Gcaud1780.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud1780.t1 vs. uniprot
Match: A0A2V3IX96_9FLOR (RRM domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX96_9FLOR) HSP 1 Score: 479 bits (1233), Expect = 2.150e-165 Identity = 271/421 (64.37%), Postives = 322/421 (76.48%), Query Frame = 0
Query: 1 MDDDWASDGEEEGLGDLSDIPDIDIPPQQRQNVAPPQ-KPVPPVVRERPPPRQNAWTKPIQSQQVRSAAQQPSXXXXXXXARGHHRRQNSFPASFGSKLDRFDSDPQRQQPRAPNAPTTTLYVANLPYETHEQAIGDFFSVNTIQVFGIRLMRHSDTGNIKAALVTIAADHVSKALATDGKLFGGRTIHVKVDGTDGKRGGRERDRGERGHNRTPSFGS-FGSRVPA-NGNQRSGTAWSERGPGHSFDSQLSRRTSDGSREDRRSRGGSHSKDPTIPTGPPPAGRKKLQLMPRTKPTPALQVDQGSTDAPKAPQSAMPAPGRQENDSLSHQKGSAAPRRVNSAGGDRFN-RNDRNADKFDRVERRDRGGKVFDDSASKRTNLKETSTTRPSSQPASKKEDDSKRPVLLNTFAALELNDSDA 417
MDDDWAS+GEEEGLGDLSDIPD+D+P Q + + P +P PVV PRQNAWTKP QSQQVRSA Q P+ R HRRQNSFPASFGS L+R R QPR+ PTTTLYV NLPY+THEQAIGDFF+ +++ V GIRL++H DTGNI+AALVT+ ADHV KALA DG++FGGRTI+VK+DGTDGKRG R GER +R PSFGS FG+R P NGN RS ++W +RGPGHS DSQL+RR SD +R+DRRSR +KDP+IP GPPPAGRKKLQLMPRTKP P LQVDQ + K PQSAMPAPGRQ+++ S + PRRVNS GG+R + R DR++D+FDRV+RRDRG ++ DDS +K TN KET+T+RPSSQP +KKEDDSKRPVL NTFAAL++ D DA
Sbjct: 1 MDDDWASEGEEEGLGDLSDIPDVDLPVQIKTPLPEPTPQPPAPVV-----PRQNAWTKPNQSQQVRSAVQSPAQHQQQPQGRALHRRQNSFPASFGSNLERPSQPAPRHQPRSHTGPTTTLYVTNLPYQTHEQAIGDFFTASSVHVVGIRLVKHPDTGNIRAALVTVVADHVPKALAVDGRMFGGRTIYVKIDGTDGKRGAR----GERSQSRNPSFGSSFGTRAPPLNGNARS-SSWHDRGPGHSIDSQLTRRASD-NRDDRRSRLAPLAKDPSIPVGPPPAGRKKLQLMPRTKPPPELQVDQRAISQQKPPQSAMPAPGRQDSEKFSQNRAGPPPRRVNSYGGERSSTRGDRSSDRFDRVDRRDRGPRM-DDSRNKWTNSKETATSRPSSQPTAKKEDDSKRPVLQNTFAALDIKDPDA 409
BLAST of Gcaud1780.t1 vs. uniprot
Match: R7Q424_CHOCR (Possible translation initiation factor eIF4, subunit H n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q424_CHOCR) HSP 1 Score: 152 bits (385), Expect = 7.030e-39 Identity = 138/346 (39.88%), Postives = 181/346 (52.31%), Query Frame = 0
Query: 107 RQQPRAP-NAP---TTTLYVANLPYETHEQAIGDFFSVNTIQVFGIRLMRHSDTGNIKAALVTIAAD-HVSKALATDGKLFGGRTIHVKVDGTDGKRGGRERDRGERGHNRTPSFGSFGSRVPA------NGNQRSGT---AWSERGPGHSFDSQLSRRTSDGSREDRRSRGGS--------HSKDPTIPTGPPPAGRKKLQLMPRTKPTPALQVDQGSTDA--PKAPQSAMPAPGRQENDSLSHQ---KGSAAPRRVNSAGGDRFNRNDRNADKFD-RVER----RDRGGKVFDDSASKRTNLKETSTTRPS--SQPASKKEDDSK-RPVLLNTFAALELNDSDA 417
R+QP +P +AP TTTLYV +LP++T E I F + + L RH+DTGNIKAALVTI + ++S LA DG GR +HVKVDG GG +R+R G FGS R+ A +G QR T W++R G FD R SRG +DPTIPTGPPPAGRKKL L PRTKP P L+VD + D P P S R EN S + ++ PR V + + + N + D +VE+ +D K + ++ KE + + S +Q ++KK+DDSK RPVLLNTFAALE+ND+DA
Sbjct: 28 RRQPSSPASAPAGSTTTLYVFHLPFDTSEVEIASLFRHCAVTPADVHLTRHNDTGNIKAALVTIRGEENLSAGLAVDGAKLSGRPVHVKVDGDRRGSGGGQRERSGYG------FGSKDRRMEAMPSSSPHGGQRDSTWSSGWTDRSGGGGFDQSSRGERGVEGRSAGASRGAGVTPRGASEQREDPTIPTGPPPAGRKKLVLKPRTKPPPVLEVDTRAIDGVKPSVPSSVSQPRHRFENSDPSKNLAMRQNSGPR-VTAPLSEGADPNPKEVTPADPKVEKWTTPKDATAKT---QGERWSSAKEGAPQKASGTAQGSNKKDDDSKKRPVLLNTFAALEVNDADA 363 The following BLAST results are available for this feature:
BLAST of Gcaud1780.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud1780.t1 ID=Gcaud1780.t1|Name=Gcaud1780.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=418bpback to top |