCTGAGATCTTCCGTCGCTTTCAATTGCCGCCTTTCATTCCCGTTG AGGAGCAATGCGCACCAGATCCCAAATTCCCAACCGTTCCATTCCCAAAT CCGGAGGAGAAGGGTGCCCTGGACCTAGCCATACGAACCGCCAAACGCAA CAACGCCCGAATTATAATCGCGAACGACCCAGACGCAGATCGTCTCGGAA TTGCCGAGATTGCTCGCGACGGCTCTGTGCGAATATTCACAGGCGATGAA ATAGCTGTTCTGCTCACTGACTACTTGACCACACACTTGTACAAAAATCT GAGTCAGTGTGGTGTGGTCGCCAGCACCGTCTCCTCCAAGATTCTCGCAT CTATGGCGAGAAAGCGAGGTTTTCATTTTCGAGAGGCGCTTACAGGTTTC AAATGGATAAACAAAGTTGCCCTTGACATGGAATTTGAGGGAATGACCTC AATTCTGGCGTATGAAGAGGCGCTCGGATACAATGTCACCAGAAACATTG TCTGTGACAAAGACGGCGTGTCTGCGGCCGCAGTCGTTGCTCAGATGGTA ACGATGATCTACAGCGCCGGTGAAACTCTATCAGAACGGCTGCAAGAATC GATCACAGAATGCGGTAATCACATTTCGAGAAATGGTTATTACAAATTGA CTGATTCTTCACCCAGCACTGCAGCAGTGTTTGAATCTGCGAGAAAAGGA GGATTACCGAGCACGTTGGCGGATGCGGTTGTGAACTCTGTAAGGGACCT CACTTGCGGAACTGATAGCGCTGAATCAAACGGTATCGCTCGACTTCCTG GCGATACATCTACCCAGTTCATTACTTTTCGATGTTCTGGACCCAGTCGC AAAGGCGAAGATTGCCCCCTCGTAATCCATTTGAGAGGAAGTGGCACCGA ACCCAAAATCAAGTACTATTCTGAGCTGCGAACAACGGCTAAGGAGCGCG ACAGTGGGTCTGCGCAACGCTTCTTGAAAAAAGCGGTGCAAGATGCGGTG TCCAAGGTCCTACGCCCTTCCGAAAACAATCTTCACCACGGATAA back to top
|