Gcaud2325.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2325.t1
Unique NameGcaud2325.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length851
Homology
BLAST of Gcaud2325.t1 vs. uniprot
Match: A0A2V3IPB0_9FLOR (Pre-B-cell leukemia transcription factor 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPB0_9FLOR)

HSP 1 Score: 1062 bits (2746), Expect = 0.000e+0
Identity = 543/853 (63.66%), Postives = 658/853 (77.14%), Query Frame = 0
Query:    2 LPPLPEDPLDIDEHAAFRPYDSMMFNFKVSDVDGGNLLKWYGGVYGGMATKAVGLVSGEGVLAGHAKDANCRVVWKSTTPPPEVFLNPETPKSASSASALVAATSSKDAYKDRQKGNSGSGQAAKADEGVAPASNRDQRSPVP--QSGFLGGGKYRGLVYIKLGDPLEARRVKVRTIVNEFDARRAGWSDDQLQDILRHTPLLEAAADTYFKGVMFQRPILPPGATTMPRTPRMELLGVDGALAVRKLSLNDVAFPEIMTGSFSFSVSDFSLSLKERDAKTGKASESKNGTQLSNGE--AHRSIDELTLSASLKGNAFLRLRLGSTEADADISKNEQGDIVAMVSSKNLDIHSFVGSGSEFFSGEAVRGTIDMNMGVNLNSRTGRGRIHIRNPSLGRLAFTSVGGEVLWRDQNVFLRKGSLKYRRSEYRVNAGYELPLEQGSDFKWNMNVNVQKANVRDIAQLVLSGNAVARAMQSPVNSAEQSRITHPNGPLWIQRLSQSHESGFETSVESWKVPTDVPFAEQVAYYRRMMKELDAPPKPKVRKKRYIRTRDAPLTLADLRGDVTGIISMKYDSRLGEISSSPSPAGVLLQAALDQLTRTSFSFRLVGADWMIGDIPIDNVQTLGSFEEGVLDIGTTLFQNQEQFGAEVDCRLTSAGSLQASAMLDNVPAGLMNRYVQAPVDIDGTCSGRLQVEGNITNPRALGRMVWTNASLNGKQVRGAKTDLAFVNGRCLLNVNARIGGSPRGVPEQSDEERLSSLFWNDSVIAALQDLATRTGAKFEGQPEASAKQVDAKREDEEAVSVLVSAPVRFYVRRYLQRRTPSTFWSLLEPVLGGAYPIDDEWVLADVNVKK 850
            + PLPEDPL+IDEHA  RPYDSMMFNFKVS+VDGGNLLKWYGG YGGMA K++GLVSGEGVLAGHAKDANCRVVWKS+  PPEV LNPE  K    ++ L + +   +   +     S   Q+A+A   V P+ +R + S V   +SG LGGG +RGLVY+KLGDP EARRVK+RTIV  FD RRAGW+DD+LQ ILRH+PLL  +ADTYFKG+MFQ+PILPPG T MPRTPRMELLG DGALAVR LSLND  FPEIMTGSFSFS SDFSLSLK+R  +  +A E+K+    SN      +  +ELT+SAS+KGNA +  R  S EA A +SKN   D++A V  KNL +H  +GS ++   G+ VRGT+D++M +++ +R G+G I IR+PSLG L  +++GG+VLWRDQNVFLRKG++KYRRSEYR++A Y LP  +GS F W++NVNV KANV+DIAQL+LSGNAVA AMQ+P++S    R+ HPNGP WI+RLS S +   E   E W+VPT++PF+EQV YY +++ E    PK + RK+ + R R A   L+D+ GDVTGIIS+KYDSRLGE ++  S    LLQA LDQL+R SFSFRL G DWM+GDIPID V+  GSFEEGVLDIG  L Q++++FGAEV CR+T +GS+ A+A++DN PA L+NRY+QAPV I G CSGR QVEGNITNPRALGR+VWTNASLNGK VRGA+TD+A VNGRCLLNVNARIGGS     E+SDEERL+SLFWNDSV+AALQDLATRT +KFE    +SA+     RE  EAVSV VSAPVRFYVRRYLQ RTP  FWS+LEPVLGGAYPIDDEW+LADV V+K
Sbjct:  645 IAPLPEDPLEIDEHAPMRPYDSMMFNFKVSNVDGGNLLKWYGGQYGGMAVKSIGLVSGEGVLAGHAKDANCRVVWKSSGAPPEVLLNPEQRKFGYESTPLASRSQPVEPQNEVAGRVSNEVQSAEA---VTPSGDRTKGSNVANAESGLLGGGDFRGLVYLKLGDPPEARRVKLRTIVKGFDGRRAGWADDKLQSILRHSPLLGLSADTYFKGLMFQKPILPPGTTKMPRTPRMELLGADGALAVRNLSLNDTVFPEIMTGSFSFSASDFSLSLKDRIVQ--RALEAKDANMQSNKTPVVEKKPNELTISASIKGNADMHFRNSSAEARASLSKNGNNDLIATVRGKNLVLHELMGSNNDSIRGDTVRGTMDLSMDLDMTTRNGKGTIRIRDPSLGGLKLSAIGGQVLWRDQNVFLRKGTVKYRRSEYRISARYGLPSAEGSAFDWDVNVNVHKANVKDIAQLILSGNAVASAMQTPLSSDGIGRVIHPNGPEWIRRLSLSTDPEIEDLSEVWEVPTNIPFSEQVVYYHQLLAEELEFPKRRSRKRSHPRPRKAAPRLSDVHGDVTGIISIKYDSRLGEENAGASTGSALLQAVLDQLSRASFSFRLTGTDWMVGDIPIDKVEASGSFEEGVLDIGPLLLQSRQEFGAEVQCRVTRSGSVSAAAIVDNAPAALVNRYMQAPVSIAGNCSGRFQVEGNITNPRALGRVVWTNASLNGKHVRGARTDMACVNGRCLLNVNARIGGSSGNAREESDEERLNSLFWNDSVVAALQDLATRTPSKFETSASSSAQGGKRDRERGEAVSVRVSAPVRFYVRRYLQPRTPGAFWSVLEPVLGGAYPIDDEWILADVRVRK 1492          
The following BLAST results are available for this feature:
BLAST of Gcaud2325.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IPB0_9FLOR0.000e+063.66Pre-B-cell leukemia transcription factor 3 n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..147
NoneNo IPR availablePANTHERPTHR34457EMBRYO DEFECTIVE 2410coord: 165..730

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_3311_length_3658_cov_4.022989contigNODE_3311_length_3658_cov_4.022989:2..2552 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2325.t1Gcaud2325.t1Gracilaria caudata M_176_S67 malemRNANODE_3311_length_3658_cov_4.022989 2..2552 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2325.t1 ID=Gcaud2325.t1|Name=Gcaud2325.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=851bp
XLPPLPEDPLDIDEHAAFRPYDSMMFNFKVSDVDGGNLLKWYGGVYGGMA
TKAVGLVSGEGVLAGHAKDANCRVVWKSTTPPPEVFLNPETPKSASSASA
LVAATSSKDAYKDRQKGNSGSGQAAKADEGVAPASNRDQRSPVPQSGFLG
GGKYRGLVYIKLGDPLEARRVKVRTIVNEFDARRAGWSDDQLQDILRHTP
LLEAAADTYFKGVMFQRPILPPGATTMPRTPRMELLGVDGALAVRKLSLN
DVAFPEIMTGSFSFSVSDFSLSLKERDAKTGKASESKNGTQLSNGEAHRS
IDELTLSASLKGNAFLRLRLGSTEADADISKNEQGDIVAMVSSKNLDIHS
FVGSGSEFFSGEAVRGTIDMNMGVNLNSRTGRGRIHIRNPSLGRLAFTSV
GGEVLWRDQNVFLRKGSLKYRRSEYRVNAGYELPLEQGSDFKWNMNVNVQ
KANVRDIAQLVLSGNAVARAMQSPVNSAEQSRITHPNGPLWIQRLSQSHE
SGFETSVESWKVPTDVPFAEQVAYYRRMMKELDAPPKPKVRKKRYIRTRD
APLTLADLRGDVTGIISMKYDSRLGEISSSPSPAGVLLQAALDQLTRTSF
SFRLVGADWMIGDIPIDNVQTLGSFEEGVLDIGTTLFQNQEQFGAEVDCR
LTSAGSLQASAMLDNVPAGLMNRYVQAPVDIDGTCSGRLQVEGNITNPRA
LGRMVWTNASLNGKQVRGAKTDLAFVNGRCLLNVNARIGGSPRGVPEQSD
EERLSSLFWNDSVIAALQDLATRTGAKFEGQPEASAKQVDAKREDEEAVS
VLVSAPVRFYVRRYLQRRTPSTFWSLLEPVLGGAYPIDDEWVLADVNVKK
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