Gcaud1656.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1656.t1
Unique NameGcaud1656.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length968
Homology
BLAST of Gcaud1656.t1 vs. uniprot
Match: A0A2V3IUW0_9FLOR (F-box protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUW0_9FLOR)

HSP 1 Score: 1076 bits (2783), Expect = 0.000e+0
Identity = 571/978 (58.38%), Postives = 708/978 (72.39%), Query Frame = 0
Query:    2 LPARDHATLSATHSYLRKFLASVVPGMKLRLYPHQMSALERMSQMEEDSITDDMPLIYDFKVHDLRHAVIVADLADGSIYELASFPRVTRPKGGLLCDEPGLGKTITTLSHILKTLGREPKPPANRET-HVVEMEGIKVTSYTEQITTRYESLDTRRKSTSRMGRLMPALGNH--KPKRRIQRPNFFQSGKGQGILPMCSGT--EQIYLSRATLVVVPSVLTEHWMHQIDLHVEMEGLSVLRVHSHRDLPDTALELAANYDIIIVPFDFIANLRHEIRQGMPLLLKVHFYRVIVDEGHRISSSHMSNFAVGCDKIKTDIRWVMTGTPTPYTPRTDVDHLYSLLTFIRDEAYGLDKDAWRVGIRDPYMRYKTESLDRLARHLESVMIRADKSILKAKCHVRNIFLNFSADTAESYNGLIRMGRRNLITSDWFHEDHEQSLLNKRNKGLASAFVSNLRKACCFGGSQDVRIYTNDVVEVLLLLRDKHKHSSHAAEDECF---RYPVLEENVDIETGQQNGYDQYYLEDLLRRRDWYAKI--RSENRSMMQIERQNPKRGPNEPRYIS-YVVSGKLLKIAKALLRKIGTCSQCQKALDIPFVTPCAHLLCDGCVVGNRTACAVQGCHYKYNMGRNQEPKDLIELQPCFFASDWMPNWD-TSESAKMRYLVNKIEQLPQVEVWEEGCSEARMVRPKVIIHSEHTDHLKLAQLYLKESEALKDSYIDIVRNQRDVSDFVKKCRSPAEYSRKAIRAFAENEDASILLMNSRLGAVGLDLSFVRYIFLLEPLWDSAQEMQIISRAHRIGCVGDIVVERLIMRGSIEEAMLMELQSSVNAVEEGSAAGMASAKAEKDHQRRRSIFLNMRPVKSMEQLARDGQEAGLVAKMTEMNAYEEKVALTQGIAEDGDGGEEG---HTVEERWCDA-------DGVDMRRQLMEARKRTAEHRFAGS----SLTQTA--GDEEERLGGQSDGG 951
            L ARDH  LSA H +    L+S+VPGMKLRLYPHQ+SAL  M +ME   +T  MPLI+ F V +    ++VADL DGSIY+L  FPRV RP+GGLLCDEPGLGKTITTLSHILKTLG++P  P   +    VE+ G  V SY E I++RY S DTR+K   R  RL+PAL     + +R+I RP+FFQ+GKG+G+LP+C G   EQI+LS+ATL++VP VLTEHW  QI+LHVE   L VL+VHS  +LP++A ELAANYD+II+ FD IA L  EIR  MPLLLKVHF+RVIVDEGHRISSS  SNFAVGC+K+KTDIRWVMTGTPTPYTPRTD+DH YSL++FIRDEAYG+DKDAWRVGIR+PYM+YK ESLDRL + LE++MIRADKSILK+KCHVRN++L+FS  TA SYNGL+ MGRRNLITSDWF E+H QSLLNKRN+G A  FVSNLRKACCFGGS DV +Y  D+ + L  L  K++  +    D+ F   R P + E++ +E           L D  R  D + K+  R    + +++  +  K G  + +    Y+ +GKL ++ KAL  + G C  C K   +PF+TPCAHLLCD C+V +RT C V GC YKY MG   EPKDLIELQP  ++ +W  +WD T  S+KM YLV +I  LP VEVW++G   AR VRPKVI+HSE TDHLKLAQLYLK+SEALKD+Y+D+V NQ++ S + ++C S  +Y+R++I+ FAE+E AS+LLMNSRLGAVGLDLSFVRYIFLLEPLWD+AQEMQIISRAHRIGCV DIVVERLIMRGSIEE ML ELQ SVN VEE SAAG+A AKAEKD Q+RR+I L+MR V+SM+ L  DG+E G+VAK+TE+ A+ E+ A  +G  EDG+  E+G   H  E+ W            VD+R  +M  R+R A  +          T+ A  G  EE+ GG+ + G
Sbjct:  181 LSARDHCNLSAAHPFFGHLLSSIVPGMKLRLYPHQVSALRLMQRMERRGVTTPMPLIHRFSVKEQVSFIVVADLVDGSIYQLERFPRVKRPRGGLLCDEPGLGKTITTLSHILKTLGQQPCVPRGHQAGDDVEVNGKYVQSYKEYISSRYGSFDTRQKPVPRASRLVPALHTQSSRSQRQIHRPDFFQAGKGRGVLPLCRGPGMEQIFLSQATLIIVPPVLTEHWKQQIELHVESGVLRVLQVHSRYNLPESAQELAANYDVIIISFDVIAGLHTEIRCRMPLLLKVHFFRVIVDEGHRISSSQASNFAVGCEKLKTDIRWVMTGTPTPYTPRTDIDHFYSLISFIRDEAYGMDKDAWRVGIREPYMKYKPESLDRLCKLLEAIMIRADKSILKSKCHVRNVYLHFSEATAASYNGLVTMGRRNLITSDWFDEEHLQSLLNKRNRGPAHTFVSNLRKACCFGGSVDVNVYERDLADALRWLHTKYERYTGVTADDYFEDPRSPKIVEDMSLEE----------LLDFQRCHDLFRKVTERGAPSTRLKLWPEADKWGKEKGKEGKCYLFTGKLHRLGKALRDRSGDCDACAKNTTLPFITPCAHLLCDRCLVRSRTRCVVAGCLYKYEMGSQMEPKDLIELQPSIYSQEWRWDWDRTDSSSKMLYLVERISSLPLVEVWDKGSMVARKVRPKVIVHSEQTDHLKLAQLYLKQSEALKDAYVDMVWNQQERSKYARRCTSATDYARQSIKYFAEDERASVLLMNSRLGAVGLDLSFVRYIFLLEPLWDAAQEMQIISRAHRIGCVSDIVVERLIMRGSIEEGMLRELQGSVNEVEEASAAGLAEAKAEKDDQKRRNIVLDMRVVRSMQDLQEDGEEGGMVAKVTELMAFVEETAEEEGRVEDGE--EDGGGWHGGEDEWAGGAEXXXXXGDVDVRAHVMATRRRKAAKQVGKDRERRERTKRAREGGREEKDGGEGENG 1146          
BLAST of Gcaud1656.t1 vs. uniprot
Match: R7Q8B7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8B7_CHOCR)

HSP 1 Score: 693 bits (1789), Expect = 1.060e-230
Identity = 379/866 (43.76%), Postives = 536/866 (61.89%), Query Frame = 0
Query:    2 LPARDHATLSATHSYLRKFLASVVPGMKLRLYPHQMSALERMSQMEEDSITD-DMPLIYDFKVHDLRHAVIVADLADGSIYELASFPRVTRPKGGLLCDEPGLGKTITTLSHILKTLGREPKPPANRETHVVEM---EGIKVTSYTEQITTRYESL--DTRRKSTSRMGRLMPALGNHKPK---RRIQRPNFFQSGKGQGILPMCSGTEQ--IYLSRATLVVVPSVLTEHWMHQIDLHVEMEGLSVLRVHSHRDLPDTALELAANYDIIIVPFDFIANLRHEIRQGMPLLLKVHFYRVIVDEGHRISSSHMSNFAVGCDKIKTDIRWVMTGTPTPYTPRTDVDHLYSLLTFIRDEAYGLDKDAWRVGIRDPYMRYKTESLDRLARHLESVMIRADKSILKAKCHVRNIFLNFSADTAESYNGLIRMGRRNLITSDWFHEDHEQSLLNKRNKGLASAFVSNLRKACCFGGSQDVRIYTNDVVEVLLLLRDKHKHSSHAAEDECFRYPVLEENVDIETGQQNGYDQYYLEDLLRRRDWYAKIRSENRSMMQIER--QNPKRGPNEPRYISYVVSGKLLKIAKALLRKIGTCSQCQKALDIPFVTPCAHLLCDGCVVGNRTACAVQGCHYKYNMGRNQE-PKDLIELQPCFFA-SDWMPNWDTSESAKMRYLVNKIEQLPQVEVWEEGCSEARMVRPKVIIHSEHTDHLKLAQLYLKESEALKDSYIDIVRNQRDVSDFVKKCRSPAEYSRKAIRAFAENEDASILLMNSRLGAVGLDLSFVRYIFLLEPLWDSAQEMQIISRAHRIGCVGDIVVERLIMRGSIEEAMLMELQSSVNAVEEGSAAGMASAKAEKDHQRRRSIFLNMRPV 852
            L  +D   LS  +  L  F+   VPG+ LRL+PHQ+ +L RM  MEE       M +++ F V  L +  +VAD+ DG++  LA  P++  P+GGL CDEPGLGKTIT LS +LKTLG+ P+PP  R    V     EG  V+ Y E    RY +   ++   + SR GRL P     K +   RR++RP+F     GQG +P  S  E   +YLSR +L+VVP VLT HW  QI +HV   GL VL V   RDLP++A ELA +YD+++  F+ IA L + IR   PLL++V F R+IVDEGH++S   +S FA  C++++ + RWVMTGTPTP T R DVDHLY LL FIRDE YGLDK AW VGIR+P+ +Y  ++L RL   L  VMIRADKS+L ++CH+ N  L+F+  TA  YN L+ + RRNL+T+DWF E H++SLLNK N G A   + NLR ACC+GG++D     ++V++ L  L +K+   +H   ++ F  P  +  +    G     +      L +R D + ++   +   +++ R  +NPK G    R+ + + SG L  I ++ L +   C++C     IP VTPC HLLC+ CV  ++  C    C   Y++   +  P+DLIELQP  ++  D+   WDT+   KM +LV+++  LP+ E W  G SE R +RPKVIIHS  TDHLK   + LKE E LK SYI++ +N R++   +K  +S +E++R+++R FAE+E+ +ILL++S+ G+VGLDLSFV+YIFLLEP+WD++ E+QIISRAHRIG   DI VERL+M+GS+E  +L +L S               A++ +D  R RSI  N++PV
Sbjct:  242 LRPKDCIALSNVNEELHDFMKPFVPGLLLRLFPHQVDSLARMISMEERRPASVSMSMLHRFDVPRLPNVCVVADMTDGTLMRLAQMPQLEAPRGGLFCDEPGLGKTITALSLVLKTLGQMPRPPDGRVMETVPRRYGEG-DVSIYREVAVGRYCAYGEESAVPNQSRRGRLFPFSDVDKRRSSNRRVRRPDFHNPAVGQGSVPFISDRESEVVYLSRGSLIVVPPVLTWHWEEQISMHVREGGLRVLHVKRVRDLPESAEELATDYDVVMTSFNVIAELSNSIRATAPLLMRVRFLRIIVDEGHKLSGGSLSLFAHACERLRAERRWVMTGTPTPSTARCDVDHLYHLLRFIRDEEYGLDKKAWLVGIREPFSQYYPQALKRLQPVLRRVMIRADKSMLTSRCHISNSILDFTKGTAADYNWLVSLTRRNLLTADWFSETHKESLLNKNNLGEAQLAIRNLRMACCYGGTKDAMFDASEVIDTLNELYEKYMEKAHIHPNDRFDCPSTDWPLLTRDGVSGEKEMELQRSLYKRADMWDELAGFSHDFLRLTRHYKNPKDGV---RFRTRIYSGILNDIGRSFLEREAHCARCHVFTSIPMVTPCGHLLCEECVALDKEKCTALHCGVAYDLDNKENVPEDLIELQPAAYSPDDFKAKWDTNWGPKMAHLVDRLRNLPREETWFPGESEPRQMRPKVIIHSTITDHLKFVAVTLKECEDLKYSYIEMFKNTREMDPNLKMIKSASEFARQSVRMFAEDEERNILLLSSKHGSVGLDLSFVQYIFLLEPVWDASMELQIISRAHRIGSKRDIYVERLVMKGSVEHELLQDLDSETQI----GLEKFGGARSHEDLSRVRSILRNLKPV 1099          
BLAST of Gcaud1656.t1 vs. uniprot
Match: A0A2V3ID03_9FLOR (F-box protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID03_9FLOR)

HSP 1 Score: 487 bits (1253), Expect = 2.830e-162
Identity = 238/306 (77.78%), Postives = 264/306 (86.27%), Query Frame = 0
Query:  175 PKRRIQRPNFFQSGKGQGILPMCSGTEQIYLSRATLVVVPSVLTEHWMHQIDLHVEMEGLSVLRVHSHRDLPDTALELAANYDIIIVPFDFIANLRHEIRQGMPLLLKVHFYRVIVDEGHRISSSHMSNFAVGCDKIKTDIRWVMTGTPTPYTPRTDVDHLYSLLTFIRDEAYGLDKDAWRVGIRDPYMRYKTESLDRLARHLESVMIRADKSILKAKCHVRNIFLNFSADTAESYNGLIRMGRRNLITSDWFHEDHEQSLLNKRNKGLASAFVSNLRKACCFGGSQDVRIYTNDVVEVLLLLRDK 480
            P+     P  F+  K +       G ++I+LSRATLV+VP +LTEHW  QID+HVEMEGL VLR+ SH DLPDT L+LA  YDIII+PFD IA L +EI QGMPLLLKVHFYRVIVDEGHRISSSH+SNF +GCDK+KTDIR VMTGTPTPYTPRTDVDHLYSLLTF+RDEAYGLDKDAWRVGIRDPYMRY+TESLDRL+R LES+MIRADKSIL+AKCHVRNIFLNFSADTAESYNGLIRMG+ NLITSDWF E HEQSLLNKRNKG AS FVSNLRKACCFGGS +V+ Y NDVV++LLLLRDK
Sbjct:    4 PRGEFNVPITFRQVKDRVFFRSVVGPKRIFLSRATLVIVPVLLTEHWRDQIDMHVEMEGLKVLRLFSHDDLPDTPLQLATEYDIIIIPFDIIAGLHNEILQGMPLLLKVHFYRVIVDEGHRISSSHVSNFGIGCDKLKTDIRRVMTGTPTPYTPRTDVDHLYSLLTFVRDEAYGLDKDAWRVGIRDPYMRYRTESLDRLSRLLESIMIRADKSILRAKCHVRNIFLNFSADTAESYNGLIRMGKINLITSDWFDEGHEQSLLNKRNKGPASTFVSNLRKACCFGGSMEVKFYRNDVVDMLLLLRDK 309          
BLAST of Gcaud1656.t1 vs. uniprot
Match: A0A2V3ID19_9FLOR (F-box protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID19_9FLOR)

HSP 1 Score: 329 bits (844), Expect = 2.590e-103
Identity = 165/198 (83.33%), Postives = 181/198 (91.41%), Query Frame = 0
Query:  652 MRYLVNKIEQLPQVEVWEEGCSEARMVRPKVIIHSEHTDHLKLAQLYLKESEALKDSYIDIVRNQRDVSDFVKKCRSPAEYSRKAIRAFAENEDASILLMNSRLGAVGLDLSFVRYIFLLEPLWDSAQEMQIISRAHRIGCVGDIVVERLIMRGSIEEAMLMELQSSVNAVEEGSAAGMASAKAEKDHQRRRSIFLNM 849
            MRYLVNKIEQLP VEVWEEGC E RMVRPKVI+HSE+TDHLKLAQLYLK+SE  K++YIDIV NQRD S+FV++C+   EYSRKAI+ FAENEDASILLMNS+LG VGLDLSFVRYIFLLEPLWDSAQEMQIISRAHRIGC+GDIVVERLIMRGSIEEAMLMELQSSVN VEE +AAG+A AKAEKDHQ+RR+I L M
Sbjct:    1 MRYLVNKIEQLPLVEVWEEGCKEVRMVRPKVIVHSENTDHLKLAQLYLKKSEMSKEAYIDIVWNQRDTSEFVRRCKKATEYSRKAIKVFAENEDASILLMNSKLGGVGLDLSFVRYIFLLEPLWDSAQEMQIISRAHRIGCLGDIVVERLIMRGSIEEAMLMELQSSVNVVEEANAAGLAKAKAEKDHQKRRNILLKM 198          
BLAST of Gcaud1656.t1 vs. uniprot
Match: M2X6V7_GALSU (SNF2 domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X6V7_GALSU)

HSP 1 Score: 350 bits (898), Expect = 1.430e-101
Identity = 270/869 (31.07%), Postives = 415/869 (47.76%), Query Frame = 0
Query:   23 SVVPGMKLRLYPHQMSALERMSQME-EDSITDDMPLIY------DFKVHDLRHAVIVADLADGSIYELASFPRVTRP-KGGLLCDEPGLGKTITTLSHILKTLGREPKPPANRETHVVEMEGIKVTSYTEQITTRY---ESLDTRRKSTSRMGRLMPAL------GNHKP----------KRRIQRP-NFFQSGKGQGILPMCSGTEQIYLSRATLVVVPSVLTEHWMHQIDLHVEMEGLSVLRVHSH-------RDLPDTALELAANY-DIIIVPFDFIANLRHEIRQGMPLLLKVHFYRVIVDEGHRISSSHMSNFA-VGCDKIKTDIRWVMTGTPTPYTPRTDVDHLYSLLTFIRDEAYGLDKDAWRVGIRDPYMRYKTESLDRLARHLESVMIRADKSILK--AKCHVRNIFLNFSADTAESYNGLIRMGRRNLITSDWFHEDHEQSLLNKRNKGLASAFVSNLRKACCFGGSQDVRIYTNDVVEVLLLLRDKHKHSSHAAEDECFRYPVLEENVDIETGQQNGYDQYYLEDLLRRRDWYAKIRSENRSMMQIERQNPKRGPNEPRYISYVVSGKLLKIAKALLRKIGTCSQCQKALDIPFVTPCAHLLCDGCVVGNRTACAVQGCHYKYNMGRNQEPKDLIELQPCFFASDWMPNWDTSESAKMRYLVNKIEQLPQVEVWEEGCSEARMVRPKVIIHSEHTDHLKLAQLYLKESEALKDSYIDIVRNQRDVSDFVKKCR--SPAEYSRK--AIRAFAENEDASILLMNSRLGAVGLDLSFVRYIFLLEPLWDSAQEMQIISRAHRIGCVGDIVVERLIMRGSIEEAMLMELQSSVNAVEEGSAAGMASAKAEKDHQRRRSIFLN 848
            S + G+KL L PHQ  AL+ M + E +++     P +Y      +FK  D  +   VA    G+I        V    +GGL CDEPGLGKTIT L+ ILKT  +    PA  E  + E       S   Q T  Y   E+L+  R   S    L P +       NH            KRRIQRP  ++   K +   P  S    +Y+SRATL+VVPS L  HW  Q+ LH   +   ++ V  H       R      L+L  +Y D+++  F  +       +     LL +H++RVI+DEGHR+ +S   N+  + C  ++TD RW+MTGTPTP T  +D+ HL  L  F+RDEA+G+ K+ W   I+ P+   + E LDRL   L   M R  KS ++     ++    L+FS  TA SYN L+ + +RNL+ +D+   DH QSLL+ +N+  A   + N+RK+CC  G                                  +  VL+E+++   G+                             +Q+E QN     +       ++   +L+I K LL   G C  C + + +P VTPC H+LC  C   +R  C ++ C  KY + +   P+DLIELQP F   +W P W+  +SAK+ YL++ ++QL +  + + G    +  + KVI+ S+  +H+ L                  + N  D   + + CR      Y  K  A+  F  +    +L+++S  GA+G DLSFV +I+++EP+W+ +   Q+ISRAHR+G    I V+ L M+G++EE M+ +   S +  E+ ++    S + E   +++RS  LN
Sbjct:  192 SYISGLKLTLLPHQRRALKFMLKRERKETSFYRNPCLYCFRFPENFKFWDSFYVNSVA----GTISLQPPGSEVFEDFRGGLYCDEPGLGKTITILALILKTFRQYADGPA--EEAIFEKSLCSENSI--QATKCYIPNEALNPGRSVPS--SNLSPLICKPQIFKNHSSDDSSSPSPSKKRRIQRPVRYYDIDKVKTSSPPASEGPLVYISRATLIVVPSTLLLHWEEQLTLHSREKIRILVHVGDHHFRICDGRSFRSFPLQLVLHYCDVVLTTFSQVQREYQRAKSNDASLLSIHWFRVILDEGHRVGASLSLNYTKMICCALRTDRRWIMTGTPTPNTSVSDIAHLAPLYEFLRDEAFGVGKNVWLHCIQRPFEAKEFEGLDRLKFLLRRTMFRTLKSEVEFIPPSYISYKLLDFSPVTALSYNELVSVIQRNLLLADFNDPDHTQSLLHPKNRHAARQAIDNVRKSCCIAGH--------------------------------IKLSVLQEDLNETLGK-----------------------------LQLELQNSLSSADAD-----IIQSHILRIQKVLLEG-GLCELCSEWIRLPIVTPCCHILCTDCASTSRKCCPLENCQRKYQLDKKDVPEDLIELQPGFMQENWYPIWEEVDSAKVDYLLSALKQLNEEPILDNGTWTRK--KRKVIVFSQFLEHIFL------------------ISNILDRHGY-RYCRVLGALSYQAKMNALHRFRHDSSFQVLILDST-GALGHDLSFVSHIYIMEPVWNQSLASQVISRAHRMGAKEPIYVDILAMKGTVEETMVTK---SFDLKEDITSRAETSKEKEAIERKKRSFILN 958          
BLAST of Gcaud1656.t1 vs. uniprot
Match: A0A835N525_9ROSI (Uncharacterized protein n=7 Tax=Saliceae TaxID=238069 RepID=A0A835N525_9ROSI)

HSP 1 Score: 301 bits (771), Expect = 2.830e-82
Identity = 213/656 (32.47%), Postives = 308/656 (46.95%), Query Frame = 0
Query:  202 QIYLSRATLVVVPSVLTEHWMHQIDLHVEMEGLSVLRVHSHRDLPDTALELAANYDIIIVPFDFIANLRHEIRQGMPLLLKVHFYRVIVDEGHRISSS-HMSNFAVGCDKIKTDIRWVMTGTPTPYTPRTDVDHLYSLLTFIRDEAYGLDKDAWRVGIRDPYMRYKTESLDRLARHLESVMIRADKSILKA--KCHVRNIFLNFSADTAESYNGLIRMGRRNLITSDWFHEDHEQSLLNKRNKGLASAFVSNLRKACCFGGSQDVRIYTNDVVEVLLLLRDKHKHSSHAAEDECFRYPVLEENVDIETGQQNGYDQYYLEDLLRRRDWYAKIRSENRSMMQIERQNPKRGPNEPRYISYVVSGKLLKIAKALLRKIGTCSQCQKALDIPFVTPCAHLLCDGCVVGNRTACAVQGCHYKYNMGRNQ-------------EPKDLIELQPCF----FASDWMPNWDTSESAKMRYLVNKIEQLPQVE------------------VWEEGC-SEARMVRPKVIIHSEHTDHLKLAQLYLKESEALKDSYIDIVRNQRDVSDFVKKCRSPAEYSRKAIRAFAENEDASILLMNSRLGAVGLDLSFVRYIFLLEPLWDSAQEMQIISRAHRIGCVGDIVVERLIMRGSIEEAMLMELQSS 818
            ++YLSRATLVVVP+ L +HW  QI+ HV+   L +    +H+    +A  LA +YD++I  F+ ++      R+  PL+ +VHF RV++DEGH + SS  ++N       +    RW++TGTPTP TP + + HL  +L F+++EAYGL++ +W  GI  P+     E   RL   L   +I + K+ LK    C  +  FLNF+ D A SYN L+   RRN++T+DW    H +SLLN +     SA + N+R +CC  G   V     D+ E + +L +K               P+ EE+  I         +YYL+        Y                                               G C +C++   +PF+TPC HLLC  CV  N T C   GC Y Y M   +              PKDLIELQP +       DW P+W ++ S+K+ YLV K++ L +V                   V  + C S  +    KVII S+  +H+ LA   +K +                          P     K++  F  +     LLM+    A+GLDLSFV ++FL+EP+WD + E Q+ISRAHR+G    I VE L MRG+IEE ML  LQ +
Sbjct:  736 RLYLSRATLVVVPTNLVDHWKTQIEKHVKPGQLRLCIWTNHKK--PSAHSLAWDYDVVITTFNRLSA-EWGPRKNSPLM-QVHFLRVMLDEGHTLGSSLSLTNKLQMAMSLMASNRWLLTGTPTPNTPHSQLSHLQPMLKFLQEEAYGLNQKSWEAGILRPFEAEMEEGRTRLLHLLHRCLISSRKTDLKTIPPCIRKVAFLNFTEDHARSYNELVVTVRRNILTADWNDPSHVESLLNPKQWKFRSALIRNIRLSCCVAGHIKVTDAGEDIQETMDILIEKGLD------------PISEEHALI---------KYYLQ--------YG----------------------------------------------GNCLRCKEWCRLPFITPCRHLLCLDCVALNSTKCTFPGCGYSYEMQSPEILTRPENPNPKWPVPKDLIELQPSYKQASIFDDWDPDWQSTSSSKVAYLVQKLKALQEVSRESSWSIDKDAQINVSSVVLRQDCFSVNKGALEKVIIFSQFLEHIHLAFAGIKFAGMYSPM--------------------PQINKMKSLATFQHDATCMALLMDGS-AALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPINVETLAMRGTIEEQMLEFLQDT 1291          
BLAST of Gcaud1656.t1 vs. uniprot
Match: A0A151RNK3_CAJCA (F-box protein At3g54460 family n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RNK3_CAJCA)

HSP 1 Score: 298 bits (764), Expect = 9.250e-82
Identity = 272/959 (28.36%), Postives = 415/959 (43.27%), Query Frame = 0
Query:    6 DHATLSATHSYLRKFLASVVPGMKLRLYPHQMSALERMSQMEEDSITDDMPLIYDFKVHD---LRHAVIVADLADGSIYELASFPRVTRPKGGLLCDEPGLGKTITTLSHILKTLGREPKPPANRETHVVEMEGIKVTSYTE----QITTRYES--LDTRR-------KSTSRMGRLMPALG---------------NHKPK---------------------RRIQRPN----------------FFQSGKG-------------------------QGI--------------------LPMCSGTE--QIYLSRATLVVVPSVLTEHWMHQIDLHVEMEGLSVLRVHSHRDLPDTALELAANYDIIIVPFDFIANLRHEIRQGMPLLLKVHFYRVIVDEGHRISSS-HMSNFAVGCDKIKTDIRWVMTGTPTPYTPRTDVDHLYSLLTFIRDEAYGLDKDAWRVGIRDPYMRYKTESLDRLARHLESVMIRADKSILKA--KCHVRNIFLNFSADTAESYNGLIRMGRRNLITSDWFHEDHEQSLLNKRNKGLASAFVSNLRKACCFGGSQDVRIYTNDVVEVLLLLRDKHKHSSHAAEDECFRYPVLEENVDIETGQQNGYDQYYLEDLLRRRDWYAKIRSENRSMMQIERQNPKRGPNEPRYISYVVSGKLLKIAKALLRKIGTCSQCQKALDIPFVTPCAHLLCDGCVVGNRTACAVQGCHYKYNM----GRNQEP-------KDLIELQPCFFAS------DWMPNWDTSESAKMRYLVNKIEQLPQVE----VWEEGCSEARMVRPKVIIHSEHTDHLKLAQLYLKESEALKDS----YIDIVRNQRDVSDF-VKKCRSPAEYS--RKAIRAFAENEDASILLMNSRLGAVGLDLSFVRYIFLLEPLWDSAQEMQIISRAHRIGCVGDIVVERLIMRGSIEEAMLMELQSS 818
            D   +SAT  +LR   ASV+P  KL L+PHQ +A+E M   E  +     PL       D        +  ++  G        P V   +GG+ CDEPGLGKT+T LS I+KT G    PP   +    +  G +   Y E    QITT + S  L+  +       K +    RL  +L                N K K                     R+++  +                F+QS                            +G+                    + +C   +  ++YLSRATLVVVP+ L +HW  QI+ HV    L V     HR  P     LA +YD++I  F  ++      ++ +  L++VH++R+I+DEGH + SS +++N       +    RW++TGTPTP TP + + HL  LL F+ +EAYGL++ +W  G+  P+     E   RL   L   MI A K+ L++  +C  + ++L+F+ + A SYN L+   RRN++ +DW    H +SLLN +     SA + N+R +CC  G                     H   +HA ED       ++E +D+    Q+G D                                   P    Y S           + +L   G C +C++   +P VTPC HLLC  CV  + T C   GC   Y M     R + P       KDLIELQP +  +      +W P+W ++ S+K+ YLV +++ L   +    +  +  +EA  +   V    +++  +   +  L   + L  S    +I ++  Q  V+        SP   S  +K++  F  +     L+M+    A+GLDLSFV ++FL+EP+WD + E Q+ISRAHR+G    I VE L MRG+IEE ML  LQ++
Sbjct:  248 DLTRVSATCRHLRSLAASVMPCTKLNLFPHQRTAVEWMLHRERGAELLPHPLFVPLSTDDGFSFHVNTVSGEIVTGEA------PTVKDFRGGMFCDEPGLGKTVTALSLIMKTRGSLADPPDGAQLVWCQHNGNQNCGYYEISEQQITTLHGSCLLEENKSPVAASFKESMHSNRLTRSLSCIKKNLLFTYDEEAMNSKEKEFGDGLEYSDTWIQCDACHKWRKLEDNSMANSSSAWFCSMNTDPFYQSCNNCSAPNGHCNAFHKIFQAFGLLKRVEKGVCKWYYPQNLNNLTFDVAALGMALCEPLDFVRLYLSRATLVVVPANLVDHWKTQIEKHVSPGQLRVYVWTDHRK-PSVHC-LAWDYDVVITTFSRLSAEWGPRKRSV--LMQVHWFRIILDEGHTLGSSLNLTNKLQMAISLIASNRWILTGTPTPNTPNSQLPHLQPLLRFLHEEAYGLNQKSWEAGVLRPFEAEMEEGRSRLLCLLHKCMISARKTDLQSIPECIKKVVYLDFNEEHARSYNELVLTVRRNILMADWNDPSHVESLLNPKQWKFRSATLKNVRLSCCVSG---------------------HIKVTHAGED-------IQETMDMLA--QSGLD-----------------------------------PTSGEYSSI----------RFILLYGGHCVRCKEWCRLPLVTPCRHLLCLDCVSIDNTKCTYPGCGKLYEMQSRLARPENPNPKWPVPKDLIELQPSYKQAWLMKNDNWDPDWQSTSSSKVSYLVQRLKALRGTDEGTNLNADNSNEAMHIEKGVRNVQKYS--MSSTKTNLNPEKVLIFSQFLEHIHVIEQQLTVAGIKYTGMYSPMHSSNKKKSLAMFQHDSSCMALVMDGS-AALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGASRPIHVETLAMRGTIEEQMLDFLQNA 1118          
BLAST of Gcaud1656.t1 vs. uniprot
Match: A0A7J7D7V4_TRIWF (Uncharacterized protein n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7D7V4_TRIWF)

HSP 1 Score: 299 bits (766), Expect = 1.460e-81
Identity = 212/655 (32.37%), Postives = 313/655 (47.79%), Query Frame = 0
Query:  202 QIYLSRATLVVVPSVLTEHWMHQIDLHVEMEGLSVLRVHSHRDLPDTALELAANYDIIIVPFDFIANLRHEIRQGMPLLLKVHFYRVIVDEGHRISSS-HMSNFAVGCDKIKTDIRWVMTGTPTPYTPRTDVDHLYSLLTFIRDEAYGLDKDAWRVGIRDPYMRYKTESLDRLARHLESVMIRADKSILKA--KCHVRNIFLNFSADTAESYNGLIRMGRRNLITSDWFHEDHEQSLLNKRNKGLASAFVSNLRKACCFGGSQDVRIYTNDVVEVLLLLRDKHKHSSHAAEDECFRYPVLEENVDIETGQQNGYDQYYLEDLLRRRDWYAKIRSENRSMMQIERQNPKRGPNEPRYISYVVSGKLLKIAKALLRKIGTCSQCQKALDIPFVTPCAHLLCDGCVVGNRTACAVQGCHYKYNMGRNQE-------------PKDLIELQPCFFASDWMPNWDTSESAKMRYLVNKIEQLPQVE------VWEEGC--------SEARMVRPKVIIHSEH----TDHLK-LAQLYLKESEALKDSYIDIVRNQRDVSD--FVKKCRSPAEYSR-KAIRAFAENEDASILLMNSRLGAVGLDLSFVRYIFLLEPLWDSAQEMQIISRAHRIGCVGDIVVERLIMRGSIEEAMLMELQSS 818
            ++YLSRATL+VVPS L +HW  QI  HV  + L +     H+    +A  LA NYDI+I  F  ++      +Q    L++VH++RV++DEGH + SS +++N       +    RW++TGTPTP  P + + HL  LL F+ DE YG D+ +W  GI  P+   + E   RL + L   MI A K+ L+    C  +  FLNF+ + A SYN L+   RRN++ +DW    H +SLLN +     SA + N+RK+CC  G   V     D+ E + +L +                              NG D    E        YA I+                         Y++SG             G C++C++   +P +TPC HLLC  CV  +   C + GC + Y M   +              PKDLIELQP +   DW P+W ++ S+K+ YLV K++ L Q        + E+ C        S + +     ++  E+    TD  K L    L  S+ L+  +I ++  Q  V    F         Y++ K++  F  +E    LLM+    A+GLDLSFV ++FL+EP+WD + E Q+ISRAHR+G    I VE L M G+IEE M+  LQ +
Sbjct:  739 RLYLSRATLIVVPSNLVDHWKTQIQRHVRPDQLRLCVWTDHKK--PSAHSLAWNYDIVITTFSRLSAEWGAHKQSP--LMQVHWHRVMLDEGHTLGSSLNLTNKLQMAISLTASNRWLLTGTPTPSMPNSQLSHLQPLLKFLHDEVYGDDQKSWEAGILKPFESEREEGRSRLLQLLHRCMISARKTDLQTIPPCIKKVTFLNFTEEHARSYNELVETVRRNILMADWNDPSHVESLLNPKQWKFRSATIRNVRKSCCVAGHIKVTDAGQDIQETMDMLFE------------------------------NGLDPLSEE--------YALIKY------------------------YLLSG-------------GECARCKEGCRLPIITPCRHLLCLDCVALDGERCTLPGCGFLYEMQSPETSSRPENPNPKWPVPKDLIELQPSYKQDDWNPDWQSTSSSKVTYLVEKLKALQQANREMGFSINEDNCTNHIDKLNSPSELNNASALLQQEYSRLQTDSYKGLPAKVLVFSQFLE--HIHVIEEQLTVGGIRFAGMYSPMHSYNKIKSLATFQHDESCMALLMDGS-AALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGATRPIQVETLAMCGTIEEQMVGFLQDA 1311          
BLAST of Gcaud1656.t1 vs. uniprot
Match: A0A061SJE6_9CHLO (F-box protein (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SJE6_9CHLO)

HSP 1 Score: 286 bits (731), Expect = 1.420e-80
Identity = 212/676 (31.36%), Postives = 313/676 (46.30%), Query Frame = 0
Query:  201 EQIYLSRATLVVVPSVLTEHWMHQIDLHVEMEGLSVLRVHSHRDLPDTALELAANYDIIIVPFDFIAN------LRHEIRQGMPLLLKVHFYRVIVDEGHRISSS-HMSNFAVGCDKIKTDIRWVMTGTPTPYTP-RTDVDHLYSLLTFIRDEAYGLDKDAWRVGIRDPYMRYKTESLDRLARHLESVMIRADKS-ILKAK-CHVRNIFLNFSADTAESYNGLIRMGRRNLITSDWFHEDHEQSLLNKRNKGLASAFVSNLRKACCFGGSQDVRIYTNDVVEVLLLLRDKHKHSSHAAEDECFRYPVLEENVDIETGQQNGYDQYYLEDLLRRRDWYAKIRSENRSMMQIERQNPKRGPNEPRYISYVVSGKLLKIAKALLRKIGTCSQCQKALDIPFVTPCAHLLCDGCVVGNRTACAVQGCHYKYNMG---------RNQEPK-----DLIELQPCFF--------ASDWMPNWDTSESAKMRYLVNKIEQLPQVEVWEEGCSEA-----------RMVRPKVIIHSEHTDHLKLAQLYLKESEALKDSYIDIVRNQRDVSDFVKKCRSPAEYSRKAIRAFAENEDASILLMNSRLGAVGLDLSFVRYIFLLEPLWDSAQEMQIISRAHRIGCVGDIVVERLIMRGSIEEAMLMELQSSVNAVEEGSAAGMASA 833
            E ++LS ATLV+VP  L  HW++QI+ HV       LRVH +      A +LA+ +D+++     ++       +R    +    LL VH+ R+I+DEGH +  S  M++       ++ D RW+MTGTPTP +P +  + HL  LL F+R+  YG+ + AW   I  P    + E   RL R L  +M RA K+ +LK   C  R   L F A+ A SYN L+ + RRN++ +DW  EDH +SLL+K N+  A   +SN+R +CC  G+ ++ +  +D+ E L LL  +H H++  A  +    P                             W A                    P  P           L   +   R    C  C + L +P VTPCAHLLC  C+  +   C + GC  ++ M           N+ PK     +LIELQP +           DW PNW  ++S K  Y++ ++E+L       +    A           R  R K I+ S+   HL LA  +L+                R V     K    +     A+  F E+   ++LLM+   G+VGLDLSFV Y+ +LEP+ D++ E Q+ISRAHR+G  G ++VE L M G+ EE ML  LQ   +      A G+A A
Sbjct:   25 ELVHLSSATLVIVPPTLVHHWLNQIERHVRP---GTLRVHVYDGRLSPA-DLASGFDVVVATLTQLSTEWQSRTMRRISGKACSPLLLVHWQRLILDEGHMLGQSLAMTSRLAMATALRADCRWIMTGTPTPSSPSKVHLSHLQPLLAFLREAPYGVSRKAWVEAIERPVQARREEGRQRLLRLLRRIMTRASKAELLKLPPCRRRVTALAFQAEHARSYNQLVEVIRRNMLLADWNDEDHVESLLSKANRKWAQEMLSNVRLSCCVAGNCNLVVKESDLQETLELLAARHGHAAPKAPSDNEAPP-----------------------------WVA--------------------PEHP-----------LAAVEHACRHGAPCQGCGEPLRMPIVTPCAHLLCAPCLHSSPRQCPLAGCGEQFEMQSVSDPARLKNNRNPKWEVPFELIELQPAYAQQGAVGLSGGDWSPNWQATKSTKCAYMIRRLEELSITPSDPKAAGAAPGDDVSAGPDNRRPR-KAIVFSQFWMHLLLAAQHLE---------------MRGVGFCSLKGGMASRDKAAAVVRFQEDPALNVLLMDGS-GSVGLDLSFVGYVLILEPISDASLEEQVISRAHRMGAEGPVLVEILAMSGTAEEEMLW-LQHGSSGGSRPPAEGLAHA 618          
BLAST of Gcaud1656.t1 vs. uniprot
Match: A0A7C9ESQ1_OPUST (Uncharacterized protein n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9ESQ1_OPUST)

HSP 1 Score: 282 bits (722), Expect = 4.520e-80
Identity = 201/649 (30.97%), Postives = 311/649 (47.92%), Query Frame = 0
Query:  202 QIYLSRATLVVVPSVLTEHWMHQIDLHVEMEGLSVLRVHSHRDLPDTALELAANYDIIIVPFDFIANLRHEIRQGMPLLLKVHFYRVIVDEGHRISSS-HMSNFAVGCDKIKTDIRWVMTGTPTPYTPRTDVDHLYSLLTFIRDEAYGLDKDAWRVGIRDPYMRYKTESLDRLARHLESVMIRADKSILKA--KCHVRNIFLNFSADTAESYNGLIRMGRRNLITSDWFHEDHEQSLLNKRNKGLASAFVSNLRKACCFGGSQDVRIYTNDVVEVLLLLRDKHKHSSHAAEDECFRYPVLEENVDIETGQQNGYDQYYLEDLLRRRDWYAKIRSENRSMMQIERQNPKRGPNEPRYISYVVSGKLLKIAKALLRKIGTCSQCQKALDIPFVTPCAHLLCDGCVVGNRTACAVQGCHYKYNMGRNQ-------------EPKDLIELQPCFFASDWMPNWDTSESAKMRYLVNKIEQLPQVEVWEEGCSEARMVRPKVIIHSEHTDHLKLAQLYLKESEALKDS-------------YIDIVRNQRDVSDF-VKKCRSP--AEYSRKAIRAFAENEDASILLMNSRLGAVGLDLSFVRYIFLLEPLWDSAQEMQIISRAHRIGCVGDIVVERLIMRGSIEEAMLMELQSS 818
            ++YLSRATL+VVPS L +HW+ QI  HV ++ L V     H+     A  LA +YD++I  F  ++      R+  PL+ +VH+ R+++DEGH + SS +++N       +    RW++TGTPTP TP +   HL  +L F+RDEAYG +   W  GI  P+     E   RL + L+  MI A K+ L+    C  +   ++F  + A++YN L+   RRN++ +DW    H +SLLN +     SA + N+R +CC  G                     H   + A +D       ++E +D+    +NG D    E        YA                         +I Y +S              G C +C++   +P VTPC HLLC  C+  N   C   GC + Y M   +              PKDLIELQP +    W P+W ++ S+K+ YLV +++++          S+  M +     ++   D +  A+L  ++S    ++             +I ++  Q  ++        SP  A   +K++  F  +    +L+M+    A+GLDLSFV Y+FL+EP+WD + E Q+ISRAHR+G V  I VE L MRG+IEE ML  LQ++
Sbjct:   20 RMYLSRATLIVVPSNLVDHWVSQIQKHVRLDQLRVCAWTDHKK--PAAHNLAWDYDVVITTFSRLSA-EWNPRKRSPLM-QVHWLRIMLDEGHTLGSSVNVTNKMQMAVSLSASNRWILTGTPTPNTPNSQAAHLQPMLRFLRDEAYGENHKNWEAGILRPFEAEMEEGRLRLLQLLKRCMISARKADLRCIPPCIKKVTCIDFIEEHAKTYNELVVTVRRNILMADWNDPSHVESLLNPKQWKFRSATIRNVRLSCCVAG---------------------HIKVTDAGQD-------IQETMDVLV--ENGLDPLAEE--------YA-------------------------FIKYNLSYG------------GNCQRCEEWCRLPIVTPCRHLLCLDCIALNGEKCTFPGCGFSYEMQSPEILTRPENPNPKWPVPKDLIELQPSYKQDSWDPDWQSTCSSKIAYLVERLKEIQATN----KLSDRSMDKAN---YAGIRDFVSHAELCARQSNGSSETPAEKVLIFSQFLEHIHVIEQQLAIAGIKFTGMYSPMNASSKKKSLSNFQHDPTRMVLVMDGT-AALGLDLSFVTYVFLMEPIWDRSMEEQVISRAHRMGAVRPIYVETLAMRGTIEEQMLEFLQNT 581          
The following BLAST results are available for this feature:
BLAST of Gcaud1656.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUW0_9FLOR0.000e+058.38F-box protein n=1 Tax=Gracilariopsis chorda TaxID=... [more]
R7Q8B7_CHOCR1.060e-23043.76Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3ID03_9FLOR2.830e-16277.78F-box protein n=1 Tax=Gracilariopsis chorda TaxID=... [more]
A0A2V3ID19_9FLOR2.590e-10383.33F-box protein n=1 Tax=Gracilariopsis chorda TaxID=... [more]
M2X6V7_GALSU1.430e-10131.07SNF2 domain-containing protein n=1 Tax=Galdieria s... [more]
A0A835N525_9ROSI2.830e-8232.47Uncharacterized protein n=7 Tax=Saliceae TaxID=238... [more]
A0A151RNK3_CAJCA9.250e-8228.36F-box protein At3g54460 family n=2 Tax=Cajanus caj... [more]
A0A7J7D7V4_TRIWF1.460e-8132.37Uncharacterized protein n=1 Tax=Tripterygium wilfo... [more]
A0A061SJE6_9CHLO1.420e-8031.36F-box protein (Fragment) n=1 Tax=Tetraselmis sp. G... [more]
A0A7C9ESQ1_OPUST4.520e-8030.97Uncharacterized protein n=2 Tax=Opuntia streptacan... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 28..354
e-value: 4.0E-12
score: 56.3
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 86..341
score: 9.924355
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 717..791
e-value: 0.0012
score: 28.1
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 675..791
e-value: 6.4E-6
score: 26.5
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 651..826
score: 9.458276
IPR000330SNF2, N-terminalPFAMPF00176SNF2-rel_domcoord: 35..437
e-value: 1.7E-48
score: 165.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 609..882
e-value: 3.5E-24
score: 87.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..383
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 284..819
IPR038718SNF2-like, N-terminal domain superfamilyGENE3D3.40.50.10810coord: 188..384
e-value: 8.8E-21
score: 76.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 921..967
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 942..967
NoneNo IPR availablePANTHERPTHR45626TRANSCRIPTION TERMINATION FACTOR 2-RELATEDcoord: 2..139
NoneNo IPR availablePANTHERPTHR45626:SF14OS01G0952200 PROTEINcoord: 200..843
coord: 2..139
NoneNo IPR availablePANTHERPTHR45626TRANSCRIPTION TERMINATION FACTOR 2-RELATEDcoord: 200..843
NoneNo IPR availableCDDcd18008DEXDc_SHPRH-likecoord: 91..383
e-value: 5.43221E-45
score: 160.531
NoneNo IPR availableCDDcd18793SF2_C_SNFcoord: 649..802
e-value: 2.96618E-17
score: 77.1316
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 574..606
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 592..601

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_34_length_72082_cov_4.421108contigNODE_34_length_72082_cov_4.421108:50791..53694 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1656.t1Gcaud1656.t1Gracilaria caudata M_176_S67 malemRNANODE_34_length_72082_cov_4.421108 50791..53694 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1656.t1 ID=Gcaud1656.t1|Name=Gcaud1656.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=968bp
MLPARDHATLSATHSYLRKFLASVVPGMKLRLYPHQMSALERMSQMEEDS
ITDDMPLIYDFKVHDLRHAVIVADLADGSIYELASFPRVTRPKGGLLCDE
PGLGKTITTLSHILKTLGREPKPPANRETHVVEMEGIKVTSYTEQITTRY
ESLDTRRKSTSRMGRLMPALGNHKPKRRIQRPNFFQSGKGQGILPMCSGT
EQIYLSRATLVVVPSVLTEHWMHQIDLHVEMEGLSVLRVHSHRDLPDTAL
ELAANYDIIIVPFDFIANLRHEIRQGMPLLLKVHFYRVIVDEGHRISSSH
MSNFAVGCDKIKTDIRWVMTGTPTPYTPRTDVDHLYSLLTFIRDEAYGLD
KDAWRVGIRDPYMRYKTESLDRLARHLESVMIRADKSILKAKCHVRNIFL
NFSADTAESYNGLIRMGRRNLITSDWFHEDHEQSLLNKRNKGLASAFVSN
LRKACCFGGSQDVRIYTNDVVEVLLLLRDKHKHSSHAAEDECFRYPVLEE
NVDIETGQQNGYDQYYLEDLLRRRDWYAKIRSENRSMMQIERQNPKRGPN
EPRYISYVVSGKLLKIAKALLRKIGTCSQCQKALDIPFVTPCAHLLCDGC
VVGNRTACAVQGCHYKYNMGRNQEPKDLIELQPCFFASDWMPNWDTSESA
KMRYLVNKIEQLPQVEVWEEGCSEARMVRPKVIIHSEHTDHLKLAQLYLK
ESEALKDSYIDIVRNQRDVSDFVKKCRSPAEYSRKAIRAFAENEDASILL
MNSRLGAVGLDLSFVRYIFLLEPLWDSAQEMQIISRAHRIGCVGDIVVER
LIMRGSIEEAMLMELQSSVNAVEEGSAAGMASAKAEKDHQRRRSIFLNMR
PVKSMEQLARDGQEAGLVAKMTEMNAYEEKVALTQGIAEDGDGGEEGHTV
EERWCDADGVDMRRQLMEARKRTAEHRFAGSSLTQTAGDEEERLGGQSDG
GDWKRARRRVRFDDEEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR000330SNF2_N
IPR027417P-loop_NTPase
IPR038718SNF2-like_sf
IPR017907Znf_RING_CS