Gcaud1657.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1657.t1
Unique NameGcaud1657.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length353
Homology
BLAST of Gcaud1657.t1 vs. uniprot
Match: A0A2V3IUV6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUV6_9FLOR)

HSP 1 Score: 419 bits (1078), Expect = 4.510e-144
Identity = 217/332 (65.36%), Postives = 260/332 (78.31%), Query Frame = 0
Query:   18 LSRDPLHDAKSQPNLSLSPSTSTASPPRARPNGTEQTNEPRLTALNRAQKLCAVKYGAGSTWVSDAYVLAHNAIKRQLISLYDIVDSIASRAHLIQDMELDQFATWWATFDAFVTEYFDFEADVLLNWANADARVMAELKDACLEQIRQICGTFELRRYVDATDLFFTVVREVDAMVPKLLHYFSALHAHLSPLIRATHAPKDVVALTRLYVTYIKKGDNPHVHLVLLTRWMDARMKEKWIRTYIRGLSRLLYRRWERHTLRSHVSIVAAFRKRAMKEARKTAASRIRRRTEFGEDVDEISFGSIPSHAGSIRSLNITKSKLRKNASRSTGR 349
            LSR PL+DA+SQP L L  + S+A PP AR         P +T   R  +L A KY A ++W SDAY LAHNAIKRQL SLYDI+DSIASR H +   ELD FA WW   + F+TEYFDFEADVLLNWA AD   +A LK  CL+ IRQ+CGTFELRRYVD TDLF T+VREV+A+VP LLHY SAL AHLSPLIRA H+P+ VVALTR YV Y+KKG+NPHVHLVLLT WM +R+K+KWI TY+RG SRLL+RRWER+T R+H++IVAAFR RA+KEAR+TAASRIRRRTEFGE VD++SFGS+PS  GSIRSLN+  ++++++ SRS  R
Sbjct:   10 LSRHPLNDARSQPTLRLHTAPSSA-PPNAR-------LPPPVT---RPAQLSAAKYAAPASWHSDAYTLAHNAIKRQLASLYDIMDSIASRIHHVVGAELDTFARWWRVLEPFITEYFDFEADVLLNWAAADPSALAHLKHLCLDHIRQLCGTFELRRYVDPTDLFCTIVREVNALVPHLLHYMSALDAHLSPLIRARHSPQSVVALTRSYVAYVKKGENPHVHLVLLTTWMKSRVKDKWINTYVRGFSRLLFRRWERYTARTHIAIVAAFRTRAVKEARRTAASRIRRRTEFGEHVDDVSFGSMPSVGGSIRSLNVAVARVKRDLSRSANR 330          
BLAST of Gcaud1657.t1 vs. uniprot
Match: A0A7S1XGN0_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XGN0_9RHOD)

HSP 1 Score: 107 bits (266), Expect = 7.330e-23
Identity = 77/254 (30.31%), Postives = 127/254 (50.00%), Query Frame = 0
Query:   61 ALNRAQKLCAVKYGAGSTWVSDAYVLAHNAIKRQLISLYDIVDSIASRAHLIQDMELDQFATWWATFDAFVTEYFDFEADVLLNW---ANAD-------ARVMAELKDA---CLEQIRQICGTFELRRYVDATDLFFTVVREVDAMVPKLLHYFSALHAHLSPLIRATHA--PKDVVALTRLYVTYIKKGDNPHVHLVLLTRWMDARMK-EKWIRTYIRGLSRLL-YRRWERHTLRSHVSIVAAFRKRAMKEAR 297
            AL    +L  V     + W  + + L HNAI+R+LI LY I+ ++  R       E ++F+ WW+ F AFV EYFD EA +LL     A  D       A +M +++DA    ++++R++    E    +   D+F  + + +D  VP LL YF      L   I   H+   KDV+   +    ++  G  P + +V+L+ WMD + +   W +  +RG +R + ++RWE   LR+H  IV  F    ++ +R
Sbjct:   34 ALLNLPRLYIVDSDMTTGWAQEVFSLPHNAIRRELIDLYTILGAVYKRNARTAREEDEKFSHWWSVFSAFVEEYFDIEARILLPLIGPAEEDPVHKQDIAVLMYQMEDARIKLVKKLREVNEVVEKLFVLPMKDVFPLLCKALDHFVPMLLDYFIEEEDVLPSYILGFHSLVMKDVIL--QKMADFVLVGREPQLFIVMLSAWMDDKEQLSNWKKKALRGYNRFINFQRWESKYLRTHKKIVEDFHGSVLRNSR 285          
BLAST of Gcaud1657.t1 vs. uniprot
Match: A0A1X6NIZ5_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NIZ5_PORUM)

HSP 1 Score: 83.2 bits (204), Expect = 9.260e-15
Identity = 62/225 (27.56%), Postives = 103/225 (45.78%), Query Frame = 0
Query:   76 GSTWVSDAYVLAHNAIKRQLISLYDIVDSIASRAHLIQDMELDQFATWWATFDAFVTEYFDFEADVLLNWANADARVMAELKDACLEQIRQIC-GTFE--LRRYVDATDLFFT------VVREVDAMVPKL--LH-YFSALHAHLSPLIRATHAPKDVVALTRLYVTYIKKGDNPHVHLVLLTRWMDARMKEKWIRTYIRGLSRLLYRRWERHTLRSHVSIVAAF 288
            G+ W SD  V  HNA++R+ + LY ++D +  +   +    +D F  WW  F+ F     + E +V+     A   + A    A  +  R +  G F   LR+  D    F        V+  + A+V +L  +H Y++A  A L PLI A    ++  +  R    +++  D+  ++LVLLTRW+      KW    ++    L +  W R   R+H+ IV  F
Sbjct:   25 GTNWASDVVVFLHNAVRREFMDLYALLDLMQRKRRTLTHDLVDVFFEWWTDFETFCVASVNAETEVIFPPLTARTALTAS---AVRDSARMLANGKFVVGLRKVSDFRPSFTPHLPAGEVLPRLVALVAELSFIHGYYAAQEAALPPLIAAHFRKRNKASWERALTDHMRYADSYDMNLVLLTRWLRPSADTKWRVRNLKPAEHLSFGGWRRDAERNHLQIVDFF 246          
BLAST of Gcaud1657.t1 vs. uniprot
Match: A0A5J4Z8B5_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z8B5_PORPP)

HSP 1 Score: 83.6 bits (205), Expect = 2.400e-14
Identity = 59/255 (23.14%), Postives = 112/255 (43.92%), Query Frame = 0
Query:   58 RLTALNRAQKLCAVKYGAGSTWVSDAYVLAHNAIKRQLISLYDIVDSIASRAHLIQDMELDQFATWWATFDAFVTEYFDFEADVLLNWAN-----ADARVMAELKDACLEQIRQICGTFELRRYVDATDLFFT---------VVREVDAMVPKLLHYFSALHAHLSPLIRATHAPKDVVALTRLYVTYIKKGDNPH---VHLVLLTRWMDARMKEKWIRTYIRGLSRLLYRRWERHTLRSHVSIVAAFRKRAMKE 295
            R T + +   + A  YG    W  D   + HNAIK++++ +Y++V+ +      +   ++ +F  WW  F++F+ +YF+ E  V+  +       AD ++  + +     +I Q     +     D  D+F            V  +D   P+LL YF+     +   ++    P D V + +  V ++KK  +      ++V+ +RWM     + W R  +RG+ R+ Y  W       H  I A F  R +++
Sbjct:   93 RKTVIVKMPVVIATPYG--KLWSMDVLAVYHNAIKKEVMDMYNMVECMLRFQMSLGYDDVTRFFEWWDVFESFLMDYFELEEKVIFPYIAEKFDFADTKLSRQERMLTKARITQFLAQID-----DMEDIFINRPPGECLPRFVEFLDKFTPRLLGYFNTQETIVPRTLQKFFQPDDKVIIQQTCVDWLKKTKDATDFAENMVVQSRWMPEAQLQLWKRDSLRGMQRVAYPAWRGRVEAYHFVIPAEFGHRVLED 340          
BLAST of Gcaud1657.t1 vs. uniprot
Match: A0A2V3IEZ6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEZ6_9FLOR)

HSP 1 Score: 73.9 bits (180), Expect = 2.500e-11
Identity = 54/225 (24.00%), Postives = 101/225 (44.89%), Query Frame = 0
Query:   76 GSTWVSDAYVLAHNAIKRQLISLYDIVDSIASRAHLIQDMELDQFATWWATFDAFVTEYFDFEADVLLNWANADARVMAELKDACLEQIR----------QICGTFELRRYVDATDLFFTVVREVDAMVPK--LLHYFSALHAHLSPLIRATHAPKDVVALTRLYVTYIK---KGDNPHVHLVLLTRWMDARMKEKWIRTYIRGLSRLLYRRWERHTLRSHVSIV 285
            GSTW  D     HNAI+R+LI LY++VDS+  R H +   ++  F +WW  F +F+   F     V+  W +A   +   + DA +++++          +I      RR  D T     + R +  ++    ++ +  ++ + L  +I     P D   + +   +++    + D   +HL+L+   M+      W +   R L R+ YR   +    +H+S V
Sbjct:   56 GSTWALDLPARLHNAIRRELIDLYNMVDSMKRRVHQLGTADMRTFFSWWRLFSSFLKTVFLTHTQVIFPWLSAKTTLPDAVNDAHIQEVQDKLQALLKEFRIANEQLSRRAPDET-----LARIIKGLIHMHIIVQHLESVESALPDVIEQHFQPTDQKKIEKKVASFLHSHGRVDEKKMHLLLVANAMNPEALAAWNKMLPR-LIRISYRTANKRFHTTHLSAV 274          
BLAST of Gcaud1657.t1 vs. uniprot
Match: A0A7S1TJ03_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TJ03_9RHOD)

HSP 1 Score: 73.6 bits (179), Expect = 5.020e-11
Identity = 50/189 (26.46%), Postives = 84/189 (44.44%), Query Frame = 0
Query:   79 WVSDAYVLAHNAIKRQLISLYDIVDSIASRAHLIQDMELDQFATWWATFDAFVTEYFDFEADVLL----NW-----------ANADARVMAELKDACLEQIRQICGTFELRRYV--DATDLFFTVVREVDAMVPKLLHYFSALHAHLSPLIRATHAPKDVVALTRLYVTYIKKGDNPHVHLVLLTRWMD 250
            W  D   + HN I+++L+ LY +++SI  R+  I  +EL+ F +W+  F+A++ EYF FE  +L     +W             + A +  +L     E  +  C T  L ++   D  D+ + V  E+    P ++ YF      L   I      + +  L R Y  Y++   NP     L TRW+ 
Sbjct:   73 WARDVLAIPHNGIRKELVGLYIMLESIYCRSLAISALELEDFFSWFDEFEAYLNEYFRFEDRMLFPLLKSWDVTVSRPYVIQGKSRAEMRLDLASLLTEVAK--CSTLALDKHAKADMIDVLYKVGLEIP---PLIMEYFRQQETFLPAQIEKQANTERIQVLRRCYWEYVRTCCNPAWTFHLTTRWIS 256          
BLAST of Gcaud1657.t1 vs. uniprot
Match: A0A1X6NU68_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NU68_PORUM)

HSP 1 Score: 73.9 bits (180), Expect = 9.670e-11
Identity = 54/239 (22.59%), Postives = 95/239 (39.75%), Query Frame = 0
Query:   67 KLCAVKYGAGSTWVSDAYVLAHNAIKRQLISLYDIVDSIASRAHLIQDMELDQFATWWATFDAFVTEYFDFEADVLLNWANADARVMAELKDACLEQIRQICGTFELRRYVDATDLFFTVVREVDAMVPKLLH----------YFSALHAHLSPLIRATHAPKDVVALTRLYVTYIKKGDNPHVHLVLLTRWMDARMKEKWIRTYIRGLSRLLYRRWERHTLRSHVSIVAAFRKRAMKE 295
            K+    YG G  W  D  V  +NA++R+ + LY ++D +  +  L+    ++ F  WWA F  F     +   D +     A   +  +        +        L++  D    F +  +    M+P LL           Y+++L   + P+I      +D     R    ++++GDN  +++ LL RW+    + KW    +R      Y  W R   R H  I+  F  R + E
Sbjct:  287 KIVLAPYGDGD-WARDVVVFLNNAMRREFMDLYALLDIMQRKKSLLTHDVIESFFDWWADFQVFCLAAVNAATDEVFPPITAREPITHQKVRQSSRMLTNGRFLVILQKITDYQSQF-SRSKPAGEMLPGLLALVDELSFIHTYWASLEEVIPPVIAVHFRKRDKALWERRIAAHVRRGDNYDLNMALLGRWLSTAAEAKWKVANLRTSEHFTYGTWVREAERVHYRILKNFENRLVSE 523          
BLAST of Gcaud1657.t1 vs. uniprot
Match: A0A7S0ZBK7_9RHOD (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZBK7_9RHOD)

HSP 1 Score: 68.9 bits (167), Expect = 4.400e-9
Identity = 50/216 (23.15%), Postives = 101/216 (46.76%), Query Frame = 0
Query:   76 GSTWVSDAYVLAHNAIKRQLISLYDIVDSIASRAHLIQDMELDQFATWWATFDAFVTEYFDFEADVLLNWANADARV-MAELKDACLEQIRQ---------ICGTFEL-----RRYVDATDLFFTVVREVDAMVPKLLHYFSALHAHLSPLIRATHAPKDVVALTRLYVTYIKKGDNPHVHLVLLTRW-MDARMKEKWIRTYIRGLSRLLYRRWER 275
            G+ W  D ++   NA++++++ LY I +S++ R + ++  + + F+ W+  F   V      +  VL  W   + R+ + E++    + IR          I   F+      R + +  +L   ++R VD +   ++ YF      L   +RA  +P+DV A     + YI++  NPHV  ++LT W M+  ++ + +  Y+   + +    W R
Sbjct:  421 GTDWAKDLFLFYQNALRKEMMDLYYICNSMSKRQYFLEQEDFELFSLWFEVFRYGVFVILQIQKTVLYPWL--EERIDLTEIEPELEQSIRARRIDRISLIIDSIFDALEDTNRPHGERLEL---IIRLVDKISTDIIPYFKYELNALPNAVRAVFSPEDVEAFQMDALKYIRRVQNPHVLFLVLTDWIMNRELRHQLMTRYLTRSNYVTQMMWVR 631          
BLAST of Gcaud1657.t1 vs. uniprot
Match: A0A5J4YYV5_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYV5_PORPP)

HSP 1 Score: 66.2 bits (160), Expect = 2.730e-8
Identity = 57/239 (23.85%), Postives = 94/239 (39.33%), Query Frame = 0
Query:   71 VKYGAGSTWVSDAYVLAHNAIKRQLISLYDIVDSIASRAHLIQDMELDQFATWWATFDAFVTEYFDFEADVLL-----------NWANADARVMAELKDACLEQIRQICGTFELRRYVDATDLFFTVVREVDAMVPKLLHYFSALHAHLSPLIRATHAPKDVVALTRLYVTYIKKGDNPHVHLVLLTRWMDARMKEKWIRTYIRGLSRLLYRRWERHTLRSHVSIVAAFRKRAMKEARK 298
            + +G+   W  D  VL HNAI+R+++ +Y I+ +++    L  D ++ +    W  F  F+  YF FE   L                 D R   E     L+           R   +   L   +V  +D ++P+LLHY +     L   I+     K    L         K   P +  +L+    D  +   W + +I+G+S+L Y    +  L  H S V +   RA K  +K
Sbjct:  280 IDWGSSVLWDRDGLVLPHNAIRREMMDMYQILIALSVLKDLTDD-DMKRVKAHWDVFAKFIEVYFAFEEQHLFPTICMIDDSASERPIQDFRYQKEKIQKALKSGSNAVAVCTTRTDKETMGL---MVTRLDHVLPELLHYMNNEELKLPAYIKKYGDEKKKYQLEDAMFHMCVKSSEPTLSAILVRAIEDQELANAWKKEHIKGMSKLKYNSGYKKFLDIHWSTVESLYNRAKKVEKK 514          
BLAST of Gcaud1657.t1 vs. uniprot
Match: A0A5J4YIH3_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YIH3_PORPP)

HSP 1 Score: 63.5 bits (153), Expect = 1.310e-7
Identity = 66/261 (25.29%), Postives = 111/261 (42.53%), Query Frame = 0
Query:   47 RPNGTEQT---NEPRLTA--LNRAQKLCAVKYGAGSTWVSDAYVLAHNAIKRQLISLYDIVDSIASR-AHLIQDMELDQFATWWATFDAFVTEYFDFEADVLLNWA----NADARVMAELKDACLE---QIRQICGTF-----ELRRYVDATDLFFTVVREVDAMVPKLLHYFSALHAHLSPLIRATHAPKDVVALTR-LYVTYIKKGDNPHVHLVLLTRWMDARMKEKWIRTYIRGLSRLLYRRWERHTLRSHVSIVAAF 288
            R  GTE+T      R+    L    +L   +YG  S W  D +VL HNA++R ++ L  IV+S+  R  HL  D   D    WW  F   VTE F  E  V   W      A+ +V +E++ A  E   Q +Q+   F     EL +         ++ ++V  +V    +Y   +   L  LI      +D+ A+ + +  T + + D   ++  +L    +++     ++ Y+    R  Y +W ++    H  I   F
Sbjct:   16 RVQGTEETAHAERDRMAGIDLGNGHRLALEEYG--SCWSIDPFVLLHNAVRRDMVDLLIIVESVEMRRGHLTLDDRSD-LIEWWHFFQKIVTEMFALENRVFFPWVFKGTMANGKVDSEMQTAKGEIMFQQQQVSRKFVEISLELNQIKVLESGMASLCQKVRNVVIGFSYYLLDMEKRLRLLIEVRFKREDLSAVEKKMMTTVLTEPDGETIYAAILRGVANSKQLHH-VKAYLSRKQRHDYPQWVKNLETKHTHIPRKF 272          
The following BLAST results are available for this feature:
BLAST of Gcaud1657.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A2V3IUV6_9FLOR4.510e-14465.36Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1XGN0_9RHOD7.330e-2330.31Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
A0A1X6NIZ5_PORUM9.260e-1527.56Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
A0A5J4Z8B5_PORPP2.400e-1423.14Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A2V3IEZ6_9FLOR2.500e-1124.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1TJ03_9RHOD5.020e-1126.46Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6NU68_PORUM9.670e-1122.59Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0ZBK7_9RHOD4.400e-923.15Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
A0A5J4YYV5_PORPP2.730e-823.85Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A5J4YIH3_PORPP1.310e-725.29Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_34_length_72082_cov_4.421108contigNODE_34_length_72082_cov_4.421108:54762..55820 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1657.t1Gcaud1657.t1Gracilaria caudata M_176_S67 malemRNANODE_34_length_72082_cov_4.421108 54762..55820 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1657.t1 ID=Gcaud1657.t1|Name=Gcaud1657.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=353bp
MAGVSPRQRSFAVSTVLLSRDPLHDAKSQPNLSLSPSTSTASPPRARPNG
TEQTNEPRLTALNRAQKLCAVKYGAGSTWVSDAYVLAHNAIKRQLISLYD
IVDSIASRAHLIQDMELDQFATWWATFDAFVTEYFDFEADVLLNWANADA
RVMAELKDACLEQIRQICGTFELRRYVDATDLFFTVVREVDAMVPKLLHY
FSALHAHLSPLIRATHAPKDVVALTRLYVTYIKKGDNPHVHLVLLTRWMD
ARMKEKWIRTYIRGLSRLLYRRWERHTLRSHVSIVAAFRKRAMKEARKTA
ASRIRRRTEFGEDVDEISFGSIPSHAGSIRSLNITKSKLRKNASRSTGRL
GA*
back to top