Gcaud7621.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud7621.t1
Unique Name	Gcaud7621.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	389

Homology

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BLAST of Gcaud7621.t1 vs. uniprot
Match: A0A2V3J175_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J175_9FLOR)

HSP 1 Score: 397 bits (1019), Expect = 5.180e-134
Identity = 193/248 (77.82%), Postives = 214/248 (86.29%), Query Frame = 0

Query:   17 ITSSVSLFYAGSRPALDVERLESRLRLIEQYARAGADVPPXXXXXXXXXAGGSSFQRRLVFYNRPPKTGSTIVRIAVKRALDDQQLKAAKCFNMIEWNEMGLKTIISRRDVDFYGCHTRMTKDRYDFVSRMHGGNVTFITNTREPENIILSAYLQENRNRKVADITDEKEMQEEIERYKEHLERYPVDALYRYHGADVPLITCPAEWVHEDAMRRLAERYEVLIDLSRPEESTTMMEAVTGLRPDFTG 264
            + S+VSLFY+ SRPALDVERLESRLRLIEQYARAGADVPP             S Q+RL+FYNRPPKTGST VRIAVKRALD+++++AAKCFNMIEWNEMGLKTII RRDVDFYGCHTR+T +RYDFVSR+ GGNVTF+TNTREP NI+LSAYLQ NR+R VADITD  EM +EIERYK+H+E YPVDALYRYHGA VPL  CP EWVHEDAMR +AERYEV+IDLSRPEEST MME VTGLRPDFTG
Sbjct:   21 VASTVSLFYSLSRPALDVERLESRLRLIEQYARAGADVPPPPAPIVTTVPSAHSSQKRLIFYNRPPKTGSTTVRIAVKRALDEREMRAAKCFNMIEWNEMGLKTIIHRRDVDFYGCHTRLTTERYDFVSRLRGGNVTFVTNTREPSNIVLSAYLQANRDRNVADITDPAEMDKEIERYKQHVESYPVDALYRYHGASVPLTKCPHEWVHEDAMRAIAERYEVVIDLSRPEESTAMMETVTGLRPDFTG 268

[Close]

BLAST of Gcaud7621.t1 vs. uniprot
Match: A0A2V3IZP3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZP3_9FLOR)

HSP 1 Score: 260 bits (664), Expect = 1.460e-80
Identity = 126/196 (64.29%), Postives = 159/196 (81.12%), Query Frame = 0

Query:   69 SSFQRRLVFYNRPPKTGSTIVRIAVKRALDDQQLKAAKCFNMIEWNEMGLKTIISRRDVDFYGCHTRMTKDRYDFVSRMHGGNVTFITNTREPENIILSAYLQENRNRKVADITDEKEMQEEIERYKEHLERYPVDALYRYHGA-DV-PLITCPAEWVHEDAMRRLAERYEVLIDLSRPEESTTMMEAVTGLRPDF 262
            S   +RL+FYNRPPKTGST VRIA+K AL+   + AAKCFNMIEWNEM L+TII+RR+VDFYGCHTR+  DR+  +S+M GGNVTF+T+TRE  +I+LSAYLQ+ R+R+VADIT +KEM EEI RYK+ +E+YPVDALY YHGA D+  L +CP  W H  AMRR+AERYE+++DL + +ES  M+EAVTGL+PD 
Sbjct:   65 SPHTKRLLFYNRPPKTGSTSVRIAMKNALNKDNMVAAKCFNMIEWNEMALRTIINRRNVDFYGCHTRLVPDRFRDISQMRGGNVTFMTSTREASDIVLSAYLQDQRDRRVADITGKKEMDEEIARYKKFVEKYPVDALYAYHGAGDIHKLSSCPVSWQHTLAMRRIAERYEIVVDLEKADESAVMVEAVTGLKPDL 260

The following BLAST results are available for this feature:

BLAST of Gcaud7621.t1 vs. uniprot

BLAST of Gcaud7621.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3J175_9FLOR	5.180e-134	77.82	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3IZP3_9FLOR	1.460e-80	64.29	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 71..271 e-value: 5.4E-8 score: 34.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 71..202

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_3121_length_4000_cov_4.627526	contig	NODE_3121_length_4000_cov_4.627526:200..1404 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud7621.t1	Gcaud7621.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_3121_length_4000_cov_4.627526 200..1404 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud7621.t1 ID=Gcaud7621.t1|Name=Gcaud7621.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=389bp
EGTADARADRTGRNIFITSSVSLFYAGSRPALDVERLESRLRLIEQYARA
GADVPPPPAPVVTAVAGGSSFQRRLVFYNRPPKTGSTIVRIAVKRALDDQ
QLKAAKCFNMIEWNEMGLKTIISRRDVDFYGCHTRMTKDRYDFVSRMHGG
NVTFITNTREPENIILSAYLQENRNRKVADITDEKEMQEEIERYKEHLER
YPVDALYRYHGADVPLITCPAEWVHEDAMRRLAERYEVLIDLSRPEESTT
MMEAVTGLRPDFTGVTRGSAPPRGSAGPKVVAAQRGCVARGSAPPRGSGT
TTGMGIARAISMGGRGMGTGSVSVTAAKASRGVATTTGGILRRDEAGQGL
FVSPSLADVPQVVAPPVAASGAAPVASMGSVRAGRGGK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase