Gcaud7959.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7959.t1
Unique NameGcaud7959.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length177
Homology
BLAST of Gcaud7959.t1 vs. uniprot
Match: A0A2V3J5P3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5P3_9FLOR)

HSP 1 Score: 300 bits (767), Expect = 1.550e-101
Identity = 142/176 (80.68%), Postives = 155/176 (88.07%), Query Frame = 0
Query:    1 MHADPNLPAQILAANPAWLTKVADAFATLNLPKPVVEWGHPALMTFLVLGMGAPGAYFGWAGRLNDDKKAGVQQKKLHENVMLAFFMLAFLGGTGGTLSVAMQGYDIWQSPHFLSAALVLFMLTVNSVLAYTGFTIGNDGTPKGRLQGRKLHAYFGAATMGVFLVHGVLGALILLG 176
            M  DPNLP  +LAANP WLTKVADA ATLNLPK +VEWGHP +M F+VLGMG PGAY GW GRLN DK+AGV QK+LHEN+M+AFF+LAFLGGTGGTLSVAMQGYDIWQSPHF+S+A+VL ML VNS LAY+GFTIGNDGTPKGRLQGRKLHAYFG ATM  FLVHG LGALILLG
Sbjct:   39 MALDPNLPTHLLAANPVWLTKVADAIATLNLPKWLVEWGHPGMMAFMVLGMGTPGAYIGWQGRLNPDKRAGVAQKRLHENIMIAFFLLAFLGGTGGTLSVAMQGYDIWQSPHFISSAVVLAMLAVNSTLAYSGFTIGNDGTPKGRLQGRKLHAYFGIATMLAFLVHGALGALILLG 214          
BLAST of Gcaud7959.t1 vs. uniprot
Match: A0A1X6PAT0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PAT0_PORUM)

HSP 1 Score: 206 bits (524), Expect = 2.340e-64
Identity = 99/159 (62.26%), Postives = 116/159 (72.96%), Query Frame = 0
Query:   12 LAANPAWLTKVADAFATLNLPKPVVEWGHPALMTFLVLGMGAPGAYFGWAGRLNDDKKAGVQQKKLHENVMLAFFMLAFLGGTGGTLSVAMQGYDIWQSPHFLSAALVLFMLTVNSVLAYTGFTIGNDGTPKGRLQGRKLHAYFGAATMGVFLVHGVLG 170
            LA NPAWL KV DA  TL  P  VV++GHP LM F++LGMG PG   GW GR N+DKKAGV+QK+LHEN+MLAF++LAF G TGG LS  MQG DI  SPH  +A +VL +LT N+V+AY+GFTIG   TP+GR QGR LHAY GA T    LVH  LG
Sbjct:   64 LATNPAWLVKVGDAVGTLPFPPAVVKYGHPGLMAFMILGMGLPGGVIGWLGRTNEDKKAGVKQKQLHENIMLAFWLLAFAGATGGVLSTVMQGKDILTSPHAKTAGVVLALLTANAVVAYSGFTIGGGATPEGRKQGRTLHAYLGAGTGIALLVHAGLG 222          
BLAST of Gcaud7959.t1 vs. uniprot
Match: A0A5J4YY69_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YY69_PORPP)

HSP 1 Score: 185 bits (470), Expect = 2.180e-56
Identity = 89/164 (54.27%), Postives = 119/164 (72.56%), Query Frame = 0
Query:   12 LAANPAWLTKVADAFATLNLPKPVVEWGHPALMTFLVLGMGAPGAYFGWAGRLNDDKKAGVQQKKLHENVMLAFFMLAFLGGTGGTLSVAMQGYDIWQSPHFLSAALVLFMLTVNSVLAYTGFTIGNDGTPKGRLQGRKLHAYFGAATMGVFLVHGVLGALILL 175
            +A NP WL  +A  F+   +P+PV ++GHP +M+ +V  MG  GAY GWAGRLN DKKAGV+QK+LHE +M+AF++LAF+G +GG LS  +QGYDI +S H  SA LVL +LT+ +++AY+GF      TPK ++QGRK+HAY GAATM  FLVH   G  +LL
Sbjct:   57 IAENPKWLETLAKGFS--GVPEPVTKYGHPVMMSIMVAAMGGGGAYLGWAGRLNPDKKAGVKQKQLHEQLMVAFWLLAFMGASGGILSTVLQGYDILESEHAKSAGLVLALLTLEAIIAYSGF----GSTPKAKIQGRKVHAYIGAATMAAFLVHAGFGIQMLL 214          
BLAST of Gcaud7959.t1 vs. uniprot
Match: A0A7S3EPF5_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EPF5_9RHOD)

HSP 1 Score: 182 bits (461), Expect = 3.700e-55
Identity = 92/159 (57.86%), Postives = 115/159 (72.33%), Query Frame = 0
Query:   14 ANPAWLTKVADAFATLNLPKPVVEWGHPALMTFLVLGMGAPGAYFGWAGRLNDDKKAGVQQKKLHENVMLAFFMLAFLGGTGGTLSVAMQGYDIW--QSPHFLSAALVLFMLTVNSVLAYTGFTIGNDGTPKGRLQGRKLHAYFGAATMGVFLVHGVLG 170
            ANP  + KVAD   TL LP  V++WGHPA+M F+V GMG PGA FGW GRL   K++ V+ K LHE VM+AF++LAF G  GG+LS+A QG++IW  Q PHF+SA  VL +LT N+V AY+GF      TP  +L+GR +HAY GA TMGVF+VHGVLG
Sbjct:   43 ANPVVIQKVADYVGTLGLPPFVIKWGHPAMMAFMVAGMGMPGAAFGWIGRLGKGKES-VKMKNLHEQVMVAFWLLAFAGALGGSLSLAGQGHEIWTLQDPHFVSALAVLGLLTANAVYAYSGF---GGSTPAEKLKGRTVHAYLGALTMGVFVVHGVLG 197          
BLAST of Gcaud7959.t1 vs. uniprot
Match: M1VMD0_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VMD0_CYAM1)

HSP 1 Score: 174 bits (441), Expect = 1.240e-51
Identity = 89/177 (50.28%), Postives = 119/177 (67.23%), Query Frame = 0
Query:    6 NLPAQILAANPAWLTKVADAFATLNLPKPVVEWGHPALMTFLVLGMGAPGAYFGWAGRLNDDKKAGVQQKKLHENVMLAFFMLAFLGGTGGTLSVAMQGYDIWQSPHFLSAALVLFMLTVNSVLAYTGFTIGNDGTPKGR------LQGRKLHAYFGAATMGVFLVHGVLGALILLG 176
            N+ A+    NP  + ++AD F TL++P+PVVE+GHP +MT +V  MG  GAY GWAGRLN DK+AGV+QK+ H  VM AF +LAFLG +GG LSVAMQG+ + QS H LSA LVL +L+ N + A TGF     G+ +GR       QGR++HAY G A +   L+H  LG  +++G
Sbjct:   68 NVAAEEAVQNPLVIQRIADYFKTLSIPEPVVEYGHPVMMTIMVAAMGLGGAYLGWAGRLNPDKRAGVKQKQTHATVMGAFTLLAFLGASGGMLSVAMQGFPVGQSAHALSAVLVLVLLSFNGIYAGTGF---GAGSKRGREATEAAAQGRRVHAYLGVAIVAALLLHAFLGLQMIIG 241          
BLAST of Gcaud7959.t1 vs. uniprot
Match: M2VVN4_GALSU (Cytochrome b561 domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VVN4_GALSU)

HSP 1 Score: 172 bits (435), Expect = 5.890e-51
Identity = 82/164 (50.00%), Postives = 111/164 (67.68%), Query Frame = 0
Query:   11 ILAANPAWLTKVADAFATLNLPKPVVEWGHPALMTFLVLGMGAPGAYFGWAGRLNDDKKAGVQQKKLHENVMLAFFMLAFLGGTGGTLSVAMQGYDIWQSPHFLSAALVLFMLTVNSVLAYTGFTIGNDGTPKGRLQGRKLHAYFGAATMGVFLVHGVLGALIL 174
            + ++NP  + ++AD F TL +P+ V ++GHP +M  ++  +G   AY+GW GRLN DKK GVQQK  H N+   F++LAF G +GGTLSVAMQGY +W+S H LSA  VL  LTVN+ +A++GF      TP  R+ GRK+HAY G  TM + LVH +LG  IL
Sbjct:   62 VTSSNPFVIQRIADYFKTLGIPENVEKYGHPVMMGIMIAFLGGATAYYGWMGRLNPDKKKGVQQKSFHSNLATVFWLLAFAGASGGTLSVAMQGYPVWKSTHSLSAVAVLLGLTVNAWIAFSGF----GSTPTKRMSGRKVHAYLGTVTMVLLLVHSILGVSIL 221          
BLAST of Gcaud7959.t1 vs. uniprot
Match: A0A7S1XGV4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XGV4_9RHOD)

HSP 1 Score: 147 bits (371), Expect = 2.220e-41
Identity = 77/171 (45.03%), Postives = 104/171 (60.82%), Query Frame = 0
Query:    2 HADPNLPAQIL--AANPAWLTKVADAFATLNLPKPVVEWGHPALMTFLVLGMGAPGAYFGWAGRLNDDKKAGVQQKKLHENVMLAFFMLAFLGGTGGTLSVAMQGYDIWQSPHFLSAALVLFMLTVNSVLAYTGFTIGNDGTPKGRLQGRKLHAYFGAATMGVFLVHGVLG 170
            H     PA ++  AANP  L + AD F     PKP++E GHP +M  ++  +G  G   GW GRLN++KK GV+QK+ H  +M  F +LAF G +GGTLSV +QG DIWQS HF +A L+L ML +N ++A  GF     G  + R +GR  HA+FGAA + V + H   G
Sbjct:   46 HVLSVTPASMMMTAANPEILERAADLFRAT--PKPIMELGHPVMMGIMIATLGLAGVSLGWKGRLNENKKEGVEQKQFHAKLMSLFTVLAFAGASGGTLSVVLQGGDIWQSTHFQTACLMLGMLVINGLIAGAGF----GGNAESRKKGRTFHAWFGAAIVAVVIGHVATG 210          
BLAST of Gcaud7959.t1 vs. uniprot
Match: A0A7J7IRG4_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IRG4_9RHOD)

HSP 1 Score: 132 bits (331), Expect = 2.340e-36
Identity = 68/122 (55.74%), Postives = 83/122 (68.03%), Query Frame = 0
Query:   43 LMTFLVLGMGAPGAYFGWAGRLNDDKKAGVQQKKLHENVMLAFFMLAFLGGTGGTLSVAMQGYDIWQSPHFLSAALVLFMLTVNSVLAYTGFTIGNDGTPKGR---LQGRKLHAYFGAATMG 161
            +MT +V  MG  GAY GWAGRLN DK+AGV+QK+ H  +M AF +LAFLG +GG LSVAMQG+ + QS H LSA LVL +LT N + A TGF  GN    +      QGR+LHAY GA  +G
Sbjct:    1 MMTIMVAAMGLGGAYLGWAGRLNPDKRAGVKQKQTHATIMGAFTLLAFLGASGGMLSVAMQGFPVGQSAHSLSAVLVLVLLTFNGIYAGTGFGAGNKRGKEATEAIAQGRRLHAYLGAFIVG 122          
BLAST of Gcaud7959.t1 vs. uniprot
Match: UPI001681BBF5 (DUF4079 domain-containing protein n=1 Tax=Leptolyngbya sp. FACHB-17 TaxID=2692803 RepID=UPI001681BBF5)

HSP 1 Score: 122 bits (307), Expect = 1.950e-32
Identity = 61/155 (39.35%), Postives = 88/155 (56.77%), Query Frame = 0
Query:   19 LTKVADAFATLNLPKPVVEWGHPALMTFLVLGMGAPGAYFGWAGRLNDDKKAGVQQKKLHENVMLAFFMLAFLGGTGGTLSVAMQGYDIWQSPHFLSAALVLFMLTVNSVLAYTGFTIGNDGTPKGRLQGRKLHAYFGAATMGVFLVHGVLGALI 173
            L  +A  F +LNLP+P++ WGHP +M  +VL MG   A+ GW GRL +DK+  ++ +  H  +M    +   LG TGG LS+ MQ   I +SPHFL+  +VL +L +N  ++  GF     G        R  HAY G A  G+ L+HGV G ++
Sbjct:    9 LEPIAQFFRSLNLPEPIIHWGHPVMMGIVVLVMGGYSAWAGWRGRLAEDKEVALKNRADHRKLMPLVVLFMTLGATGGILSLVMQKKSILESPHFLTGIVVLGLLYLNGAVSLAGFGGNKPGL-------RLFHAYLGTAIAGIVLLHGVFGIML 156          
BLAST of Gcaud7959.t1 vs. uniprot
Match: K9UIM1_CHAP6 (Uncharacterized protein n=2 Tax=Chamaesiphon TaxID=217161 RepID=K9UIM1_CHAP6)

HSP 1 Score: 120 bits (301), Expect = 1.650e-31
Identity = 59/154 (38.31%), Postives = 90/154 (58.44%), Query Frame = 0
Query:   19 LTKVADAFATLNLPKPVVEWGHPALMTFLVLGMGAPGAYFGWAGRL--NDDKKAGVQQKKLHENVMLAFFMLAFLGGTGGTLSVAMQGYDIWQSPHFLSAALVLFMLTVNSVLAYTGFTIGNDGTPKGRLQGRKLHAYFGAATMGVFLVHGVLG 170
            L  +A  F  L+LP+P+  WGHP  M+ ++  MG  GAY GW GR+    + +A ++ K  H  +M   F    +G TGG LS+ +Q + +  SPHF +A ++L  LTVN+++A TGF    D  P    + RK HAYFG+  + + +VH ++G
Sbjct:    9 LEPIASQFRALSLPEPLTHWGHPFFMSIVMFAMGGYGAYAGWKGRILTASEPQAAIESKTEHRKIMPVMFAFMAIGATGGVLSLVIQKHAVMSSPHFWTATVLLTFLTVNALIAGTGF---GDNKP----EFRKFHAYFGSTILILMVVHALMG 155          
The following BLAST results are available for this feature:
BLAST of Gcaud7959.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5P3_9FLOR1.550e-10180.68Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6PAT0_PORUM2.340e-6462.26Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YY69_PORPP2.180e-5654.27Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S3EPF5_9RHOD3.700e-5557.86Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
M1VMD0_CYAM11.240e-5150.28Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
M2VVN4_GALSU5.890e-5150.00Cytochrome b561 domain-containing protein n=1 Tax=... [more]
A0A7S1XGV4_9RHOD2.220e-4145.03Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7J7IRG4_9RHOD2.340e-3655.74Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
UPI001681BBF51.950e-3239.35DUF4079 domain-containing protein n=1 Tax=Leptolyn... [more]
K9UIM1_CHAP61.650e-3138.31Uncharacterized protein n=2 Tax=Chamaesiphon TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025067Protein of unknown function DUF4079PFAMPF13301DUF4079coord: 37..175
e-value: 4.7E-14
score: 52.8
NoneNo IPR availableGENE3D1.20.120.1770coord: 7..175
e-value: 3.7E-6
score: 28.2
NoneNo IPR availablePANTHERPTHR36738EXPRESSED PROTEINcoord: 20..171
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..101
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 102..112
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 153..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..60
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..132
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 176..176
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 133..152
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 61..80
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..37
NoneNo IPR availableTMHMMTMhelixcoord: 153..175
NoneNo IPR availableTMHMMTMhelixcoord: 113..132
NoneNo IPR availableTMHMMTMhelixcoord: 38..60
NoneNo IPR availableTMHMMTMhelixcoord: 81..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_344_length_29214_cov_4.056279contigNODE_344_length_29214_cov_4.056279:6575..7105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7959.t1Gcaud7959.t1Gracilaria caudata M_176_S67 malemRNANODE_344_length_29214_cov_4.056279 6575..7105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7959.t1 ID=Gcaud7959.t1|Name=Gcaud7959.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=177bp
MHADPNLPAQILAANPAWLTKVADAFATLNLPKPVVEWGHPALMTFLVLG
MGAPGAYFGWAGRLNDDKKAGVQQKKLHENVMLAFFMLAFLGGTGGTLSV
AMQGYDIWQSPHFLSAALVLFMLTVNSVLAYTGFTIGNDGTPKGRLQGRK
LHAYFGAATMGVFLVHGVLGALILLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025067DUF4079