Gchil10037.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil10037.t1
Unique NameGchil10037.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length349
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004442_piloncontigtig00004442_pilon:507673..508719 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10037Gchil10037Gracilaria chilensis NLEC103_M9 malegenetig00004442_pilon 507673..508719 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10037.t1.stop1Gchil10037.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004442_pilon 507673..507675 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10037.t1.CDS1Gchil10037.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004442_pilon 507673..508719 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10037.t1.exon1Gchil10037.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004442_pilon 507673..508719 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10037.t1.start1Gchil10037.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004442_pilon 508717..508719 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10037.t1Gchil10037.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004442_pilon 507673..508719 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil10037.t1 ID=Gchil10037.t1|Name=Gchil10037.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=349bp
MQAPVPPRPPSPANLSHQLCIESALASLESALRRGIQPDSLATFHPLEKL
ADLYLERPTGHRLDNIDRALASYSLASRTAASALQPSADLDSARLSAKLA
HSWYLRLQYVSHHCVDVPLVKRAHLSAAADAIDIALQRYDDCGDWQHDVH
QRLLYNHALLCKGFIYHAMCANVHLQISCDAHADPRDLEHKQSLWRRVYV
NSCIQSLEKALLSDASKLPPKSSQHHSALNQTDQNPSSPNHSQPTSNHFV
QIFPVQHDVQNVTKARAIICLARAYVDTSNIVAEKVSKTLKLLDGVEKLL
DKVDVNKHHDGFIVMEDDVQRMREDAKCLQQSLKQNCSTPSQGGCVIS*
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spliced messenger RNA

>Gchil10037.t1 ID=Gchil10037.t1|Name=Gchil10037.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1047bp|location=Sequence derived from alignment at tig00004442_pilon:507673..508719- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGGCGCCCGTCCCCCCGCGCCCGCCGTCGCCCGCCAACCTCTCACA
CCAGCTATGTATCGAGAGTGCACTTGCGTCGCTTGAGAGCGCGTTGCGCC
GCGGTATTCAGCCCGACTCGCTTGCTACCTTTCATCCGCTCGAAAAGTTG
GCCGACCTCTACCTGGAACGCCCCACTGGCCACCGCCTGGATAACATCGA
TCGCGCCCTTGCTTCTTACTCGCTCGCTTCAAGGACCGCCGCTAGTGCCT
TGCAGCCCTCTGCCGACCTTGATAGCGCCAGGTTGTCCGCCAAGCTAGCA
CACTCTTGGTACTTGAGGTTGCAGTATGTTTCGCATCATTGTGTTGATGT
CCCGCTCGTTAAGCGCGCCCATCTCAGCGCTGCTGCGGATGCCATCGATA
TTGCCTTGCAGCGTTATGATGACTGTGGTGATTGGCAGCACGATGTCCAT
CAACGGCTTTTGTATAACCACGCCTTGCTGTGTAAGGGCTTTATTTACCA
TGCCATGTGTGCCAACGTTCACCTTCAAATCTCGTGTGATGCCCACGCCG
ATCCGCGTGACCTTGAACACAAACAGAGCTTGTGGCGACGCGTGTACGTC
AATAGTTGCATTCAATCTTTGGAAAAAGCTCTCTTGTCGGATGCTTCCAA
ATTGCCGCCCAAATCATCTCAACATCATTCTGCTCTCAATCAAACCGACC
AAAACCCCTCTTCGCCAAACCACTCCCAGCCTACTTCTAATCACTTTGTA
CAAATATTTCCCGTTCAACATGATGTGCAAAACGTCACAAAGGCACGAGC
CATTATTTGTCTGGCGCGCGCATATGTCGATACCTCAAATATCGTGGCTG
AAAAAGTGTCCAAGACCTTGAAATTGCTGGACGGTGTAGAAAAATTGTTG
GACAAAGTCGATGTCAACAAGCATCATGACGGCTTTATTGTCATGGAGGA
TGACGTGCAACGCATGAGGGAGGATGCAAAATGCCTTCAGCAGTCGCTCA
AACAGAACTGTTCGACGCCCTCTCAGGGTGGCTGTGTCATATCGTAG
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protein sequence of Gchil10037.t1

>Gchil10037.t1 ID=Gchil10037.t1|Name=Gchil10037.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=349bp
MQAPVPPRPPSPANLSHQLCIESALASLESALRRGIQPDSLATFHPLEKL
ADLYLERPTGHRLDNIDRALASYSLASRTAASALQPSADLDSARLSAKLA
HSWYLRLQYVSHHCVDVPLVKRAHLSAAADAIDIALQRYDDCGDWQHDVH
QRLLYNHALLCKGFIYHAMCANVHLQISCDAHADPRDLEHKQSLWRRVYV
NSCIQSLEKALLSDASKLPPKSSQHHSALNQTDQNPSSPNHSQPTSNHFV
QIFPVQHDVQNVTKARAIICLARAYVDTSNIVAEKVSKTLKLLDGVEKLL
DKVDVNKHHDGFIVMEDDVQRMREDAKCLQQSLKQNCSTPSQGGCVIS*
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mRNA from alignment at tig00004442_pilon:507673..508719-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil10037.t1 ID=Gchil10037.t1|Name=Gchil10037.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1047bp|location=Sequence derived from alignment at tig00004442_pilon:507673..508719- (Gracilaria chilensis NLEC103_M9 male)
ATGCAGGCGCCCGTCCCCCCGCGCCCGCCGTCGCCCGCCAACCTCTCACA
CCAGCTATGTATCGAGAGTGCACTTGCGTCGCTTGAGAGCGCGTTGCGCC
GCGGTATTCAGCCCGACTCGCTTGCTACCTTTCATCCGCTCGAAAAGTTG
GCCGACCTCTACCTGGAACGCCCCACTGGCCACCGCCTGGATAACATCGA
TCGCGCCCTTGCTTCTTACTCGCTCGCTTCAAGGACCGCCGCTAGTGCCT
TGCAGCCCTCTGCCGACCTTGATAGCGCCAGGTTGTCCGCCAAGCTAGCA
CACTCTTGGTACTTGAGGTTGCAGTATGTTTCGCATCATTGTGTTGATGT
CCCGCTCGTTAAGCGCGCCCATCTCAGCGCTGCTGCGGATGCCATCGATA
TTGCCTTGCAGCGTTATGATGACTGTGGTGATTGGCAGCACGATGTCCAT
CAACGGCTTTTGTATAACCACGCCTTGCTGTGTAAGGGCTTTATTTACCA
TGCCATGTGTGCCAACGTTCACCTTCAAATCTCGTGTGATGCCCACGCCG
ATCCGCGTGACCTTGAACACAAACAGAGCTTGTGGCGACGCGTGTACGTC
AATAGTTGCATTCAATCTTTGGAAAAAGCTCTCTTGTCGGATGCTTCCAA
ATTGCCGCCCAAATCATCTCAACATCATTCTGCTCTCAATCAAACCGACC
AAAACCCCTCTTCGCCAAACCACTCCCAGCCTACTTCTAATCACTTTGTA
CAAATATTTCCCGTTCAACATGATGTGCAAAACGTCACAAAGGCACGAGC
CATTATTTGTCTGGCGCGCGCATATGTCGATACCTCAAATATCGTGGCTG
AAAAAGTGTCCAAGACCTTGAAATTGCTGGACGGTGTAGAAAAATTGTTG
GACAAAGTCGATGTCAACAAGCATCATGACGGCTTTATTGTCATGGAGGA
TGACGTGCAACGCATGAGGGAGGATGCAAAATGCCTTCAGCAGTCGCTCA
AACAGAACTGTTCGACGCCCTCTCAGGGTGGCTGTGTCATATCGTAG
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Coding sequence (CDS) from alignment at tig00004442_pilon:507673..508719-

>Gchil10037.t1 ID=Gchil10037.t1|Name=Gchil10037.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1047bp|location=Sequence derived from alignment at tig00004442_pilon:507673..508719- (Gracilaria chilensis NLEC103_M9 male)
ATGCAGGCGCCCGTCCCCCCGCGCCCGCCGTCGCCCGCCAACCTCTCACA
CCAGCTATGTATCGAGAGTGCACTTGCGTCGCTTGAGAGCGCGTTGCGCC
GCGGTATTCAGCCCGACTCGCTTGCTACCTTTCATCCGCTCGAAAAGTTG
GCCGACCTCTACCTGGAACGCCCCACTGGCCACCGCCTGGATAACATCGA
TCGCGCCCTTGCTTCTTACTCGCTCGCTTCAAGGACCGCCGCTAGTGCCT
TGCAGCCCTCTGCCGACCTTGATAGCGCCAGGTTGTCCGCCAAGCTAGCA
CACTCTTGGTACTTGAGGTTGCAGTATGTTTCGCATCATTGTGTTGATGT
CCCGCTCGTTAAGCGCGCCCATCTCAGCGCTGCTGCGGATGCCATCGATA
TTGCCTTGCAGCGTTATGATGACTGTGGTGATTGGCAGCACGATGTCCAT
CAACGGCTTTTGTATAACCACGCCTTGCTGTGTAAGGGCTTTATTTACCA
TGCCATGTGTGCCAACGTTCACCTTCAAATCTCGTGTGATGCCCACGCCG
ATCCGCGTGACCTTGAACACAAACAGAGCTTGTGGCGACGCGTGTACGTC
AATAGTTGCATTCAATCTTTGGAAAAAGCTCTCTTGTCGGATGCTTCCAA
ATTGCCGCCCAAATCATCTCAACATCATTCTGCTCTCAATCAAACCGACC
AAAACCCCTCTTCGCCAAACCACTCCCAGCCTACTTCTAATCACTTTGTA
CAAATATTTCCCGTTCAACATGATGTGCAAAACGTCACAAAGGCACGAGC
CATTATTTGTCTGGCGCGCGCATATGTCGATACCTCAAATATCGTGGCTG
AAAAAGTGTCCAAGACCTTGAAATTGCTGGACGGTGTAGAAAAATTGTTG
GACAAAGTCGATGTCAACAAGCATCATGACGGCTTTATTGTCATGGAGGA
TGACGTGCAACGCATGAGGGAGGATGCAAAATGCCTTCAGCAGTCGCTCA
AACAGAACTGTTCGACGCCCTCTCAGGGTGGCTGTGTCATATCGTAG
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