Gcaud8108.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8108.t1
Unique NameGcaud8108.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length297
Homology
BLAST of Gcaud8108.t1 vs. uniprot
Match: A0A139AR59_GONPJ (Uncharacterized protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AR59_GONPJ)

HSP 1 Score: 172 bits (435), Expect = 1.840e-47
Identity = 93/224 (41.52%), Postives = 135/224 (60.27%), Query Frame = 0
Query:   41 DVVVSQLQYVYKKYMLEIEYLHDLSRKYCK--------------RPGM--YCLSDDYELEISYMRIRETRPKVIWEISPSHGYSTLWIMEALKANKNNGKLYSFDI-HDAVVSASSKSWEKYGWNFVLGDFKEQFLSNFKKYP--TPDYLFLDSLHNEEFARFYTTSLFPKILEVKRSVYVSLHDVYNPSFWADGPRSELRKEAKLPEWLPNEEGQVVLDWMVY 245
            DV++++   +YKKY  +++ +      +C+              R G    C+SDD ELE+ Y+RIRE +PKV+WEISP+ G+ST WI+ ALKAN N   LYSFD+ +D       +  +   W F  GDF +Q  +   + P  +P+Y+FLDS H+++FA++YTT LF   +   + +++SLHDVYNPSFW D  +   R     P W+PNEEG  VLDW+VY
Sbjct:   76 DVLITRYDELYKKYSSDLKAVRRAVADWCREKPKRTTPEEQVTFRQGWAHMCISDDIELEVGYLRIREAKPKVVWEISPADGFSTFWIISALKANGNGAILYSFDLANDPTQHLPLEMQKSIDWRFKKGDFHKQIDNVLAETPEHSPNYIFLDSYHSKDFAQYYTTELFR--MWPDKHIHISLHDVYNPSFWNDNIQG--RDLNVHPPWMPNEEGLAVLDWLVY 295          
BLAST of Gcaud8108.t1 vs. uniprot
Match: A0A101RJY2_9ACTN (Methyltransferase n=2 Tax=Streptomyces TaxID=1883 RepID=A0A101RJY2_9ACTN)

HSP 1 Score: 118 bits (295), Expect = 2.590e-28
Identity = 81/258 (31.40%), Postives = 130/258 (50.39%), Query Frame = 0
Query:   40 QDVVVSQLQYVYKKYMLEIEYLHDLSRKYCKRP-GMYCLSDDYELEISYMRIRETRPKVIWEISPSHGYSTLWIMEALKANKNNGKLYSFDIHDAVVSASSKSWEKYGWNFVLGDFKEQFLSNFKKYP-TPDYLFLDSLHNEEFARFYTTSLFPKILEVKRSVYVSLHDVYNPSFWADGPRSELRKEAKLPEWLPNEEGQVVLDWMVYNQHHVSGVYTVAEAHNKTVSDIVKKVRDNTFTSRLSTHGSANPTLFFTLK 295
            Q + +  +  +Y+ Y  +++ + +  R+    P  +    DD E EI+Y+ +RETRP+ + EI   HG+ST WI++A+K N  +G LYS+DI D VV    +      W F  GD +E    N +K P T D+LF+D+ H+  FAR+Y   L P    ++  + + +HDV++                + P  LP  EG VVL W+   ++     +T + AH   + D +  V+ N   S        NP +FFTL+
Sbjct:    3 QTIDIDHIIRLYRTYAHDLDQVREKQRELLAPPTSLKAQLDDIEAEITYLLLRETRPETVVEIGTFHGWSTTWILQAVKDN-GSGHLYSYDIVDHVVRNVPEQLSAGRWTFTQGDARE----NLEKIPDTADFLFIDAAHSARFARWYIQHLLP---HMRPGIPMCVHDVFH---------------GRRP--LPFTEGAVVLRWLADREN---AYFTASRAHAPEMYDRLNDVKRNLTLSHPLKDSRDNPMIFFTLR 232          
BLAST of Gcaud8108.t1 vs. uniprot
Match: A0A0M8TCT9_9ACTN (Methyltransferase n=1 Tax=Streptomyces sp. MMG1533 TaxID=1415546 RepID=A0A0M8TCT9_9ACTN)

HSP 1 Score: 116 bits (291), Expect = 9.990e-28
Identity = 81/248 (32.66%), Postives = 125/248 (50.40%), Query Frame = 0
Query:   50 VYKKYMLEIEYLHDLSRKYCKRP-GMYCLSDDYELEISYMRIRETRPKVIWEISPSHGYSTLWIMEALKANKNNGKLYSFDIHDAVVSASSKSWEKYGWNFVLGDFKEQFLSNFKKYP-TPDYLFLDSLHNEEFARFYTTSLFPKILEVKRSVYVSLHDVYNPSFWADGPRSELRKEAKLPEWLPNEEGQVVLDWMVYNQHHVSGVYTVAEAHNKTVSDIVKKVRDNTFTSRLSTHGSANPTLFFTLK 295
            +Y+ Y  +++ + +  RK    P  M    DD E EI+Y+ +R+TRP+ + EI   HG+ST+WI+ AL+ N   G LYS+D+ D VV           W F  GD +E    N +K P T D+LF+D+ H+  FAR+Y   LFP++      + V +HDV++      G R+           +P  EG VVL W+    +     +T + AH   + D +K V+ +          S NP +FF L+
Sbjct:   13 LYRTYADDLDRVREKQRKLLAPPTSMKAQLDDIEAEITYLLLRDTRPETVVEIGTFHGWSTIWILHALRDN-GTGHLYSYDMVDHVVRNVPDHLSAGRWTFTQGDARE----NLEKIPDTADFLFIDAAHSARFARWYIQRLFPRMTA---GIPVCVHDVFH------GRRA-----------MPFSEGAVVLRWLAERDN---AYFTPSRAHAPEIHDRLKDVKRSLALGLPLRESSHNPMIFFNLQ 232          
BLAST of Gcaud8108.t1 vs. uniprot
Match: A0A1I4S5U9_9ACTN (Predicted O-methyltransferase YrrM n=5 Tax=Actinomycetia TaxID=1760 RepID=A0A1I4S5U9_9ACTN)

HSP 1 Score: 117 bits (293), Expect = 1.890e-27
Identity = 80/261 (30.65%), Postives = 130/261 (49.81%), Query Frame = 0
Query:   37 ISGQDVVVSQLQYVYKKYMLEIEYLHDLSRKYCKRP-GMYCLSDDYELEISYMRIRETRPKVIWEISPSHGYSTLWIMEALKANKNNGKLYSFDIHDAVVSASSKSWEKYGWNFVLGDFKEQFLSNFKKYPTP-DYLFLDSLHNEEFARFYTTSLFPKILEVKRSVYVSLHDVYNPSFWADGPRSELRKEAKLPEWLPNEEGQVVLDWMVYNQHHVSGVYTVAEAHNKTVSDIVKKVRDNTFTSRLSTHGSANPTLFFTLK 295
            + G+ + +  +  +Y+ +  +++   +  R     P  M    DD E EI+Y+ +RE RP+ + EI   HG+ST WI+ AL+ N   G LYS+DI D VV    ++     W F  GD +E    N +K P   D+LF+D+ H+  FAR+Y   LFP++   +  + V +HDV++      G R+           LP  EG VVL W+   ++     +T + AH   + D +K ++ +            NP +FFTL+
Sbjct:   58 LGGRPIDLDHIGDLYRTFAEDLDRARERQRTLLAPPTSMKAQLDDIEAEITYLLLREARPETVVEIGTFHGWSTTWILRALRDN-GTGHLYSYDIVDHVVREVPETLSTGRWTFTQGDARE----NLEKIPEDADFLFIDAAHSANFARWYLQHLFPRL---RPGIPVCVHDVFH------GRRA-----------LPFTEGAVVLRWLAEREN---AYFTASRAHAPEIHDRLKDIKRSLALGHPVRESRDNPMIFFTLR 290          
BLAST of Gcaud8108.t1 vs. uniprot
Match: A0A553ZQC3_9ACTN (Class I SAM-dependent methyltransferase n=2 Tax=Streptomyces TaxID=1883 RepID=A0A553ZQC3_9ACTN)

HSP 1 Score: 115 bits (287), Expect = 3.930e-27
Identity = 87/258 (33.72%), Postives = 132/258 (51.16%), Query Frame = 0
Query:   41 DVV-VSQLQYVYKKYMLEIEYLHDLSRKYCKRPG--MYCLSDDYELEISYMRIRETRPKVIWEISPSHGYSTLWIMEALKANKNNGKLYSFDIHDAVVSASSKSWEKYGWNFVLGDFKEQFLSNFKKYPTP-DYLFLDSLHNEEFARFYTTSLFPKILEVKRSVYVSLHDVYNPSFWADGPRSELRKEAKLPEWLPNEEGQVVLDWMVYNQHHVSGVYTVAEAHNKTVSDIVKKVRDNTFTSRLSTHGSANPTLFFTL 294
            DVV V  L  +Y+KY  ++  + D  R + ++ G  M    DD E EI+Y+ +R+ RP+ + EI   +G+ST+WI+ AL+ N   G LYSFDI D VV           W F +GD +E    +  K P   DYLF+D+ H   FAR+YT +LFP    V   +  S+HDVY+                + P+  P  EG VV+ W+   +HHV   +T + A    V + + +V+ +   +    + + NP +FF L
Sbjct:    2 DVVSVDSLSKLYQKYENDLRAVRDSQRAFLEQRGKSMKAQLDDLEAEITYLLLRDHRPERVVEIGTFYGWSTMWILSALRDN-GTGHLYSFDIVDKVVRNVPAELSADRWTFTMGDVRE----HLGKIPDDTDYLFIDADHGARFARWYTENLFPA---VPAGIPTSVHDVYH---------------GRRPK--PLSEGSVVIKWLA--EHHVP-YFTPSLAKAPEVMEQLTEVKRDLGLAEPVRNSTDNPMIFFHL 231          
BLAST of Gcaud8108.t1 vs. uniprot
Match: A0A1B1MM98_STRLN (Class I SAM-dependent methyltransferase n=3 Tax=Streptomyces TaxID=1883 RepID=A0A1B1MM98_STRLN)

HSP 1 Score: 114 bits (284), Expect = 1.100e-26
Identity = 80/257 (31.13%), Postives = 125/257 (48.64%), Query Frame = 0
Query:   41 DVVVSQLQYVYKKYMLEIEYLHDLSRKYCKRP-GMYCLSDDYELEISYMRIRETRPKVIWEISPSHGYSTLWIMEALKANKNNGKLYSFDIHDAVVSASSKSWEKYGWNFVLGDFKEQFLSNFKKYP-TPDYLFLDSLHNEEFARFYTTSLFPKILEVKRSVYVSLHDVYNPSFWADGPRSELRKEAKLPEWLPNEEGQVVLDWMVYNQHHVSGVYTVAEAHNKTVSDIVKKVRDNTFTSRLSTHGSANPTLFFTLK 295
            D+ +  +  +Y+ Y  +++ + +  RK    P  +    DD E EI+Y+ +RE RP+ + EI   HG+ST W+++ALK N   G LYS+DI D V     +      W F  GD KE    N +K P T D+LF+D+ H+  FAR+Y   L P++   +  + V +HDV++                + P  LP  EG VVL W+   ++     +TV+ AH       +  V+              NP +FFTL+
Sbjct:    6 DIDIDHIIGLYRTYAHDLDRVREQQRKLLAPPTSLKAQLDDLEAEITYLLLREARPETVVEIGTFHGWSTTWLLQALKDN-GTGHLYSYDIVDHVARNVPERLRTGRWTFTQGDAKE----NLEKIPDTADFLFIDAAHSASFARWYIQHLLPRM---RPGIPVCVHDVFH---------------GRRP--LPFTEGAVVLRWLAEQENPY---FTVSRAHAPETHHRLNDVKRTLALGHPLRDSKDNPMIFFTLR 234          
BLAST of Gcaud8108.t1 vs. uniprot
Match: UPI000FF88514 (class I SAM-dependent methyltransferase n=1 Tax=Streptomyces cyaneus TaxID=1904 RepID=UPI000FF88514)

HSP 1 Score: 113 bits (283), Expect = 1.470e-26
Identity = 80/258 (31.01%), Postives = 127/258 (49.22%), Query Frame = 0
Query:   40 QDVVVSQLQYVYKKYMLEIEYLHDLSRKYCKRP-GMYCLSDDYELEISYMRIRETRPKVIWEISPSHGYSTLWIMEALKANKNNGKLYSFDIHDAVVSASSKSWEKYGWNFVLGDFKEQFLSNFKKYP-TPDYLFLDSLHNEEFARFYTTSLFPKILEVKRSVYVSLHDVYNPSFWADGPRSELRKEAKLPEWLPNEEGQVVLDWMVYNQHHVSGVYTVAEAHNKTVSDIVKKVRDNTFTSRLSTHGSANPTLFFTLK 295
            Q + +  +  +Y+ Y  +++   +  RK    P  +    DD E EI+Y+ +RETRP+ + EI   HG+ST WI++AL+ N   G LYS+D+ D VV    +      W F  GD +E    N +K P T D+LF+D+ H+  FAR+Y   LFP++   +  + V +HDV++                + P  LP  EG VVL W+   ++     +T + A    + D +  V+              NP +FFTL+
Sbjct:    3 QTIDLDHIIRLYRAYAGDLDRAREKQRKLLAPPTSLKAQLDDIEAEITYLLLRETRPETVVEIGTFHGWSTTWILQALRDN-GTGHLYSYDVVDHVVRNIPEQLSTGRWTFTQGDARE----NLEKIPDTADFLFIDAAHSASFARWYIRELFPRM---RPGIPVCVHDVFH---------------GRRP--LPFTEGAVVLRWLADQENTC---FTPSRARAPEIHDRLNDVKRTLDLGHPLRDSRDNPMIFFTLR 232          
BLAST of Gcaud8108.t1 vs. uniprot
Match: A0A1V0UFV6_STRVN (Methyltransferase n=20 Tax=Streptomyces TaxID=1883 RepID=A0A1V0UFV6_STRVN)

HSP 1 Score: 114 bits (284), Expect = 1.920e-26
Identity = 84/259 (32.43%), Postives = 125/259 (48.26%), Query Frame = 0
Query:   38 SGQDVVVSQLQYVYKKYMLEIEYLHDLSRKYCKRPG--MYCLSDDYELEISYMRIRETRPKVIWEISPSHGYSTLWIMEALKANKNNGKLYSFDIHDAVVSASSKSWEKYGWNFVLGDFKEQFLSNFKKYPTPDYLFLDSLHNEEFARFYTTSLFPKILEVKRSVYVSLHDVYNPSFWADGPRSELRKEAKLPEWLPNEEGQVVLDWMVYNQHHVSGVYTVAEAHNKTVSDIVKKVRDNTFTSRLSTHGSANPTLFFTL 294
            S +D+ V  +  +Y KY  ++  + D  R + +R G  M    DDYE EI+Y+ +RE RP+ + EI   +G+ST+WI+ AL+ N   G LYSFDI D VVS          W F  GD +E  L         DYLF+D+ H   F R+Y  ++FP    V+     S+HDV++                + P+  P  EG V++ W+     H    +T + A    V + + KV++    S        NP +FFTL
Sbjct:   26 SLRDLTVQAVSELYVKYQDDLRAVRDRQRDFLQRRGKSMKAQLDDYEAEITYLLLREYRPETVVEIGTFYGWSTMWILSALRDN-GIGHLYSFDIVDHVVSNVPDDLSAARWTFTKGDVRET-LGGIV--TGTDYLFIDADHGARFGRWYVENVFPM---VRPGTPTSVHDVFH---------------GRRPK--PISEGSVLMKWLA---EHDKSFFTSSAAKAPEVIEHLSKVKEELRLSTPVRDSRHNPMVFFTL 257          
BLAST of Gcaud8108.t1 vs. uniprot
Match: A0A117ECL6_STRSC (O-methyltransferase n=8 Tax=Streptomyces TaxID=1883 RepID=A0A117ECL6_STRSC)

HSP 1 Score: 112 bits (279), Expect = 1.000e-25
Identity = 80/262 (30.53%), Postives = 127/262 (48.47%), Query Frame = 0
Query:   37 ISGQDVVVSQLQYVYKKYMLEIEYLHDLSRKYCKRP-GMYCLSDDYELEISYMRIRETRPKVIWEISPSHGYSTLWIMEALKANKNNGKLYSFDIHDAVVSASSKSWEKYGWNFVLGDFKEQFLSNFKKYPTPD--YLFLDSLHNEEFARFYTTSLFPKILEVKRSVYVSLHDVYNPSFWADGPRSELRKEAKLPEWLPNEEGQVVLDWMVYNQHHVSGVYTVAEAHNKTVSDIVKKVRDNTFTSRLSTHGSANPTLFFTLK 295
            ++G+ + +  +  +Y+ +  +++   +  R     P  M    DD E EI+Y+ +RE RP  + EI   HG+ST WI+ AL+ N   G LYS+DI D VV     S     W F  GD +E    N  K P  D  +LF+D+ H+  FAR+Y   LFP +   +  + V +HDV++      G R+           LP  EG VVL W+    +     +T + A    + D +K ++ +   +      + NP +FFTL+
Sbjct:   24 LAGRTIDLDHISRLYRTFAADLDRARERQRTLLAPPHSMKAQLDDIEAEITYLLLREARPGTVVEIGTFHGWSTTWILRALRDN-GTGHLYSYDIVDHVVREVPDSLSAGRWTFTQGDARE----NLAKIPAADADFLFIDAAHSAGFARWYLAELFPLL---RAGIPVCVHDVFH------GRRA-----------LPFTEGAVVLRWLAERDNVP---FTASRARAPEIHDRLKDIKRSLALALPVRESTDNPMIFFTLR 257          
BLAST of Gcaud8108.t1 vs. uniprot
Match: A0A6B2XHF8_9ACTN (Class I SAM-dependent methyltransferase n=1 Tax=Streptomyces sp. SID13726 TaxID=2706058 RepID=A0A6B2XHF8_9ACTN)

HSP 1 Score: 111 bits (277), Expect = 1.110e-25
Identity = 81/258 (31.40%), Postives = 124/258 (48.06%), Query Frame = 0
Query:   40 QDVVVSQLQYVYKKYMLEIEYLHDLSRKYCKRP-GMYCLSDDYELEISYMRIRETRPKVIWEISPSHGYSTLWIMEALKANKNNGKLYSFDIHDAVVSASSKSWEKYGWNFVLGDFKEQFLSNFKKYP-TPDYLFLDSLHNEEFARFYTTSLFPKILEVKRSVYVSLHDVYNPSFWADGPRSELRKEAKLPEWLPNEEGQVVLDWMVYNQHHVSGVYTVAEAHNKTVSDIVKKVRDNTFTSRLSTHGSANPTLFFTLK 295
            Q + +  +  +Y+ Y  +++ + +  R     P  M    DD E EI+Y+ +RE RP+ + EI   HG+ST WI++ALK N   G LYS+DI D VV    +S     W F  GD KE    N +K P T D LF+D+ H+  FAR+Y   L P++   +  + V +HDV++                + P  LP  EG V+L W+       +  +T + AH       +  V+ +            NP +FFTL+
Sbjct:    3 QTIDLDHVVQLYRSYATDLDRVREKQRALLAPPLSMKAQLDDLEAEITYLLLREARPETVVEIGTFHGWSTTWILQALKDN-GTGHLYSYDIVDHVVRNVPESLSAGRWTFTQGDAKE----NLEKIPDTADLLFIDAAHSASFARWYLRHLMPRM---RPGIPVCVHDVFH---------------GRRP--LPFTEGAVLLRWLA---ERGTAFFTASRAHAPENHRRLNDVKHSLALGLPLKESKDNPMVFFTLR 232          
The following BLAST results are available for this feature:
BLAST of Gcaud8108.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A139AR59_GONPJ1.840e-4741.52Uncharacterized protein n=1 Tax=Gonapodya prolifer... [more]
A0A101RJY2_9ACTN2.590e-2831.40Methyltransferase n=2 Tax=Streptomyces TaxID=1883 ... [more]
A0A0M8TCT9_9ACTN9.990e-2832.66Methyltransferase n=1 Tax=Streptomyces sp. MMG1533... [more]
A0A1I4S5U9_9ACTN1.890e-2730.65Predicted O-methyltransferase YrrM n=5 Tax=Actinom... [more]
A0A553ZQC3_9ACTN3.930e-2733.72Class I SAM-dependent methyltransferase n=2 Tax=St... [more]
A0A1B1MM98_STRLN1.100e-2631.13Class I SAM-dependent methyltransferase n=3 Tax=St... [more]
UPI000FF885141.470e-2631.01class I SAM-dependent methyltransferase n=1 Tax=St... [more]
A0A1V0UFV6_STRVN1.920e-2632.43Methyltransferase n=20 Tax=Streptomyces TaxID=1883... [more]
A0A117ECL6_STRSC1.000e-2530.53O-methyltransferase n=8 Tax=Streptomyces TaxID=188... [more]
A0A6B2XHF8_9ACTN1.110e-2531.40Class I SAM-dependent methyltransferase n=1 Tax=St... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 41..278
e-value: 4.3E-16
score: 60.9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..296
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..27
score: 6.0
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 57..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_336_length_29381_cov_4.586787contigNODE_336_length_29381_cov_4.586787:10309..11199 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8108.t1Gcaud8108.t1Gracilaria caudata M_176_S67 malemRNANODE_336_length_29381_cov_4.586787 10309..11199 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8108.t1 ID=Gcaud8108.t1|Name=Gcaud8108.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=297bp
MGNGTKRNFLSEWKYVAFAICFLFGSCTYFGSTCLMISGQDVVVSQLQYV
YKKYMLEIEYLHDLSRKYCKRPGMYCLSDDYELEISYMRIRETRPKVIWE
ISPSHGYSTLWIMEALKANKNNGKLYSFDIHDAVVSASSKSWEKYGWNFV
LGDFKEQFLSNFKKYPTPDYLFLDSLHNEEFARFYTTSLFPKILEVKRSV
YVSLHDVYNPSFWADGPRSELRKEAKLPEWLPNEEGQVVLDWMVYNQHHV
SGVYTVAEAHNKTVSDIVKKVRDNTFTSRLSTHGSANPTLFFTLKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases