Gcaud7904.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7904.t1
Unique NameGcaud7904.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length134
Homology
BLAST of Gcaud7904.t1 vs. uniprot
Match: A0A2V3IHN5_9FLOR (60S ribosomal protein L32-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHN5_9FLOR)

HSP 1 Score: 231 bits (590), Expect = 7.820e-76
Identity = 117/133 (87.97%), Postives = 125/133 (93.98%), Query Frame = 0
Query:    1 MAKSLNTLKLVKKRTRKFKRHQSDTKIRVPESWRRPKGIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIRVTNPSAKVNVEETE 133
            MA SLNT+KLVKKRTRKFKRHQ DTKIRV ESWRRPKGIDSRVRRKWRGKVSMPNIGYG+NKKTRHMLPNGF+KFVVHNV+ELE+LMM NRV+CAEI  AVSARKRIAILDRAAQLDIRVTN +A+V VEETE
Sbjct:   48 MATSLNTIKLVKKRTRKFKRHQCDTKIRVAESWRRPKGIDSRVRRKWRGKVSMPNIGYGTNKKTRHMLPNGFFKFVVHNVSELEVLMMHNRVFCAEIGHAVSARKRIAILDRAAQLDIRVTNSNARVKVEETE 180          
BLAST of Gcaud7904.t1 vs. uniprot
Match: Q7XY96_GRIJA (Ribosome protein L32 n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XY96_GRIJA)

HSP 1 Score: 203 bits (516), Expect = 3.110e-65
Identity = 99/125 (79.20%), Postives = 112/125 (89.60%), Query Frame = 0
Query:    9 KLVKKRTRKFKRHQSDTKIRVPESWRRPKGIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIRVTNPSAKVNVEETE 133
            K+VKKRT+KFKRHQSDT IRV ESWRRPKGIDSRVRRKWRGKV MPNIGYGSNKKTRH+LPNGFYK ++ NV+EL++LMM NR YC EIA +VS+RKRIAILDRAAQ D++VTN  AKV VEET+
Sbjct:    9 KIVKKRTKKFKRHQSDTAIRVSESWRRPKGIDSRVRRKWRGKVLMPNIGYGSNKKTRHLLPNGFYKMLISNVDELDVLMMHNRTYCVEIAHSVSSRKRIAILDRAAQFDLKVTNAGAKVKVEETQ 133          
BLAST of Gcaud7904.t1 vs. uniprot
Match: A0A6T6MH63_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6MH63_9RHOD)

HSP 1 Score: 182 bits (463), Expect = 3.690e-57
Identity = 93/133 (69.92%), Postives = 110/133 (82.71%), Query Frame = 0
Query:    1 MAKSLNTLKLVKKRTRKFKRHQSDTKIRVPESWRRPKGIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIRVTNPSAKVNVEETE 133
            MA  L   K+VKKRT+KFKRH +D  +RV ESWRRPKGIDS VRRK+RGKV MPNIGYGSNKKTRH++PNGFYKFVV+NV EL+LL+M NR Y AEIA  VS++KR  I+ RAA+LD++VTN  A+V VEETE
Sbjct:    1 MAIPLEKPKIVKKRTKKFKRHHTDRYLRVKESWRRPKGIDSCVRRKFRGKVLMPNIGYGSNKKTRHLMPNGFYKFVVNNVKELDLLLMHNRTYAAEIAHNVSSKKRKEIIARAAELDVKVTNSKARVRVEETE 133          
BLAST of Gcaud7904.t1 vs. uniprot
Match: M4C135_HYAAE (Uncharacterized protein n=11 Tax=Oomycota TaxID=4762 RepID=M4C135_HYAAE)

HSP 1 Score: 181 bits (459), Expect = 3.680e-56
Identity = 89/125 (71.20%), Postives = 104/125 (83.20%), Query Frame = 0
Query:    9 KLVKKRTRKFKRHQSDTKIRVPESWRRPKGIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIRVTNPSAKVNVEETE 133
            K+VKKR  KFKRHQS+   RVPESWRRPKGID RVRRK++G + MPN+GYGSNKKTRH+LPNGFYKFVV+NV ELE+L+M NR YCAEIA  VS RKR  I++RA QL++RVTNP A+V  EE E
Sbjct:   11 KIVKKRVTKFKRHQSNRFKRVPESWRRPKGIDGRVRRKFKGAIKMPNVGYGSNKKTRHLLPNGFYKFVVNNVAELEVLLMHNRKYCAEIAHNVSGRKRREIIERAEQLNVRVTNPDARVRAEENE 135          
BLAST of Gcaud7904.t1 vs. uniprot
Match: V4TB21_CITCL (Uncharacterized protein n=3 Tax=Citrus TaxID=2706 RepID=V4TB21_CITCL)

HSP 1 Score: 177 bits (450), Expect = 1.220e-54
Identity = 94/133 (70.68%), Postives = 107/133 (80.45%), Query Frame = 0
Query:    1 MAKSLNTLKLVKKRTRKFKRHQSDTKIRVPESWRRPKGIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIRVTNPSAKVNVEETE 133
            MA  L T K+VKKR +KFKR QSD KI V E+WRRPKGIDSRVRRK++G V MPNIGYGS+KKTRH LPNGF KFVVHNVNELELLMM NR YCAEIA  VS +KR  I++RAAQLD+ VTN  A++  +E E
Sbjct:   40 MAVPLLTKKIVKKRLKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLRSQEEE 172          
BLAST of Gcaud7904.t1 vs. uniprot
Match: A0A1Q3BSL4_CEPFO (Ribosomal_L32e domain-containing protein n=3 Tax=Mesangiospermae TaxID=1437183 RepID=A0A1Q3BSL4_CEPFO)

HSP 1 Score: 176 bits (445), Expect = 2.030e-54
Identity = 93/133 (69.92%), Postives = 105/133 (78.95%), Query Frame = 0
Query:    1 MAKSLNTLKLVKKRTRKFKRHQSDTKIRVPESWRRPKGIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIRVTNPSAKVNVEETE 133
            MA  L T K+VKKR +KFKR QSD KI V ESWRRPKGIDSRVRRK++G   MPNIGYGS+KKTRH LPNGF KFVVHNV ELELLMM NR YCAEIA  +S RKR  I++RAAQLD+ VTN  A++  +E E
Sbjct:    1 MAVPLLTKKIVKKRVKKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHNISTRKRKDIVERAAQLDVVVTNKLARLRSQEDE 133          
BLAST of Gcaud7904.t1 vs. uniprot
Match: A0A1S3B8Z6_CUCME (60S ribosomal protein L32-1 n=91 Tax=Mesangiospermae TaxID=1437183 RepID=A0A1S3B8Z6_CUCME)

HSP 1 Score: 176 bits (445), Expect = 2.030e-54
Identity = 92/133 (69.17%), Postives = 107/133 (80.45%), Query Frame = 0
Query:    1 MAKSLNTLKLVKKRTRKFKRHQSDTKIRVPESWRRPKGIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIRVTNPSAKVNVEETE 133
            MA  L + K+VKKRT+KFKR QSD KI V E+WRRPKGIDSRVRRK++G   MPNIGYG++KKTRH LPNGF KFVVHNVNELELLMM NR YCAEIA  VS +KR  I++RAAQLD+ VTN  A++  +E E
Sbjct:    1 MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE 133          
BLAST of Gcaud7904.t1 vs. uniprot
Match: A0A4P9XXJ7_9FUNG (60S ribosomal protein L32 n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XXJ7_9FUNG)

HSP 1 Score: 175 bits (444), Expect = 2.980e-54
Identity = 86/128 (67.19%), Postives = 108/128 (84.38%), Query Frame = 0
Query:    4 SLNTLKLVKKRTRKFKRHQSDTKIRVPESWRRPKGIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIRVTNPSAKVNVEE 131
            SLN   +VKKRT++F RHQSD  +RV  SWR+PKGID+RVRR+++G+++MPNIGYGSNKKTRH++PNGF KF+V NV EL+LLMMQNR Y AEIA  VS+RKRI I++RAAQL+I+VTN  A+V  EE
Sbjct:    6 SLNRTPIVKKRTKRFARHQSDRFLRVDASWRKPKGIDNRVRRRFKGQIAMPNIGYGSNKKTRHLMPNGFKKFLVSNVKELDLLMMQNRTYAAEIAHNVSSRKRIQIVERAAQLNIKVTNAKARVRTEE 133          
BLAST of Gcaud7904.t1 vs. uniprot
Match: A0A061RH85_9CHLO (Large subunit ribosomal protein L32e n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RH85_9CHLO)

HSP 1 Score: 174 bits (442), Expect = 6.010e-54
Identity = 91/134 (67.91%), Postives = 108/134 (80.60%), Query Frame = 0
Query:    1 MAKSLNTLKLVKKRTRKFKRHQSDTKIRVPESWRRPKGIDSRVRRKWRG-KVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIRVTNPSAKVNVEETE 133
            M + L  + +VKKRT+KF RHQSD KI V ESWRRPKGIDSRVRRK+RG  V MPNIGYG+NKKTRH+LPNGFYKF+VHNV +LE+LMM NR YCAEIA  VS  KR AI++RA QL++RV N SA++  +E E
Sbjct:    1 MVQPLKRIPIVKKRTKKFARHQSDRKIAVKESWRRPKGIDSRVRRKFRGCGVIMPNIGYGTNKKTRHLLPNGFYKFLVHNVADLEMLMMHNRNYCAEIAHNVSTLKRKAIVERAHQLNVRVINASARLRSQEDE 134          
BLAST of Gcaud7904.t1 vs. uniprot
Match: A0A5J5BL49_9ASTE (Uncharacterized protein n=6 Tax=Pentapetalae TaxID=1437201 RepID=A0A5J5BL49_9ASTE)

HSP 1 Score: 175 bits (444), Expect = 7.500e-54
Identity = 93/133 (69.92%), Postives = 106/133 (79.70%), Query Frame = 0
Query:    1 MAKSLNTLKLVKKRTRKFKRHQSDTKIRVPESWRRPKGIDSRVRRKWRGKVSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASAVSARKRIAILDRAAQLDIRVTNPSAKVNVEETE 133
            MA  L T K+VKKR +KFKR QSD KI V E+WRRPKGIDSRVRRK++G V MPNIGYGS+KKTRH LPNGF KFVVHNV ELE+LMM NR YCAEIA  VS RKR  I++RAAQLD+ VTN  A++  +E E
Sbjct:   31 MAVPLLTKKIVKKRVKKFKRTQSDWKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHNVSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE 163          
The following BLAST results are available for this feature:
BLAST of Gcaud7904.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHN5_9FLOR7.820e-7687.9760S ribosomal protein L32-1 n=1 Tax=Gracilariopsis... [more]
Q7XY96_GRIJA3.110e-6579.20Ribosome protein L32 n=1 Tax=Griffithsia japonica ... [more]
A0A6T6MH63_9RHOD3.690e-5769.92Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M4C135_HYAAE3.680e-5671.20Uncharacterized protein n=11 Tax=Oomycota TaxID=47... [more]
V4TB21_CITCL1.220e-5470.68Uncharacterized protein n=3 Tax=Citrus TaxID=2706 ... [more]
A0A1Q3BSL4_CEPFO2.030e-5469.92Ribosomal_L32e domain-containing protein n=3 Tax=M... [more]
A0A1S3B8Z6_CUCME2.030e-5469.1760S ribosomal protein L32-1 n=91 Tax=Mesangiosperm... [more]
A0A4P9XXJ7_9FUNG2.980e-5467.1960S ribosomal protein L32 n=1 Tax=Thamnocephalis s... [more]
A0A061RH85_9CHLO6.010e-5467.91Large subunit ribosomal protein L32e n=2 Tax=Tetra... [more]
A0A5J5BL49_9ASTE7.500e-5469.92Uncharacterized protein n=6 Tax=Pentapetalae TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001515Ribosomal protein L32eSMARTSM01393Ribosomal_L32e_2coord: 15..122
e-value: 1.2E-71
score: 254.0
IPR001515Ribosomal protein L32ePFAMPF01655Ribosomal_L32ecoord: 15..122
e-value: 2.5E-49
score: 166.1
IPR001515Ribosomal protein L32ePANTHERPTHR2341360S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT Ncoord: 1..132
IPR001515Ribosomal protein L32eCDDcd00513Ribosomal_L32_L32ecoord: 17..122
e-value: 2.3865E-61
score: 181.574
IPR036351Ribosomal protein L32e superfamilySUPERFAMILY52042Ribosomal protein L32ecoord: 3..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_323_length_30158_cov_4.260851contigNODE_323_length_30158_cov_4.260851:12034..12435 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7904.t1Gcaud7904.t1Gracilaria caudata M_176_S67 malemRNANODE_323_length_30158_cov_4.260851 12034..12435 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7904.t1 ID=Gcaud7904.t1|Name=Gcaud7904.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=134bp
MAKSLNTLKLVKKRTRKFKRHQSDTKIRVPESWRRPKGIDSRVRRKWRGK
VSMPNIGYGSNKKTRHMLPNGFYKFVVHNVNELELLMMQNRVYCAEIASA
VSARKRIAILDRAAQLDIRVTNPSAKVNVEETE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001515Ribosomal_L32e
IPR036351Ribosomal_L32e_sf