Gcaud7444.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7444.t1
Unique NameGcaud7444.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length374
Homology
BLAST of Gcaud7444.t1 vs. uniprot
Match: A0A2V3J1A2_9FLOR (Putative magnesium transporter YhiD n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1A2_9FLOR)

HSP 1 Score: 355 bits (911), Expect = 9.010e-118
Identity = 207/338 (61.24%), Postives = 243/338 (71.89%), Query Frame = 0
Query:   14 FGIPPISIAPQLILNIRQTTTATLAAIALAVSKSHKSVAWRVYQAQAPIQSCITRTTRPRHSCICTAPVVVFDKDYQMPMFSTWNTSSEGEQTQEVPPENKLQQVRFPKPLRPHNVLQRGSSLSSTRNLISELRILARLLVALVVGGVIGMERRAANSLAGVRTFSLVSLGAALFMSTALIAFPNSDPARVAAAISSSVGFLGAGAMHKNAKHSKGLTTASSVWLAAALGVAAASGMFLLSFTGAISTVLIARYARFDSSLQLIRGDPTAVFSKREDEXXXXXXXXXXXXXXXXXXXXXRDGDG----QLFDSRSNGSVRHFDVLEASSSTDFDARSQ 347
            FG+PPISIA +L+ NIR+TTTA  AAIA+  +KS  S  W+V+ +  P  + +  + R R  C+CT PVVVFDKDY++     W +  E  Q++    +N++Q  R  K LRPHNVL+RGSSLSS RNL+SELRIL RLLVALVVGGVIGMERRAANSLAGVRTFSLVSLGAA+FMST L+AFP +DPARVAAAISSSVGFLGAGAMHKNAKHSKGLTTASSVWLAAALG+AAASGMF+LSFTGAISTVLIARYARFDSSLQLIRGDPT V  +  D                         D      ++ +  NG     +V++ S+S D D  SQ
Sbjct:    8 FGVPPISIAAKLLTNIRETTTAAFAAIAVVANKSDTSSLWQVHVSH-PTPAYVAHSHRCRRECLCTTPVVVFDKDYELQPSWMWQSDLERAQSEATERDNQVQAARPTKKLRPHNVLERGSSLSSQRNLVSELRILMRLLVALVVGGVIGMERRAANSLAGVRTFSLVSLGAAVFMSTTLVAFPTADPARVAAAISSSVGFLGAGAMHKNAKHSKGLTTASSVWLAAALGIAAASGMFVLSFTGAISTVLIARYARFDSSLQLIRGDPTVVDEREHDGENSSRSGRRSSDPEDDYIYPSEKEDAIYGDDVYRAGDNGRYNSGEVIKQSASIDCDPSSQ 344          
BLAST of Gcaud7444.t1 vs. uniprot
Match: R7Q846_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q846_CHOCR)

HSP 1 Score: 219 bits (557), Expect = 3.650e-65
Identity = 125/157 (79.62%), Postives = 139/157 (88.54%), Query Frame = 0
Query:  135 SLSSTRNLISELRILARLLVALVVGGVIGMERRAANSLAGVRTFSLVSLGAALFMSTALIAFPNSDPARVAAAISSSVGFLGAGAMHKNAKHSKGLTTASSVWLAAALGVAAASGMFLLSFTGAISTVLIARYARFDSSLQLIRGDPTAVFSKREDE 291
            SL    ++ +E+R+L RL+VALVVGG IGMERRAANSLAGVRTFSLVSLGAA+FM T L+AFP +DPAR+AAAISSSVGFLGAGAMHKNAKH +GLTTASSVWLAAALG+AAASGMFLLSFTGA+ TVLIARYARFDSSLQLIR DP+  FS   DE
Sbjct:   87 SLPPRPSVAAEIRVLTRLVVALVVGGCIGMERRAANSLAGVRTFSLVSLGAAIFMITILVAFPAADPARIAAAISSSVGFLGAGAMHKNAKHHRGLTTASSVWLAAALGIAAASGMFLLSFTGAVITVLIARYARFDSSLQLIRDDPS--FSGLRDE 241          
BLAST of Gcaud7444.t1 vs. uniprot
Match: A0A2D6WJX9_9CHLR (Magnesium transporter MgtC n=1 Tax=Dehalococcoidales bacterium TaxID=2026733 RepID=A0A2D6WJX9_9CHLR)

HSP 1 Score: 99.0 bits (245), Expect = 1.400e-21
Identity = 58/128 (45.31%), Postives = 88/128 (68.75%), Query Frame = 0
Query:  145 ELRILARLLVALVVGGVIGMERRAANSLAGVRTFSLVSLGAALFMSTALIAFPNSDPARVAAAISSSVGFLGAGAMHKNAKHS-KGLTTASSVWLAAALGVAAASGMFLLSFTGAISTVLIARYARFD 271
            EL +  R+L+A V+GG+IG ERR A+   G+RT  L+S GAALF   ++ AF + DPARVAA + + +GFLGAGA+ +  +   +GLTTAS++W+AAA+G+AA  G++L++    +  +L+    R D
Sbjct:    4 ELEMSLRILLAAVLGGIIGYERRRADKPVGLRTLVLISTGAALFTVASVYAFGDGDPARVAAGVVAGIGFLGAGAIIRRQEGGVEGLTTASAIWVAAAIGLAAGVGLYLIATVTTVIVLLVLILLRHD 131          
BLAST of Gcaud7444.t1 vs. uniprot
Match: A0A1G1D380_9BACT (Magnesium transporter MgtC n=1 Tax=Nitrospinae bacterium RIFCSPLOWO2_02_39_17 TaxID=1801684 RepID=A0A1G1D380_9BACT)

HSP 1 Score: 99.0 bits (245), Expect = 1.560e-21
Identity = 60/123 (48.78%), Postives = 85/123 (69.11%), Query Frame = 0
Query:  142 LISELRILARLLVALVVGGVIGMERRAANSLAGVRTFSLVSLGAALFMSTALIAFPNSDPARVAAAISSSVGFLGAGAMHKNAKHSKGLTTASSVWLAAALGVAAASGMFLLSFTGAISTVLI 264
            +I+E  ++ RL++A V GG+IG ER+  +  AG+RT  LVS GAALF   +  AF  +DP+R+AA I + +GFLGAG + +     KGLTTA+S+W  AALG+A A G++LLS   AI+ +LI
Sbjct:    1 MIAESEVILRLILAAVAGGIIGFERKTFHKPAGIRTHMLVSTGAALFTLVSTTAFTETDPSRIAAGIVTGIGFLGAGTIFRAKDTVKGLTTAASLWSVAALGLAIAVGLYLLS---AIAVLLI 120          
BLAST of Gcaud7444.t1 vs. uniprot
Match: A0A847FA99_9CHLR (MgtC/SapB family protein n=1 Tax=Dehalococcoidales bacterium TaxID=2026733 RepID=A0A847FA99_9CHLR)

HSP 1 Score: 98.6 bits (244), Expect = 1.840e-21
Identity = 56/127 (44.09%), Postives = 90/127 (70.87%), Query Frame = 0
Query:  144 SELRILARLLVALVVGGVIGMERRAANSLAGVRTFSLVSLGAALFMSTALIAFPNSDPARVAAAISSSVGFLGAGA-MHKNAKHSKGLTTASSVWLAAALGVAAASGMFLLSFTG---AISTVLIAR 266
            +E+ ++ RLL+A V+GGVIG ER  A   AGVR  +L+SLG+A+F + +L  F   DP+R+AA I S +GF+GAGA +H+++   +G+TTA+S+WLAA +G+A  +G++ ++      A++ +LI R
Sbjct:    3 AEIEVVLRLLLAAVLGGVIGFERWKAGKPAGVRDLALISLGSAIFTAVSLEGFTGGDPSRIAAGIVSGIGFIGAGAILHRDSGGVQGITTANSIWLAAGIGLAVGAGLYYIALAATVIALTVLLIKR 129          
BLAST of Gcaud7444.t1 vs. uniprot
Match: A0A7C4HYI6_9ARCH (MgtC/SapB family protein n=1 Tax=Nitrososphaeria archaeon TaxID=2268198 RepID=A0A7C4HYI6_9ARCH)

HSP 1 Score: 98.6 bits (244), Expect = 2.420e-21
Identity = 56/129 (43.41%), Postives = 86/129 (66.67%), Query Frame = 0
Query:  145 ELRILARLLVALVVGGVIGMERRAANSLAGVRTFSLVSLGAALFMSTALIAFPNSDPARVAAAISSSVGFLGAGAMHKNAKHSKGLTTASSVWLAAALGVAAASGMFLLSFTGAISTVLIARYARFDSS 273
            EL I+ RLL+A+V+G +IG ER   +  AG+RT  LV+LG+ LF   +L  FP SDPAR+AA + + +GF+GAGA+ +  +   GLTTA+S+W++A++G+A   G ++L+    I T +I R    + S
Sbjct:    5 ELEIVFRLLIAVVLGSIIGYEREKVDKPAGLRTHMLVALGSCLFTILSLYGFPGSDPARIAAYVVAGIGFIGAGAILQTRERVIGLTTAASIWVSASIGMAVGVGFYILATITTILTYIILRLRVIEKS 133          
BLAST of Gcaud7444.t1 vs. uniprot
Match: A0A7J2HSP7_9ARCH (MgtC/SapB family protein n=1 Tax=Nitrososphaeria archaeon TaxID=2268198 RepID=A0A7J2HSP7_9ARCH)

HSP 1 Score: 98.6 bits (244), Expect = 2.700e-21
Identity = 55/113 (48.67%), Postives = 81/113 (71.68%), Query Frame = 0
Query:  142 LISELRILARLLVALVVGGVIGMERRAANSLAGVRTFSLVSLGAALFMSTALIAFPNSDPARVAAAISSSVGFLGAGAMHKNAKHSKGLTTASSVWLAAALGVAAASGMFLLS 254
            +I EL +  RLL+A  +G V+G ER   +  AG+RT  LVSLG+ LF   +L+AFP SDPARVAA I + +GF+GAG + +  +   G+TTA+S+W+AA++G+AA +G +LL+
Sbjct:    1 MIQELELTLRLLLAFALGAVLGFERERVDKPAGLRTHILVSLGSCLFTILSLMAFPGSDPARVAAYIVAGIGFIGAGTILQTRERIVGITTAASLWVAASIGMAAGAGFYLLA 113          
BLAST of Gcaud7444.t1 vs. uniprot
Match: A0A1V5PUX5_9CHLR (Putative Mg(2+) transport ATPase n=1 Tax=Chloroflexi bacterium ADurb.Bin360 TaxID=1852861 RepID=A0A1V5PUX5_9CHLR)

HSP 1 Score: 98.2 bits (243), Expect = 4.530e-21
Identity = 57/119 (47.90%), Postives = 83/119 (69.75%), Query Frame = 0
Query:  143 ISELRILARLLVALVVGGVIGMERRAANSLAGVRTFSLVSLGAALFMSTALIAFPNSDPARVAAAISSSVGFLGAGAMHKNAKHS--KGLTTASSVWLAAALGVAAASGMFLLSFTGAI 259
            ISEL ++ RL++A ++G +IG+ER  A   AGVRT +L +LGAA F   ++ AFP SDPARVAA + + +GFLGAG + K+  H   +GLTTA+ +W   A+G+A  SG++LL  + A+
Sbjct:    4 ISELELIGRLVLATLLGFLIGLERELAGRPAGVRTHALAALGAATFALISVEAFPGSDPARVAAGVVTGLGFLGAGMIMKDGGHQGVQGLTTAAGIWAVGAVGLAVGSGLYLLGVSSAV 122          
BLAST of Gcaud7444.t1 vs. uniprot
Match: A0A2D5XCI1_9ARCH (Magnesium transporter MgtC n=1 Tax=Candidatus Woesearchaeota archaeon TaxID=2026803 RepID=A0A2D5XCI1_9ARCH)

HSP 1 Score: 97.4 bits (241), Expect = 5.500e-21
Identity = 55/130 (42.31%), Postives = 88/130 (67.69%), Query Frame = 0
Query:  142 LISELRILARLLVALVVGGVIGMERRAANSLAGVRTFSLVSLGAALFMSTALIAFPNSDPARVAAAISSSVGFLGAGAMHKNAKHSKGLTTASSVWLAAALGVAAASGMFLLSFTGAISTVLIARYARFD 271
            +I ++ I  RLLVA ++GG+IG+ER++ +  AG+RT  L+++GAALF      +F  SDP+R+ A + + +GFLGAGA+ ++  H KGLTTA+S+W  AA+G++   G +LL    A+  +LI +  R +
Sbjct:    1 MIVDVEIFLRLLVASLLGGIIGLERKSFHKAAGIRTHMLIAMGAALFTILGTTSF--SDPSRIVAGLVTGIGFLGAGAIFRSESHVKGLTTAASMWAVAAIGLSIGIGEYLLGAAAAVIVILILQLYRIN 128          
BLAST of Gcaud7444.t1 vs. uniprot
Match: A0A7V2QHT3_9CHLR (MgtC/SapB family protein n=1 Tax=Thermoflexia bacterium TaxID=2420334 RepID=A0A7V2QHT3_9CHLR)

HSP 1 Score: 97.8 bits (242), Expect = 5.960e-21
Identity = 60/136 (44.12%), Postives = 86/136 (63.24%), Query Frame = 0
Query:  143 ISELRILARLLVALVVGGVIGMERRAANSLAGVRTFSLVSLGAALFMSTALIAFPNSDPARVAAAISSSVGFLGAGAMHKN-AKHSKGLTTASSVWLAAALGVAAASGMFLLSFTGAISTVLIA---RYARFDSSL 274
            ISEL ++ RLL+A+ +G +IG+ER  A   AG RT +L SLGAA+F   +L+ FP  DPARVAA + + +GFLGAG + K   +   GLTTA+ +W    +G+A  +G++LL   GA+   L+    R+ R D  L
Sbjct:    4 ISELELVGRLLLAVFLGFLIGLERELAGQPAGERTHALASLGAAIFALVSLMGFPEPDPARVAAGVVTGLGFLGAGMILKEKGREVHGLTTAAGIWAVGGIGLAVGAGLYLLGIAGAVLVGLVLGLERWLRIDERL 139          
The following BLAST results are available for this feature:
BLAST of Gcaud7444.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1A2_9FLOR9.010e-11861.24Putative magnesium transporter YhiD n=1 Tax=Gracil... [more]
R7Q846_CHOCR3.650e-6579.62Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2D6WJX9_9CHLR1.400e-2145.31Magnesium transporter MgtC n=1 Tax=Dehalococcoidal... [more]
A0A1G1D380_9BACT1.560e-2148.78Magnesium transporter MgtC n=1 Tax=Nitrospinae bac... [more]
A0A847FA99_9CHLR1.840e-2144.09MgtC/SapB family protein n=1 Tax=Dehalococcoidales... [more]
A0A7C4HYI6_9ARCH2.420e-2143.41MgtC/SapB family protein n=1 Tax=Nitrososphaeria a... [more]
A0A7J2HSP7_9ARCH2.700e-2148.67MgtC/SapB family protein n=1 Tax=Nitrososphaeria a... [more]
A0A1V5PUX5_9CHLR4.530e-2147.90Putative Mg(2+) transport ATPase n=1 Tax=Chlorofle... [more]
A0A2D5XCI1_9ARCH5.500e-2142.31Magnesium transporter MgtC n=1 Tax=Candidatus Woes... [more]
A0A7V2QHT3_9CHLR5.960e-2144.12MgtC/SapB family protein n=1 Tax=Thermoflexia bact... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 287..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 320..345
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..373
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 289..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 346..373
NoneNo IPR availablePANTHERPTHR33778:SF3PROTEIN MGTCcoord: 138..337
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 236..265
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..165
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 225..235
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 166..176
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 266..373
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 177..196
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 202..224
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..147
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 197..201
NoneNo IPR availableTMHMMTMhelixcoord: 175..197
NoneNo IPR availableTMHMMTMhelixcoord: 148..165
NoneNo IPR availableTMHMMTMhelixcoord: 204..221
NoneNo IPR availableTMHMMTMhelixcoord: 236..258
IPR003416MgtC/SapB/SrpB/YhiD familyPRINTSPR01837MGTCSAPBPROTcoord: 227..251
score: 45.47
coord: 174..192
score: 42.98
coord: 155..174
score: 42.33
coord: 200..222
score: 50.29
IPR003416MgtC/SapB/SrpB/YhiD familyPFAMPF02308MgtCcoord: 152..266
e-value: 8.5E-28
score: 97.2
IPR003416MgtC/SapB/SrpB/YhiD familyPANTHERPTHR33778PROTEIN MGTCcoord: 138..337

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_10_length_87931_cov_4.732901contigNODE_10_length_87931_cov_4.732901:86717..87838 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7444.t1Gcaud7444.t1Gracilaria caudata M_176_S67 malemRNANODE_10_length_87931_cov_4.732901 86717..87838 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7444.t1 ID=Gcaud7444.t1|Name=Gcaud7444.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=374bp
MVSMRVTNGATYGFGIPPISIAPQLILNIRQTTTATLAAIALAVSKSHKS
VAWRVYQAQAPIQSCITRTTRPRHSCICTAPVVVFDKDYQMPMFSTWNTS
SEGEQTQEVPPENKLQQVRFPKPLRPHNVLQRGSSLSSTRNLISELRILA
RLLVALVVGGVIGMERRAANSLAGVRTFSLVSLGAALFMSTALIAFPNSD
PARVAAAISSSVGFLGAGAMHKNAKHSKGLTTASSVWLAAALGVAAASGM
FLLSFTGAISTVLIARYARFDSSLQLIRGDPTAVFSKREDEEDEEDEEDE
EDEEEEEEEEEERDGDGQLFDSRSNGSVRHFDVLEASSSTDFDARSQRGR
QADSDRDSGGGGDGGDAKDAKED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003416MgtC/SapB/SrpB/YhiD_fam