Gcaud997.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud997.t1
Unique NameGcaud997.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length176
Homology
BLAST of Gcaud997.t1 vs. uniprot
Match: A0A2V3IK79_9FLOR (Malectin domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK79_9FLOR)

HSP 1 Score: 236 bits (603), Expect = 3.830e-77
Identity = 115/173 (66.47%), Postives = 139/173 (80.35%), Query Frame = 0
Query:    1 MKIAGFLSLFLAVVSTVQSQTLLLNVGGPDLPDIGFVADPTSNLLSSASATVSLPANTVPLNSSWAPIYSSYRYAFGGNLAYRFALDDGTYSVSLAFAETYAPTFFAGARQFDVVINGVVHFARLDVFATVGANRALYLNVRDVRVVGGSLSVQMRRIEGRQNPFLSAMVVRP 173
            MK++  + +F A V  V+ Q LLLNVGGPDLP   F  DPT+NLLSSASA+V+LP+NTVPLNSSW PIYS+YRYAFGGN+AYRF +  G YSV++AFAETY P FF GARQFDVVIN VV+F RLDVFATVGAN  LYL V D+ +  G L++ M+R+EGRQNP LSA+V++P
Sbjct:    1 MKLSSQVLVFFAFVLAVRCQNLLLNVGGPDLPVANFARDPTANLLSSASASVALPSNTVPLNSSWGPIYSTYRYAFGGNIAYRFNVSKGNYSVAMAFAETYLPAFFVGARQFDVVINEVVYFKRLDVFATVGANSPLYLRVDDIAIADGQLTIVMQRVEGRQNPLLSALVIKP 173          
BLAST of Gcaud997.t1 vs. uniprot
Match: A0A2V3IIF4_9FLOR (Malectin domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIF4_9FLOR)

HSP 1 Score: 179 bits (454), Expect = 2.270e-54
Identity = 87/165 (52.73%), Postives = 113/165 (68.48%), Query Frame = 0
Query:    9 LFLAVVSTVQSQTLLLNVGGPDLPDIGFVADPTSNLLSSASATVSLPANTVPLNSSWAPIYSSYRYAFGGNLAYRFALDDGTYSVSLAFAETYAPTFFAGARQFDVVINGVVHFARLDVFATVGANRALYLNVRDVRVVGGSLSVQMRRIEGRQNPFLSAMVVRP 173
            +F  ++ T  +Q L  N+GGP    I F  DP  NLLS  +A +SLP +TVPLNSSW PIY +YRYA GGN+ YR  +  G YSV++ FAETY P F AG RQFD++INGV  F RLDVFATVGAN  +YL   ++    G++++ +RRI  R+NP LSA+V+ P
Sbjct:   12 IFFFILLTAVAQPLRFNIGGPSFEAINFAEDPQLNLLSPNTAIISLPPSTVPLNSSWQPIYDTYRYALGGNIGYRIPVAPGMYSVAVGFAETYPPNFQAGKRQFDLLINGVPRFNRLDVFATVGANSPMYLRTDNIPDRNGTITIVVRRISSRENPMLSALVILP 176          
BLAST of Gcaud997.t1 vs. uniprot
Match: UPI001E509379 (malectin domain-containing carbohydrate-binding protein n=1 Tax=Haladaptatus sp. DYF46 TaxID=2886041 RepID=UPI001E509379)

HSP 1 Score: 69.7 bits (169), Expect = 9.730e-11
Identity = 48/137 (35.04%), Postives = 73/137 (53.28%), Query Frame = 0
Query:   46 SSASATVSLPANTVPLNSSWAPI-YSSYRYAFGGNLAYRFALDDGTYSVSLAFAETYAPTFFAGA--------RQFDVVINGVVHFARLDVFATVGANRALYLNVRDVRVVGGSLSVQMRRIEGRQNPFLSAMVVRP 173
            SS  A V    ++ P+  +   + Y S +Y  GGNL+Y  ++++GTY V+L FAE Y    F G+        R FDV + G   F++LD++A VG + A    V+DV V  G+LS+  +     +N   S  V+RP
Sbjct:  379 SSNGAVVETGVSSDPIEGTEHDLLYQSEQY--GGNLSYDVSIENGTYDVTLQFAEFYFGGDFNGSPTGGGEESRVFDVSVQGDQVFSKLDIYARVGHDAAFTKTVQDVEVTDGNLSITTKTYA--ENSKFSGFVIRP 511          
BLAST of Gcaud997.t1 vs. uniprot
Match: A0A858RKQ0_9BACT (Uncharacterized protein n=1 Tax=Luteolibacter luteus TaxID=2728835 RepID=A0A858RKQ0_9BACT)

HSP 1 Score: 66.2 bits (160), Expect = 1.810e-9
Identity = 39/99 (39.39%), Postives = 54/99 (54.55%), Query Frame = 0
Query:   77 GGNLAYRFALDDGTYSVSLAFAETYAPTFFAGARQFDVVINGVVHFARLDVFATVGANRALYLNVRDVRVVGGSLSVQMRRIEGRQNPFLSAMVVRPLA 175
            G  L Y+  + +G Y V L FAE +   +  G R FDV++ G +    LDVFA VGANRAL +    V V  G L++    +   QNP LS + + P+A
Sbjct: 1879 GAELKYQLTVPNGDYEVRLHFAEVWPGAYATGIRVFDVLMEGALAINDLDVFARVGANRALVI-ATPVTVADGKLTIDFVHVI--QNPNLSGIEIYPIA 1974          
BLAST of Gcaud997.t1 vs. uniprot
Match: A0A7C4QC66_9BACT (Malectin domain-containing protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C4QC66_9BACT)

HSP 1 Score: 64.7 bits (156), Expect = 5.900e-9
Identity = 42/94 (44.68%), Postives = 54/94 (57.45%), Query Frame = 0
Query:   62 NSSWAPIYSSYRYAFGGNLAYRFALDDGTYSVSLAFAETYAPTFFAGARQFDVVINGVVHFARLDVFATVGANRALYLNVRDVRVVGGSLSVQM 155
            N++   +Y + RY   GN  YRF + +GTY V+L FAETY  +  AGAR F V I GV     LD++A VGAN A Y     V V  G L++ M
Sbjct:  748 NTTDDTLYQTERY---GNPTYRFDIPNGTYEVTLKFAETYWTS--AGARIFSVSIEGVTVINNLDIYAQVGANYA-YDRTFVVEVTDGQLTITM 835          
BLAST of Gcaud997.t1 vs. uniprot
Match: U5QK72_9CYAN (Malectin domain-containing protein n=1 Tax=Gloeobacter kilaueensis JS1 TaxID=1183438 RepID=U5QK72_9CYAN)

HSP 1 Score: 62.0 bits (149), Expect = 4.410e-8
Identity = 38/98 (38.78%), Postives = 56/98 (57.14%), Query Frame = 0
Query:   57 NTVPLNSSWAP-IYSSYRYAFGGNLAYRFALDDGTYSVSLAFAETYAPTFFAGARQFDVVINGVVHFARLDVFATVGANRALYLNVRDVRVVGGSLSV 153
            N VP+ ++  P +Y + RY  G + +Y   L DGTY++SL FAETY      G R+F+V   G    +  D+ A  GAN A+  +   V+V GGSL++
Sbjct:   65 NAVPIANTANPYLYQTERY--GSSFSYNVPLPDGTYTLSLKFAETYFTQ--PGQRKFNVTAEGQTLLSNFDILAAAGANTAITKSFT-VKVTGGSLNI 157          
BLAST of Gcaud997.t1 vs. uniprot
Match: A0A0W1R8P9_9EURY (PKD domain-containing protein n=1 Tax=Haloprofundus marisrubri TaxID=1514971 RepID=A0A0W1R8P9_9EURY)

HSP 1 Score: 61.2 bits (147), Expect = 8.220e-8
Identity = 45/108 (41.67%), Postives = 57/108 (52.78%), Query Frame = 0
Query:   68 IYSSYRYAFGGNLAYRFALDDGTYSVSLAFAETYAPTFFAGARQFDVVINGVVHFARLDVFATVGANRALYLNVRDVRVVGGSLSVQMRRIEGRQNPFLSAMVVRPLA 175
            +Y S RY   G   Y   +DDGTY V+L FAE +      G RQFDV + G    + LDV A VG +RA Y   R V V  G L+V+        N  LSA+VVR ++
Sbjct:  489 LYRSERY---GEFGYDVPVDDGTYEVTLQFAEIFHTG--DGDRQFDVALEGTEVVSNLDVHAEVGHDRA-YEVTRTVTVTDGELNVEFDT--DVDNAKLSALVVREVS 588          
BLAST of Gcaud997.t1 vs. uniprot
Match: UPI001CF25C18 (malectin n=1 Tax=Hymenobacter terricola TaxID=2819236 RepID=UPI001CF25C18)

HSP 1 Score: 60.5 bits (145), Expect = 9.600e-8
Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = 0
Query:   56 ANTVPL-NSSWAPIYSSYRYAFGGNLAYRFALDDGTYSVSLAFAETYAPTFFAGARQFDVVINGVVHFARLDVFATVGANRALYLNVRDVRVVGGSLSVQM--RRIEGRQNPFLSAMVV 171
            A T P+  ++   +Y + RY   G ++Y  A+ +GTY+V+L FAE Y     AG R FDV + G    +R D+F   GA  A       V V  G+L++ +  R   G  NP LSA+ V
Sbjct:   95 ATTAPIAGTTDDALYQTERYGTNGAMSYALAVPNGTYTVTLHFAELYWTA--AGQRVFDVSLEGTPVLSRYDIFRKAGALTAT-TETFTVTVADGALNLALTSRNTGGVDNPKLSALEV 210          
BLAST of Gcaud997.t1 vs. uniprot
Match: A0A1D2IK45_9ACTN (Endo-1,4-beta-xylanase A n=4 Tax=Streptomyces TaxID=1883 RepID=A0A1D2IK45_9ACTN)

HSP 1 Score: 60.8 bits (146), Expect = 1.180e-7
Identity = 39/107 (36.45%), Postives = 61/107 (57.01%), Query Frame = 0
Query:   68 IYSSYRYAFGGNLAYRFALDDGTYSVSLAFAETYAPTFFAGARQFDVVINGVVHFARLDVFATVGANRALYLNVRDVRVVGGSLSVQMRRIEGRQNPFLSAMVVRPL 174
            ++ S RY   G+  Y   +D+G Y+V+L FAE Y     AGAR FDV++ G    + LD++A  G+N A Y    DV V  G+L++Q   +   +N  ++A+ V P+
Sbjct:  207 LFQSERY---GDFTYAAPVDNGHYAVTLYFAEVYHTA--AGARSFDVLMEGEEQISDLDIYAEAGSNTA-YATRTDVTVGDGTLNLQF--VSNVENAKVNAIKVTPV 305          
BLAST of Gcaud997.t1 vs. uniprot
Match: A0A7Y3DK30_9ACTN (Choice-of-anchor D domain-containing protein (Fragment) n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y3DK30_9ACTN)

HSP 1 Score: 60.8 bits (146), Expect = 1.190e-7
Identity = 55/164 (33.54%), Postives = 76/164 (46.34%), Query Frame = 0
Query:   13 VVSTVQSQTLLLNVGGPDLPDIGFVA--DPTSNLLSSASATVSLPANTVPLNSSWAPIYSSYRYAFGGNLAYRFALDDGTYSVSLAFAETYAPTFFAGARQFDVVINGVVHFARLDVFATVGANRALYLNVRDVRVVGGSLSVQMRRIEGRQNPFLSAMVVRPL 174
            VV  +   +  +N GG  + D G  +   P  N+      +VS P  T P       +Y SYR+   G  A+ FA+  G Y V+L FAET+  +  AGAR FDV I GV      D+FA  G   A  +   DV V  G+L V    I    +P +  + V P+
Sbjct:  193 VVDLIGRSSYRVNAGGDPIDDWGADSPFSPGGNIGPPPDGSVSGP--TAPNE-----VYESYRF---GQQAWDFAVTPGQYRVNLYFAETFVNS--AGARLFDVDIEGVEVLNSFDIFAAAGGKNAGIVRGFDV-VSDGNLDVDFTEIVN--SPAIQGIEVIPM 341          
The following BLAST results are available for this feature:
BLAST of Gcaud997.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A2V3IK79_9FLOR3.830e-7766.47Malectin domain-containing protein n=1 Tax=Gracila... [more]
A0A2V3IIF4_9FLOR2.270e-5452.73Malectin domain-containing protein n=1 Tax=Gracila... [more]
UPI001E5093799.730e-1135.04malectin domain-containing carbohydrate-binding pr... [more]
A0A858RKQ0_9BACT1.810e-939.39Uncharacterized protein n=1 Tax=Luteolibacter lute... [more]
A0A7C4QC66_9BACT5.900e-944.68Malectin domain-containing protein n=1 Tax=bacteri... [more]
U5QK72_9CYAN4.410e-838.78Malectin domain-containing protein n=1 Tax=Gloeoba... [more]
A0A0W1R8P9_9EURY8.220e-841.67PKD domain-containing protein n=1 Tax=Haloprofundu... [more]
UPI001CF25C189.600e-836.13malectin n=1 Tax=Hymenobacter terricola TaxID=2819... [more]
A0A1D2IK45_9ACTN1.180e-736.45Endo-1,4-beta-xylanase A n=4 Tax=Streptomyces TaxI... [more]
A0A7Y3DK30_9ACTN1.190e-733.54Choice-of-anchor D domain-containing protein (Frag... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 174..175
NoneNo IPR availableGENE3D2.60.120.430coord: 18..173
e-value: 5.3E-24
score: 86.9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..175
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
IPR021720Malectin domainPFAMPF11721Malectincoord: 62..159
e-value: 1.4E-16
score: 61.1
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 67..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2982_length_4276_cov_3.347909contigNODE_2982_length_4276_cov_3.347909:1250..1777 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud997.t1Gcaud997.t1Gracilaria caudata M_176_S67 malemRNANODE_2982_length_4276_cov_3.347909 1250..1777 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud997.t1 ID=Gcaud997.t1|Name=Gcaud997.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=176bp
MKIAGFLSLFLAVVSTVQSQTLLLNVGGPDLPDIGFVADPTSNLLSSASA
TVSLPANTVPLNSSWAPIYSSYRYAFGGNLAYRFALDDGTYSVSLAFAET
YAPTFFAGARQFDVVINGVVHFARLDVFATVGANRALYLNVRDVRVVGGS
LSVQMRRIEGRQNPFLSAMVVRPLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021720Malectin_dom
IPR008979Galactose-bd-like_sf