Gcaud1658.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1658.t1
Unique NameGcaud1658.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length362
Homology
BLAST of Gcaud1658.t1 vs. uniprot
Match: A0A2V3IUV9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUV9_9FLOR)

HSP 1 Score: 475 bits (1223), Expect = 1.180e-165
Identity = 237/339 (69.91%), Postives = 282/339 (83.19%), Query Frame = 0
Query:    1 MLASRLRSRHECHPSTEVQTLAARPPPTSPPREIDAATIATLDALPTELVLERARLVSQAPSRMPYIAIYGKYNKRWYVDIVTLPHNAIRCLVSSVFELLSASHRLALDMTESDFEQLFTFLQEFDHFVRVVFDAEQKILFPEVEHMLKKRPDYTTHALHPNLRATTISTIHALLNKLTEETLNETPSLTVIHILQTTMDKLSTQLLDYFAIKESILPRVLFRSYRGAKEKNRMEARLIRFFEEANHQYYYTALLTLPLNNEQVRIDFEERHFPKPNHRQQYRDAVDIVQTTLMAIPAQFQQAARQYEQRFSMKIFVENYGTDRDHHVTTQLVENVSQS 339
            +LASRLRSRHE   S ++  LA+ P P+  PREI AATIAT++ LPTE+VLERARLVS+AP+RMPYI IYGKYNKRWYVDIVTLP NAIRCLVS+ FEL+ A+HRLALDMT  DF+QLF FL EFDHF+RV+FD+E+K+L+PE+EH LKKR DY+T ALHP+ RA T + +HALLN+LT+E L  TPS+T I +LQ TMD LSTQLLDYF +KE  LPRV FRS+RG KEKNRME RLIR+FE+AN++YYY+ALLTLPLNNEQVR+DFEERHF + N R+ YR AV+ VQ TL+AIP +F+QAAR YEQRFS+K FVE YGTDRD H TTQLV+    S
Sbjct:    2 VLASRLRSRHERKRSQQIHALASLPQPSDAPREIQAATIATIEELPTEVVLERARLVSEAPARMPYIGIYGKYNKRWYVDIVTLPDNAIRCLVSAAFELIGAAHRLALDMTVPDFDQLFAFLSEFDHFIRVIFDSEEKVLYPEMEHALKKRADYSTFALHPSSRAATRAHVHALLNQLTDEELRHTPSVTAIRLLQQTMDSLSTQLLDYFNVKECTLPRVFFRSFRGCKEKNRMETRLIRYFEDANNEYYYSALLTLPLNNEQVRLDFEERHFARQNKRESYRHAVNAVQGTLLAIPRRFEQAARSYEQRFSVKTFVEKYGTDRDQHATTQLVDEKGAS 340          
BLAST of Gcaud1658.t1 vs. uniprot
Match: R7QKI7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKI7_CHOCR)

HSP 1 Score: 328 bits (842), Expect = 3.770e-108
Identity = 172/321 (53.58%), Postives = 229/321 (71.34%), Query Frame = 0
Query:   13 HPSTEVQTLAARPPPTSPPREIDAATIATLDALPTELVLERARLVSQAPSRMPYIAIYGKYNKRWYVDIVTLPHNAIRCLVSSVFELLSASHRLALDMTESDFEQLFTFLQEFDHFVRVVFDAEQKILFPEVEHMLKKRPDYTTHALHPNLRATTISTIHALLNKLTEETLNETPSLTVIHILQTTMDKLSTQLLDYFAIKESILPRVLFRSYRGAKEKNRMEARLIRFFEEANHQYYYTALLTLPLNNEQVRIDFEERHFPKPNHRQQYRDAVDIVQTTLMAIPAQFQQAARQYEQRFSMKIFVENYGTDRDHHVTTQLV 333
            HPS    T    P PT+PP  I+AA ++ +D L  E +LER+RLVS AP+RMPYI  +GKYNKRWYVDIV+LPHN++R L+S VF LL++ HRLALDMT +DF+ LF FL EF  +   +  AE ++++PEVE  L+KRPDY  H LHP  RA   + I  LL  LT+ TL+   ++ V + LQ T+D+LS QLLDYF+ +E++LPR+   S RG++EKN+MEA+LI++F +A H++YYTALL LPL++++VR DFEERHF KP    Q+R AV  VQ +L+AIP  F  AA  YE +FSM  F+ENYG DRD   TT ++
Sbjct:   16 HPSPISDT--PPPTPTAPPT-IEAARVSQMD-LDRECILERSRLVSIAPARMPYIGFHGKYNKRWYVDIVSLPHNSVRTLISEVFGLLTSVHRLALDMTRADFDNLFLFLAEFQAYTAALLAAEDRLVYPEVEAALRKRPDYAAHVLHPTHRAERKNDIARLLAALTDPTLHYLQAVAVANTLQATVDELSRQLLDYFSAQEAVLPRIFAHSMRGSREKNKMEAKLIKYFADAGHEFYYTALLALPLHSQEVRADFEERHFAKPARAHQFRTAVKRVQDSLIAIPRAFDAAASDYETKFSMAAFLENYGKDRDVDATTTMI 332          
BLAST of Gcaud1658.t1 vs. uniprot
Match: R7QIK0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIK0_CHOCR)

HSP 1 Score: 131 bits (330), Expect = 2.470e-31
Identity = 87/273 (31.87%), Postives = 144/273 (52.75%), Query Frame = 0
Query:   64 MPYIAIYG-KYNKRWYVDIVTLPHNAIRCLVSSVFELLSASHRLALDMTESDFEQLFTFLQEFDHFVRVVFDAEQKILFPEVEHMLKKRPDYTTHALH-PNLRA--------TTISTIHALLNKLTEETLNETPSLTVIHILQTTMDKLSTQLLDYFAIKESILPRVLFRSYR-GAKEKNRMEARLIRFFEEANHQYYYTALLTLPLNNEQVRIDFEERHFPKPNHRQQYRDAVDIVQTTLMAIPAQFQQAARQYEQRFSMKIFVENYGTDRD 325
            MP +A +G ++  +WYVD+V LPHNAIRC + + F + +A  +LALD+ E+D  +++ +L   D FV  +  AE + ++P V+  L+K        LH P L +        T I  + A   K  +     T +   I+ L+  +D+L   LLDYFA  E  +P++L ++ R G KEK+++E ++  +     H     ALL   + +   R +F  R+  K N R  ++  V  V+ + M +   F   A +YE+RF+M  FV++Y  + D
Sbjct:    1 MPAVAYFGARFGDKWYVDLVALPHNAIRCQLRAAFIIANALGKLALDVGEADLARVYAWLGTLDRFVAALLTAEDRFVYPLVDANLRKAKTPEGAQLHLPELLSLRGRDVAKTRIRELLADARKTRDVATGATRA--KINALRFALDQLGANLLDYFAAMEKFVPKLLKKALRNGPKEKDKVEKKMFEYLYAQPHGAMLGALLLQCIESRSRRAEFVNRNIRKKNDRASFKLHVKKVEASHMRLALAFDDVANKYERRFNMSTFVKHYDANTD 271          
BLAST of Gcaud1658.t1 vs. uniprot
Match: A0A2V3IVC6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVC6_9FLOR)

HSP 1 Score: 120 bits (302), Expect = 1.810e-27
Identity = 91/296 (30.74%), Postives = 151/296 (51.01%), Query Frame = 0
Query:   51 LERARLVSQAPSRMPYIAIYG-KYNKRWYVDIVTLPHNAIRCLVSSVFELLSASHRLALDMTESDFEQLFTFLQEFDHFVRVVFDAEQKILFPEVEHMLKKRPDYTTHALH-PNL-----RATTISTIHALLN---KLTEETLNETPSLTVIHILQTTMDKLSTQLLDYFAIKESILPRVLFRSYR-GAKEKNRMEARLIRFFEEANHQYYYTALLTLPLNNEQVRIDFEERHFPKPNHRQQYRDAVDI--VQTTLMAIPAQFQQAARQYEQRFSMKIFVENYGTDRDHHVTTQLV 333
            +ERA++V  +  RMP +  +G +Y  +WYVD+V LPHNAIR  +   F + +A   L LD+ + D  +++ +L   + FVR VF+AE + + P ++  + K        L+ P L     R T    I  LL    K  +    E  S+  I+ L+  +D+    +LDYFA  E I P++  R+ R G +++ ++E ++  F           AL    + +   R  F ER+  K   RQ+    VD+  VQ T M + A F+ AA +YE+RF++  F+++Y    D  +T  ++
Sbjct:   39 MERAKVVMTSSPRMPAVGYFGGRYGHKWYVDLVALPHNAIRRQLCDAFIMANALGTLQLDVADGDLARVYAWLGTLESFVRAVFNAEARFILPLLDANVVKASSSDGKQLYLPELISVRGRVTAQQRIFDLLKTARKTRDVATGE--SVAKINALRYALDQFGANVLDYFAAIEKIAPKLFKRTLRNGQRQQIKLEHKMFEFVHRHEQGAMLAALFMQCIESRTTRQAFLERNLKK---RQRGDFIVDVKRVQNTHMRLAAAFEDAAAKYEKRFNVNKFLQHYDAQGDSKMTLAML 329          
The following BLAST results are available for this feature:
BLAST of Gcaud1658.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IUV9_9FLOR1.180e-16569.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QKI7_CHOCR3.770e-10853.58Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QIK0_CHOCR2.470e-3131.87Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IVC6_9FLOR1.810e-2730.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..355
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..361

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_34_length_72082_cov_4.421108contigNODE_34_length_72082_cov_4.421108:55874..56959 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1658.t1Gcaud1658.t1Gracilaria caudata M_176_S67 malemRNANODE_34_length_72082_cov_4.421108 55874..56959 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1658.t1 ID=Gcaud1658.t1|Name=Gcaud1658.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=362bp
MLASRLRSRHECHPSTEVQTLAARPPPTSPPREIDAATIATLDALPTELV
LERARLVSQAPSRMPYIAIYGKYNKRWYVDIVTLPHNAIRCLVSSVFELL
SASHRLALDMTESDFEQLFTFLQEFDHFVRVVFDAEQKILFPEVEHMLKK
RPDYTTHALHPNLRATTISTIHALLNKLTEETLNETPSLTVIHILQTTMD
KLSTQLLDYFAIKESILPRVLFRSYRGAKEKNRMEARLIRFFEEANHQYY
YTALLTLPLNNEQVRIDFEERHFPKPNHRQQYRDAVDIVQTTLMAIPAQF
QQAARQYEQRFSMKIFVENYGTDRDHHVTTQLVENVSQSSTPTHPSHTPT
VSDKLQSTDKM*
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