Gcaud7862.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7862.t1
Unique NameGcaud7862.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1427
Homology
BLAST of Gcaud7862.t1 vs. uniprot
Match: A0A2V3IKR9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKR9_9FLOR)

HSP 1 Score: 818 bits (2112), Expect = 6.120e-269
Identity = 603/1479 (40.77%), Postives = 837/1479 (56.59%), Query Frame = 0
Query:    1 MPRNSVKKRREVFDPNAFEFTGEEAIQADKAAKSRPTYRRQKLSILSALPDVPNPFTTLADRPVLTFTSAE--DTAKRDVHNQHEFKSTPRRAQHSIGVSRRETKRTKRGRERTVLRTKPKLVKRKPSLEAIVSLSIKREVTPDPPVPSTQSATQDSSEASGALRRSGRKRYRTAKALQVYEESR------KKPRTQKRR--RGRSDIDPKTNTQGTGIGPECVLECGESLQEEKNPSKTEVT-QPVHE----------GNSELHAKALGERKSSSDIEQVDQPKEKESSEMFSQ--RKRDSLLEDKSDKSNSEIDSETHAAIENMSDRMIHQNESRPFSLPAGRPRSPAEGNNVDESQTQDLEPRCLTTKPSMAQLDEEQPSGYR-------------QPNTADRKSNMQQSSISDKTRKEDSSNSTGFHVQKEESQDSRKQRGDIAPNMEVEPS--PLRTVTNPMEKDQ---DSSLFVSPVTPTQPKNGGLGCISDPKVAESKMRDAAEGQNLPHGLKIKESTTSSEAPTSVTTSVQCMKPETPVSFASGLDGQHGCVSTTEQKSEAQSRSPQTNEGCGQIQEPSSSQMGKASLRRGD---MASAVVPRCEDTTRFATPKPAKAMT--DGSANHAR-----------EMVLQDDEVSEVHEYEREP-------NHNFTAEEELKNTRSEHSMKPPEQATPMQSVAEITAPSEDKVQSLRRNME-RTGSPEMKTDLSTNLT----KCQTEGSIEEMQH------------ESLSLGRPAKHTQRGSVDAQFP-QKDIARSSSEATHIDSDKRCKSFATASLGKREIEEECNVPIITTNHGECKTTQNAKLSLQESRKGKQTFSKRVRFVEPEKSSLPSVGRKGCSDIMKMRMRKARRRQMTPLVPNGPNVTVMTMRGSGPNEKERRVYLDELQYLLDGVFKPSGKAEEKSPQLESQLISKTLISLTQLLMRKSREVSSSEEDESDSALIQILSTQPALFRSMVSQLCGVFGKSRSIDAMLAVVFVLIFRATPKLCLINAVELDILLNAFFRSSAAALKENEEESTKKSLTAKEGKGVDTKKRRGRLAKRFEESEAESSVLSALNKVVMEASIAEE-FSGFKNEAVAGSHLIAMALSLVMCFHGNLRSLMRENRRLDKVVAVLYSCEKLLVQKTGSNAEEKKLHFVHNEASTSWVVLGASLKVLEFAILDKVCQVKTARESRLCAIVVDVIRSVKCLREGMFGSEWILSAALRVAINLCHGFGEASRQFVKQKGHELALMWVTKECYVAGLLSGEHEHHCTDGIHESFDVRVLCLALLATVVDQERDICGQFHTLNVTGFKERISGGLQIAIEVLQAAETSLETADEEAQAKDDEEAGRRRPPDTSERKHLTERAEQVLERRITIGYASLLVGALVHENVKNREMAEKLIPSNNLIGIAAVLTGFLEFHHEVGIISGSMDRMYARIIDSLVKPFHREDT 1396
            MPR S KKR +  + NAFEFTGEEA+QADK A++RPT++RQK+SILS LPD       LA +P     + E  D  K  + ++ E K    R   S    + +        ++ + R   + V R+ S E++V+  IKREVTPDPP       TQ+SSEAS A RRSGRKR+RT KA   YE++R      K+ RT ++   R    +  + NT  +  G E V +  E+L  + +     +  +PV++          G+ E+      E  + ++ E+  +    ++   F+   RKRD                ET AA++        ++ +  F+    RP S   G   D       +      K      D++Q S  R              P      S++  S      +++   +     ++ +ES+  +  + +   + E +     LR  ++P  + Q   D SL  SPVTP   +                 +D AE        K    T +  A  S T      K E  VS  + ++ +   +S    + E+Q R  +  EG        +SQ  K + +R     M+S  + + +  TR +T +  K  +  DG   H             ++ +  DE  +    E +        N  + + + + +  +  S  P E++    S++      +   +S RR  +  T  PE+ T++  N T    K  T  + E +              +S  L  P+ +  + + + Q P Q+ +  ++ E T I+        +  S GK++I E  NVP  T      K +Q  + ++Q   K KQTFSKRVRF+EP+ S+L    R+  S I+KM++RKARRRQ++ +  +GP+V+VMT   + PN KE R+ LDELQYLLDG+FKPSG + +KSPQLESQLI+KTL+SL  LL RK  +  S E  E +SA+IQIL  QP+LF+++V +LC VFGKSRS+DA+LAVVFVLIFR TPKL LI A ELDILLNAFFRSSAAALK+++  +T KS + KEG   D K+RRGRLAKRFEE+  + S LS LNKVV EASI E+ F+GFK E V  +HLI +A+SL++CF   LR  MRENRRLD++VAVLYSCEK+++QKT   +E+++L F + E ST W+VLGASL+VLEF +LD+VCQ +TARESRLCAIVVDVIR V  + EG FG EWILSAALRVAINLCHGFGEASRQFV++ GH+LALMWV KEC  AGLL+   E    +   +SFDVRVLCLALLAT+VDQE  IC  FHT+NV G K+R +GGL+I +E+LQAAE  +E ++EE     +    + R  D    +H  E++E V+E +ITIGYASLL+GALV +NV+NR++AE LIPS+NL+G+AAVLT FLEFHHEVGIISGSMDRMYARII SLVKPF   ++
Sbjct:    1 MPRKSTKKRGKSAEQNAFEFTGEEAVQADKEARARPTFKRQKISILSTLPDATQRLAALAKKPFFCTRTDEQDDGQKTTLESKRESKPRLERRSVSYHGPKIQKNYASLDTQKFMNRKTRQSVNRRASTESVVTPPIKREVTPDPPT--MPGGTQESSEASSAPRRSGRKRFRTTKAYLAYEDARRHIGGKKRVRTTEQEGVRNNRTLSKRENTPKSA-GVERVSKGKEALASQSSKMIEPMPMEPVNDKPKTGGGGEDGDIEIPRTKPSEHTAGTNSEESGKGTRVQTQNNFASVARKRDGR--------------ETSAAVKT-------EHSANVFTDAHQRPSS-VHGTAQDPEHVGHKKSNMALKKAIGTDKDQQQGSTTRGVEVHGTAVIKQVSPTCLGPGSDLPLSGACTDNQEQIQRSQAFVDIEDQESEPGKHAKSNSGGDSEADTKLDQLRGKSDPHAEHQNISDDSLIESPVTPVNSR-----------------KDPAEVA------KAHVQTLNIHAENSGT------KDEKSVSAVALVNRR---LSLDAGEMESQDRKAENREG-------ETSQSRKENAQRPGSECMSSPKMVKRDRETRLSTSEICKLSSTKDGEVRHNSPCEEKIGGFDPDVSVSVDEPQDSKGMEPDTLGSDLSENKGYPSLKMMNSKTATRSKGPGEKSKSTLSLSRQLGTDKSISESDRRRTQVNTVVPEIVTEVLNNCTSAAKKDATSKNTEILARGQEKDSPLCSVWDSYVLADPSVNALQQNTERQDPSQETVNPTTREETCIEPTG---PSSLNSGGKQQITERANVPFKTVPDETMKASQKPQAAVQHVEKTKQTFSKRVRFLEPDASTLSRDSRRDLSGILKMKLRKARRRQVSFI--DGPDVSVMTGHATEPNGKEERMLLDELQYLLDGIFKPSGNSGKKSPQLESQLIAKTLVSLISLLKRKPHQKMSKEGGEHESAMIQILLKQPSLFKTIVGKLCSVFGKSRSVDAVLAVVFVLIFRETPKLRLIEAPELDILLNAFFRSSAAALKDDDVGNTSKSQS-KEGAAPDVKRRRGRLAKRFEETNTDDSFLSTLNKVVSEASIIEDDFNGFKGETVGAAHLIGIAISLILCFDSKLRLWMRENRRLDRIVAVLYSCEKVMLQKTSPASEQRRLQFTNKEVSTPWIVLGASLRVLEFTVLDEVCQSRTARESRLCAIVVDVIRGVHQVNEGPFGGEWILSAALRVAINLCHGFGEASRQFVQKGGHKLALMWVVKECNAAGLLTSGVEGLKENDCEQSFDVRVLCLALLATIVDQEEHICNVFHTMNVPGLKKRKAGGLEIVLEILQAAEAVVERSEEEFVTNHNLSELKPRRGDIQTDEHC-EKSELVMETKITIGYASLLLGALVRDNVQNRKIAEDLIPSHNLVGVAAVLTEFLEFHHEVGIISGSMDRMYARIISSLVKPFQAAES 1408          
BLAST of Gcaud7862.t1 vs. uniprot
Match: R7QFW7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFW7_CHOCR)

HSP 1 Score: 340 bits (873), Expect = 8.790e-94
Identity = 230/633 (36.33%), Postives = 364/633 (57.50%), Query Frame = 0
Query:  778 KQTFSKRVRFVEPEKSSLPSVGRKGCSDIMKMRMRKARRRQMTPLVPNGPNVTVMTMRGSGPNEKERRVYLDELQYLLDGVFKPSGKAEEKSPQLESQLISKTLISLTQLLMRKSREVSSSEEDESDS---ALIQILSTQPALFRSMVSQLCGVFGKSRSIDAMLAVVFVLIFRATPKLCLINAVELDILLNAFFRSSAAALKENEEESTKKSLTAKEGKGVDTKKRRGRLA--KRFEESEAESSVLSALNKVVMEASIAEE-FSGFKNEAVAGSHLIAMALSLVMCFHGNLRSLMRENRRLDKVVAVLYSCEKLLV----QKTGSNAEEKKLHFVHNEASTSWVVLGAS-LKVLEFAILDKVCQVKTARESRLCAIVVDVIRSVKCLREGMFGSEWILSAALRVAINLCHGFGEASRQFVKQKGHELALMWVTKECYVAGLLSGEHEHHCTDGIHESFDVRVLCLALLATVVDQERDICGQFHTLNVTGFKERISGGLQIAIEVLQ----------AAETSLETADEEAQAKDDEEAGRRRPPDTSERKHLTERAEQVLERRITIGYASLLVGALVHENVKNREMAEKLIPSNNLIGIAAVLTGFLEFHHEVGIISGSMDRMYARIIDSLVK 1389
            K + +KRVRF+EP++++  SV R      MK + R  R R         P+V V+    SGP+EK R+V LDELQY+LDG+FK +G+ ++K   +   LI  +L  LTQLL+RK     + E+ + D     ++QIL+TQPAL +S+V  L  + G SR++D ++++VFV++FR+T ++  +    LD L+  F R+ A +LK+     T+     K G+ +   + +GR A  +R  +++ +   L+ +N+V+ +A I +E F GF  E    +HL+A+ALSL++  H   R  MR N+R+ KVVAVLYSC+K L     Q + S   + +L     E   +  ++ AS ++VLEF+ LD+ C+++ A ESR+C +++D I S   L  G+  ++ ++  ALR+AINL H     +++FVKQ G ++ L  +  EC  AGL+ G +    ++   E+FDVRVLCLA L +++D+E ++   F  L      ER  G + + +E+L+           A+   +TA EEA       A  +R  D S    +       +E +IT GY  LL+GAL H+   N+E  +  +P  +++G+AAVL  FL+FHHEVG+ S +MD  Y  II +LVK
Sbjct:  476 KSSPAKRVRFIEPQRANR-SV-RMNLHSFMKRKRRHERVR--------APDVAVVPSARSGPDEKSRQVLLDELQYVLDGIFKYAGRKDKKPATVS--LIKNSLQELTQLLLRKPNRPKADEDTQLDDDCGVVLQILATQPALLKSIVVGLFRILGMSRAVDLLVSLVFVIMFRSTVRILDVEENFLDSLIAGFLRNGAESLKQVSVAGTESEH--KHGRNISKSEAQGRNAFGRRLSDNKKDEKFLAHVNEVIRKAGIKDEDFEGFNCEPDGSAHLMALALSLLLEGHDKAREWMRNNQRVHKVVAVLYSCQKALQGKSKQSSDSQESDSQLQAEEFEEHVALSLVTASAMRVLEFSTLDQACRLRVATESRICRVILDFIASACALEGGVVSADPLICQALRLAINLAHDCKPGTQEFVKQGGPQVVLDCLASECIGAGLIEGSNPESESE---EAFDVRVLCLAFLISILDKEDEVREGFKKLCARDVPEREGGAITLVLELLKNVGKKQIEKMEAKNREKTATEEA-------AKIKRGLDRSSEDEVENGG--AMEEKITTGYICLLLGALAHDCEGNKEFMKAALPQQSMLGVAAVLKEFLDFHHEVGVTSVAMDERYRSIISNLVK 1082          
The following BLAST results are available for this feature:
BLAST of Gcaud7862.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IKR9_9FLOR6.120e-26940.77Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QFW7_CHOCR8.790e-9436.33Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1265..1292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 630..648
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 613..667
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 380..412
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 243..302
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1402..1418
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 478..503
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 351..379
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1402..1426
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 329..344
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 613..629
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1280..1310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 514..553
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1289..1310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..562
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 426..450
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1044..1063
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1064..1426
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..1043
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 832..1389
e-value: 7.1E-23
score: 82.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_354_length_28917_cov_4.522861contigNODE_354_length_28917_cov_4.522861:17706..21986 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7862.t1Gcaud7862.t1Gracilaria caudata M_176_S67 malemRNANODE_354_length_28917_cov_4.522861 17706..21986 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7862.t1 ID=Gcaud7862.t1|Name=Gcaud7862.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1427bp
MPRNSVKKRREVFDPNAFEFTGEEAIQADKAAKSRPTYRRQKLSILSALP
DVPNPFTTLADRPVLTFTSAEDTAKRDVHNQHEFKSTPRRAQHSIGVSRR
ETKRTKRGRERTVLRTKPKLVKRKPSLEAIVSLSIKREVTPDPPVPSTQS
ATQDSSEASGALRRSGRKRYRTAKALQVYEESRKKPRTQKRRRGRSDIDP
KTNTQGTGIGPECVLECGESLQEEKNPSKTEVTQPVHEGNSELHAKALGE
RKSSSDIEQVDQPKEKESSEMFSQRKRDSLLEDKSDKSNSEIDSETHAAI
ENMSDRMIHQNESRPFSLPAGRPRSPAEGNNVDESQTQDLEPRCLTTKPS
MAQLDEEQPSGYRQPNTADRKSNMQQSSISDKTRKEDSSNSTGFHVQKEE
SQDSRKQRGDIAPNMEVEPSPLRTVTNPMEKDQDSSLFVSPVTPTQPKNG
GLGCISDPKVAESKMRDAAEGQNLPHGLKIKESTTSSEAPTSVTTSVQCM
KPETPVSFASGLDGQHGCVSTTEQKSEAQSRSPQTNEGCGQIQEPSSSQM
GKASLRRGDMASAVVPRCEDTTRFATPKPAKAMTDGSANHAREMVLQDDE
VSEVHEYEREPNHNFTAEEELKNTRSEHSMKPPEQATPMQSVAEITAPSE
DKVQSLRRNMERTGSPEMKTDLSTNLTKCQTEGSIEEMQHESLSLGRPAK
HTQRGSVDAQFPQKDIARSSSEATHIDSDKRCKSFATASLGKREIEEECN
VPIITTNHGECKTTQNAKLSLQESRKGKQTFSKRVRFVEPEKSSLPSVGR
KGCSDIMKMRMRKARRRQMTPLVPNGPNVTVMTMRGSGPNEKERRVYLDE
LQYLLDGVFKPSGKAEEKSPQLESQLISKTLISLTQLLMRKSREVSSSEE
DESDSALIQILSTQPALFRSMVSQLCGVFGKSRSIDAMLAVVFVLIFRAT
PKLCLINAVELDILLNAFFRSSAAALKENEEESTKKSLTAKEGKGVDTKK
RRGRLAKRFEESEAESSVLSALNKVVMEASIAEEFSGFKNEAVAGSHLIA
MALSLVMCFHGNLRSLMRENRRLDKVVAVLYSCEKLLVQKTGSNAEEKKL
HFVHNEASTSWVVLGASLKVLEFAILDKVCQVKTARESRLCAIVVDVIRS
VKCLREGMFGSEWILSAALRVAINLCHGFGEASRQFVKQKGHELALMWVT
KECYVAGLLSGEHEHHCTDGIHESFDVRVLCLALLATVVDQERDICGQFH
TLNVTGFKERISGGLQIAIEVLQAAETSLETADEEAQAKDDEEAGRRRPP
DTSERKHLTERAEQVLERRITIGYASLLVGALVHENVKNREMAEKLIPSN
NLIGIAAVLTGFLEFHHEVGIISGSMDRMYARIIDSLVKPFHREDTVVVE
SGESFDVGHNRGKQEDASLPPEAECT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like