Gcaud1654.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1654.t1
Unique NameGcaud1654.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length449
Homology
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BLAST of Gcaud1654.t1 vs. uniprot
Match: A0A2V3IUY5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUY5_9FLOR)

HSP 1 Score: 371 bits (952), Expect = 1.550e-123
Identity = 184/299 (61.54%), Postives = 233/299 (77.93%), Query Frame = 0 
Query:  154 RRSHIG-FRAPDLP--DVVSEMWNNLSLVPYHNSQLNVIVLFTNAIRAELNDMKFLLCLMRDTTCSANSPRSLRNLNTDFELWFSRFSHFVHLIMYCVQTKLFPLVEQFLNKRDVMTSRCIASTEV-AGMSYIQAWKTTCSSLHMSISQLLQHMCTAENRVLLLTAKRRLRSNGNRVHLLASASESLAVLHRSFSKFLDSLDMACERVVYLKASTPLCKQLLEEFVSAVVTEGTKDLPPLGWSACITFTRWIESKKMRNEMVGRLARIAKISVLGRCLADQSHHAVVRLYRMVWAKRAG 448
            RRSH+G F        DV+S +W+N+ LVP+ N  + + ++FTNAIRAELNDM+FLL L+RDTT S+++PRSL+NL+ DFELWF RFSHFV L+  CVQ +LF  V+Q L++RDVMTSRC+ASTEV  GMSY+QAWK+TC +LH SIS+ +  +CTAENRVLLLTA+RR+RSNGNR+HLLASA+E ++ +HR     L SLD ACE V+ L      C ++L  FV  +V  G ++LP LGWSACIT TRWIESKK R E+V +LAR+AK+SVLGRCLADQSHH V+R+YR +WAKRAG
Sbjct:   30 RRSHVGAFGGAHTAGADVISALWHNIPLVPFQNHCIQLSIVFTNAIRAELNDMRFLLYLLRDTTRSSSTPRSLKNLDGDFELWFCRFSHFVQLLFVCVQEELFQGVQQLLDRRDVMTSRCVASTEVDGGMSYVQAWKSTCQALHSSISRAVHQLCTAENRVLLLTARRRIRSNGNRMHLLASATECISAVHRVLVPLLHSLDTACESVLSLNVGQSACDRILGRFVKRLVHCGGRELPALGWSACITLTRWIESKKTRGEVVSKLARLAKVSVLGRCLADQSHHTVIRVYRQIWAKRAG 328
The following BLAST results are available for this feature:
BLAST of Gcaud1654.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IUY5_9FLOR1.550e-12361.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_34_length_72082_cov_4.421108contigNODE_34_length_72082_cov_4.421108:43327..44673 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1654.t1Gcaud1654.t1Gracilaria caudata M_176_S67 malemRNANODE_34_length_72082_cov_4.421108 43327..44673 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1654.t1 ID=Gcaud1654.t1|Name=Gcaud1654.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=449bp
MTAPSLPSCVSVTSTSFHSPPSNSSVRCPSHTPSPPTLTTLKPLSLPLDK
QRPSPPLPSPTTPLSFTADLPALRAPPQTPPSVGSDLTRSTPSPAPLIRP
HAARVRSDFDKKVAPLSTRSSTLAAARLRSTTRRQRRAVSQMVSDVSSSF
DQRRRSHIGFRAPDLPDVVSEMWNNLSLVPYHNSQLNVIVLFTNAIRAEL
NDMKFLLCLMRDTTCSANSPRSLRNLNTDFELWFSRFSHFVHLIMYCVQT
KLFPLVEQFLNKRDVMTSRCIASTEVAGMSYIQAWKTTCSSLHMSISQLL
QHMCTAENRVLLLTAKRRLRSNGNRVHLLASASESLAVLHRSFSKFLDSL
DMACERVVYLKASTPLCKQLLEEFVSAVVTEGTKDLPPLGWSACITFTRW
IESKKMRNEMVGRLARIAKISVLGRCLADQSHHAVVRLYRMVWAKRAG*
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