Gcaud7901.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7901.t1
Unique NameGcaud7901.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length147
Homology
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BLAST of Gcaud7901.t1 vs. uniprot
Match: A0A2V3IHK6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHK6_9FLOR)

HSP 1 Score: 103 bits (257), Expect = 1.600e-25
Identity = 64/145 (44.14%), Postives = 80/145 (55.17%), Query Frame = 0 
Query:    1 MFRACKPSVPRASPAKAHPLNC----PPTAVQPAAQPLQCFNTPHKTPXXXXXXDEQQHVKQDLFPPVTTAKEDEQPDASPQHDGTQSDMEVAGLEEGWEFRTVLEPALTPEAISEDLNREIRSERRIHPVDDPLLEDMFAFFSQ 141
            MFRACKPS+PRASP K HP       PP AVQPAA+P   F TP K         + Q      F     A+E +     P      S   +  LE GWE++TV +PALT E + EDL RE+R ER+I P +DPLL+ MF+ F +
Sbjct:    1 MFRACKPSLPRASPDKTHPHRTAAPDPPAAVQPAAEPPYVFRTPTKDDSGDTAESQNQKSHAQSF-----AREPQPLTMPPPPSEVCSQPYICTLEPGWEYKTVRQPALTQEDVLEDLTREVRPERQISPDNDPLLDLMFSMFPE 140
The following BLAST results are available for this feature:
BLAST of Gcaud7901.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IHK6_9FLOR1.600e-2544.14Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_323_length_30158_cov_4.260851contigNODE_323_length_30158_cov_4.260851:3119..3559 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7901.t1Gcaud7901.t1Gracilaria caudata M_176_S67 malemRNANODE_323_length_30158_cov_4.260851 3119..3559 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7901.t1 ID=Gcaud7901.t1|Name=Gcaud7901.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=147bp
MFRACKPSVPRASPAKAHPLNCPPTAVQPAAQPLQCFNTPHKTPPPPPPL
DEQQHVKQDLFPPVTTAKEDEQPDASPQHDGTQSDMEVAGLEEGWEFRTV
LEPALTPEAISEDLNREIRSERRIHPVDDPLLEDMFAFFSQAHPKQ*
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