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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 45157.CMJ185CT |
Preferred name | nuoF |
PFAMs | Complex1_51K,NADH_4Fe-4S,SLBB |
Max annot lvl | 2759|Eukaryota |
KEGG rclass | RC00061 |
KEGG ko | ko:K03942 |
KEGG TC | 3.D.1.6 |
KEGG Reaction | R11945 |
KEGG Pathway | ko00190,ko01100,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04714,map04723,map04932,map05010,map05012,map05016 |
KEGG Module | M00143 |
GOs | GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0016020,GO:0019866,GO:0030964,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045271,GO:0070469,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1902494,GO:1990204 |
Evalue | 1.09e-267 |
EggNOG OGs | COG1894@1|root,KOG2658@2759|Eukaryota |
EC | 1.6.5.3,1.6.99.3 |
Description | FMN binding |
COG category | C |
BRITE | ko00000,ko00001,ko00002,ko01000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil10050.t1 ID=Gchil10050.t1|Name=Gchil10050.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=493bp MALRSAFTLALQRSRGAGSNSVRSLATLRSTTPKQVAAAAPEPTPKSEEA WRVSNYSGSHGGLSDKDRIFTNLYRDGEWRLEGALKRGDWHKTKDLVQMG RDWIINEIKASGLRGRGGAGFPSGLKYSFMPKGNPDGRPNYLVVNADESE PGTCKDREIMRSDPHKLVEGCLIVGRAMSARAAYIYIRGEFIDERKNLEA AVEEAYAKGLLGKNASGSGYDFDVYVTHGAGAYICGEETAMIESLEGKQG KPRLKPPFPANIGLYGCPTTVTNVETVAVVPTILRRGADWFASLGRKGNA GTKLFCISGHVNNPCTVEEEMSVPLRELIDRHCGGVRGGWDNLLAIIPGG SSVQLMPKHICEDVFMDFDSLKAVGSGLGTAAVIVMDKSTDVIAAISRLS YFYKHESCGQCTPCREGTGWLWMLMERMKEGDAKVEEIDMLWEITKQIEG HTICALGDAAAWPVQGVIRHFRPEFERRIAEFEAKNVRATAL* back to topspliced messenger RNA >Gchil10050.t1 ID=Gchil10050.t1|Name=Gchil10050.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1479bp|location=Sequence derived from alignment at tig00004442_pilon:573482..574960+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGGCGTTGAGATCTGCATTCACGCTTGCGCTACAACGCAGTCGTGGCGC CGGCTCAAATTCTGTGCGCTCCCTGGCTACGTTGAGGTCAACCACGCCGA AGCAAGTGGCAGCTGCTGCGCCCGAGCCTACTCCGAAAAGCGAAGAAGCA TGGAGAGTTTCAAACTACTCTGGTTCGCATGGGGGTTTATCGGACAAGGA TCGCATATTCACAAACCTCTACCGCGACGGAGAATGGCGCCTCGAAGGAG CTTTAAAGCGGGGGGATTGGCATAAAACGAAAGACCTCGTACAAATGGGA CGTGATTGGATAATCAATGAAATCAAAGCTTCAGGCCTTCGTGGACGTGG GGGAGCAGGATTTCCTTCAGGACTGAAGTACTCGTTCATGCCCAAAGGAA ACCCTGACGGGAGGCCTAATTACCTGGTCGTCAACGCAGATGAATCTGAG CCAGGAACTTGCAAGGACCGCGAAATCATGCGATCGGATCCTCACAAGCT AGTCGAGGGCTGCCTTATAGTTGGACGAGCTATGAGCGCTCGGGCAGCAT ATATATACATCCGTGGAGAATTCATCGACGAAAGAAAGAACCTCGAAGCA GCGGTTGAGGAAGCTTACGCGAAGGGTCTCCTCGGCAAGAACGCCAGTGG TTCTGGATACGATTTTGATGTTTACGTTACTCATGGCGCCGGTGCGTATA TCTGCGGTGAAGAAACTGCAATGATTGAAAGCTTGGAAGGAAAACAAGGA AAGCCGCGCCTAAAGCCGCCATTCCCTGCAAATATTGGTCTTTACGGATG TCCGACGACGGTGACAAATGTCGAAACAGTCGCCGTTGTGCCCACTATTC TCCGTCGCGGTGCAGATTGGTTTGCCTCATTGGGGCGTAAAGGGAATGCT GGCACGAAGCTGTTCTGTATTTCTGGCCACGTTAACAATCCGTGCACCGT AGAGGAAGAAATGTCGGTGCCATTACGCGAATTGATCGATCGGCACTGTG GAGGTGTCCGTGGAGGATGGGATAATCTACTTGCTATTATCCCTGGAGGC TCCTCTGTTCAGTTAATGCCGAAGCACATCTGTGAGGATGTGTTCATGGA TTTTGATTCATTGAAGGCTGTTGGGTCTGGATTGGGCACTGCAGCTGTCA TTGTTATGGACAAGAGCACCGATGTCATTGCGGCGATTTCACGCCTGTCG TATTTTTACAAGCATGAATCGTGCGGACAGTGCACCCCGTGCCGTGAAGG TACTGGCTGGTTGTGGATGCTCATGGAACGAATGAAAGAAGGAGATGCCA AGGTCGAAGAAATCGATATGCTCTGGGAAATTACCAAGCAGATAGAGGGA CATACTATATGCGCCCTAGGCGATGCCGCTGCCTGGCCTGTTCAAGGGGT AATTCGTCATTTCCGTCCAGAATTTGAAAGACGCATAGCGGAATTCGAAG CCAAAAACGTGCGAGCGACGGCTCTTTGA back to topprotein sequence of Gchil10050.t1 >Gchil10050.t1 ID=Gchil10050.t1|Name=Gchil10050.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=493bp
MALRSAFTLALQRSRGAGSNSVRSLATLRSTTPKQVAAAAPEPTPKSEEA WRVSNYSGSHGGLSDKDRIFTNLYRDGEWRLEGALKRGDWHKTKDLVQMG RDWIINEIKASGLRGRGGAGFPSGLKYSFMPKGNPDGRPNYLVVNADESE PGTCKDREIMRSDPHKLVEGCLIVGRAMSARAAYIYIRGEFIDERKNLEA AVEEAYAKGLLGKNASGSGYDFDVYVTHGAGAYICGEETAMIESLEGKQG KPRLKPPFPANIGLYGCPTTVTNVETVAVVPTILRRGADWFASLGRKGNA GTKLFCISGHVNNPCTVEEEMSVPLRELIDRHCGGVRGGWDNLLAIIPGG SSVQLMPKHICEDVFMDFDSLKAVGSGLGTAAVIVMDKSTDVIAAISRLS YFYKHESCGQCTPCREGTGWLWMLMERMKEGDAKVEEIDMLWEITKQIEG HTICALGDAAAWPVQGVIRHFRPEFERRIAEFEAKNVRATAL* back to topmRNA from alignment at tig00004442_pilon:573482..574960+ Legend: start_codonpolypeptideCDSexonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil10050.t1 ID=Gchil10050.t1|Name=Gchil10050.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1479bp|location=Sequence derived from alignment at tig00004442_pilon:573482..574960+ (Gracilaria chilensis NLEC103_M9 male) ATGGCGTTGAGATCTGCATTCACGCTTGCGCTACAACGCAGTCGTGGCGC
CGGCTCAAATTCTGTGCGCTCCCTGGCTACGTTGAGGTCAACCACGCCGA
AGCAAGTGGCAGCTGCTGCGCCCGAGCCTACTCCGAAAAGCGAAGAAGCA
TGGAGAGTTTCAAACTACTCTGGTTCGCATGGGGGTTTATCGGACAAGGA
TCGCATATTCACAAACCTCTACCGCGACGGAGAATGGCGCCTCGAAGGAG
CTTTAAAGCGGGGGGATTGGCATAAAACGAAAGACCTCGTACAAATGGGA
CGTGATTGGATAATCAATGAAATCAAAGCTTCAGGCCTTCGTGGACGTGG
GGGAGCAGGATTTCCTTCAGGACTGAAGTACTCGTTCATGCCCAAAGGAA
ACCCTGACGGGAGGCCTAATTACCTGGTCGTCAACGCAGATGAATCTGAG
CCAGGAACTTGCAAGGACCGCGAAATCATGCGATCGGATCCTCACAAGCT
AGTCGAGGGCTGCCTTATAGTTGGACGAGCTATGAGCGCTCGGGCAGCAT
ATATATACATCCGTGGAGAATTCATCGACGAAAGAAAGAACCTCGAAGCA
GCGGTTGAGGAAGCTTACGCGAAGGGTCTCCTCGGCAAGAACGCCAGTGG
TTCTGGATACGATTTTGATGTTTACGTTACTCATGGCGCCGGTGCGTATA
TCTGCGGTGAAGAAACTGCAATGATTGAAAGCTTGGAAGGAAAACAAGGA
AAGCCGCGCCTAAAGCCGCCATTCCCTGCAAATATTGGTCTTTACGGATG
TCCGACGACGGTGACAAATGTCGAAACAGTCGCCGTTGTGCCCACTATTC
TCCGTCGCGGTGCAGATTGGTTTGCCTCATTGGGGCGTAAAGGGAATGCT
GGCACGAAGCTGTTCTGTATTTCTGGCCACGTTAACAATCCGTGCACCGT
AGAGGAAGAAATGTCGGTGCCATTACGCGAATTGATCGATCGGCACTGTG
GAGGTGTCCGTGGAGGATGGGATAATCTACTTGCTATTATCCCTGGAGGC
TCCTCTGTTCAGTTAATGCCGAAGCACATCTGTGAGGATGTGTTCATGGA
TTTTGATTCATTGAAGGCTGTTGGGTCTGGATTGGGCACTGCAGCTGTCA
TTGTTATGGACAAGAGCACCGATGTCATTGCGGCGATTTCACGCCTGTCG
TATTTTTACAAGCATGAATCGTGCGGACAGTGCACCCCGTGCCGTGAAGG
TACTGGCTGGTTGTGGATGCTCATGGAACGAATGAAAGAAGGAGATGCCA
AGGTCGAAGAAATCGATATGCTCTGGGAAATTACCAAGCAGATAGAGGGA
CATACTATATGCGCCCTAGGCGATGCCGCTGCCTGGCCTGTTCAAGGGGT
AATTCGTCATTTCCGTCCAGAATTTGAAAGACGCATAGCGGAATTCGAAG
CCAAAAACGTGCGAGCGACGGCTCTTTGA back to topCoding sequence (CDS) from alignment at tig00004442_pilon:573482..574960+ >Gchil10050.t1 ID=Gchil10050.t1|Name=Gchil10050.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1479bp|location=Sequence derived from alignment at tig00004442_pilon:573482..574960+ (Gracilaria chilensis NLEC103_M9 male) ATGGCGTTGAGATCTGCATTCACGCTTGCGCTACAACGCAGTCGTGGCGC CGGCTCAAATTCTGTGCGCTCCCTGGCTACGTTGAGGTCAACCACGCCGA AGCAAGTGGCAGCTGCTGCGCCCGAGCCTACTCCGAAAAGCGAAGAAGCA TGGAGAGTTTCAAACTACTCTGGTTCGCATGGGGGTTTATCGGACAAGGA TCGCATATTCACAAACCTCTACCGCGACGGAGAATGGCGCCTCGAAGGAG CTTTAAAGCGGGGGGATTGGCATAAAACGAAAGACCTCGTACAAATGGGA CGTGATTGGATAATCAATGAAATCAAAGCTTCAGGCCTTCGTGGACGTGG GGGAGCAGGATTTCCTTCAGGACTGAAGTACTCGTTCATGCCCAAAGGAA ACCCTGACGGGAGGCCTAATTACCTGGTCGTCAACGCAGATGAATCTGAG CCAGGAACTTGCAAGGACCGCGAAATCATGCGATCGGATCCTCACAAGCT AGTCGAGGGCTGCCTTATAGTTGGACGAGCTATGAGCGCTCGGGCAGCAT ATATATACATCCGTGGAGAATTCATCGACGAAAGAAAGAACCTCGAAGCA GCGGTTGAGGAAGCTTACGCGAAGGGTCTCCTCGGCAAGAACGCCAGTGG TTCTGGATACGATTTTGATGTTTACGTTACTCATGGCGCCGGTGCGTATA TCTGCGGTGAAGAAACTGCAATGATTGAAAGCTTGGAAGGAAAACAAGGA AAGCCGCGCCTAAAGCCGCCATTCCCTGCAAATATTGGTCTTTACGGATG TCCGACGACGGTGACAAATGTCGAAACAGTCGCCGTTGTGCCCACTATTC TCCGTCGCGGTGCAGATTGGTTTGCCTCATTGGGGCGTAAAGGGAATGCT GGCACGAAGCTGTTCTGTATTTCTGGCCACGTTAACAATCCGTGCACCGT AGAGGAAGAAATGTCGGTGCCATTACGCGAATTGATCGATCGGCACTGTG GAGGTGTCCGTGGAGGATGGGATAATCTACTTGCTATTATCCCTGGAGGC TCCTCTGTTCAGTTAATGCCGAAGCACATCTGTGAGGATGTGTTCATGGA TTTTGATTCATTGAAGGCTGTTGGGTCTGGATTGGGCACTGCAGCTGTCA TTGTTATGGACAAGAGCACCGATGTCATTGCGGCGATTTCACGCCTGTCG TATTTTTACAAGCATGAATCGTGCGGACAGTGCACCCCGTGCCGTGAAGG TACTGGCTGGTTGTGGATGCTCATGGAACGAATGAAAGAAGGAGATGCCA AGGTCGAAGAAATCGATATGCTCTGGGAAATTACCAAGCAGATAGAGGGA CATACTATATGCGCCCTAGGCGATGCCGCTGCCTGGCCTGTTCAAGGGGT AATTCGTCATTTCCGTCCAGAATTTGAAAGACGCATAGCGGAATTCGAAG CCAAAAACGTGCGAGCGACGGCTCTTTGA back to top
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