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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 44056.XP_009034106.1 |
| PFAMs | PH,PI3_PI4_kinase |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC00002,RC00078 |
| KEGG ko | ko:K21289 |
| KEGG Reaction | R04545 |
| KEGG Pathway | ko00562,ko04022,ko04072,ko04151,ko04261,ko04371,ko04611,ko04725,ko04921,ko05145,ko05167,map00562,map04022,map04072,map04151,map04261,map04371,map04611,map04725,map04921,map05145,map05167 |
| Evalue | 4.18e-22 |
| EggNOG OGs | COG5032@1|root,KOG0904@2759|Eukaryota |
| EC | 2.7.1.153 |
| Description | 1-phosphatidylinositol-4-phosphate 3-kinase activity |
| COG category | BDLTU |
| BRITE | ko00000,ko00001,ko01000,ko04131 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud1968.t1.stop1 | Gcaud1968.t1.stop1 | Gracilaria caudata M_176_S67 male | stop_codon | NODE_297_length_31759_cov_4.165656 7673..7675 - |
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud1968.t1.intron1 | Gcaud1968.t1.intron1 | Gracilaria caudata M_176_S67 male | intron | NODE_297_length_31759_cov_4.165656 8238..8340 - |
The following start_codon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| Gcaud1968.t1.start1 | Gcaud1968.t1.start1 | Gracilaria caudata M_176_S67 male | start_codon | NODE_297_length_31759_cov_4.165656 10059..10061 - |
Sequences
The following sequences are available for this feature:
mRNA sequence >Gcaud1968.t1 ID=Gcaud1968.t1|Name=Gcaud1968.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=762bp MTQDQQESAGSAPQLVTSSVSQSEDSSENDLRRLNRLSSATMLRTTFNAF ELHPGHLVNLLLAPDLEDNLTHEALLAANNVAIFRLLPLILAAIHRIGES PTHRQNYIKLVSVLRMRVAACRGIKLRFLLLIRNPAFAQQWNVKLVHRRD CYQSARHALDDYAREKSGTPSSSALSQADSASFRLADSKQVAGWLEDKKT LFSFAMRRVLHPEHGIHIRTINWFMRPFRGAFFGTELVDGIMERANFRSR SDAVALAQRMLDHGLIHKVGGHSSKFVDSKKRVYQCRMALQREDAGHCRC KINTNKVITSWCELGQQPIAIKQIEVQLPMDMIDLQSFEFWTSTAYVRDV EKGYRYGYRAITHPLYCGGLNAQVNLDFSKFLSDDTAASDNASSTSFGSS SADFASDLLTPRSVISTMEINDVRQDSSVIGSVVVRKVFSSIARPMIVEL RVPMENADLDEDSDHIILPPGILIKEGDNLMQDLGVEVMFQVFNHIWESS SLIKPKYEKPPYSFCYEVFPTSPTRGFMEAMTGLIPLKDYNWVNWRNRFG SDPERVEDILRSTVGSYIGAYICGGRDRHFDNVLVKDDQYVLHIDFGFLM GTSPPIDGPRIAIAPQMEAVFKELKIWDRFVSMCVDAFLALRAEAPAIIR SFVMMFSKAGYEEAQIRSFVQGKFSLNVHDSEKKAGDLIRRQLVMSSGDI KTKFKAFAHAHIDPAWYGLLEKGFPPAVAIMKLVDAKEQKAARKLSQRPH VVVSEEQKIQL* back to topspliced messenger RNA >Gcaud1968.t1 ID=Gcaud1968.t1|Name=Gcaud1968.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=2286bp|location=Sequence derived from alignment at NODE_297_length_31759_cov_4.165656:7673..10061- (Gracilaria caudata M_176_S67 male)|Notes=Excludes all bases but those of type(s): exon.
ATGACTCAGGACCAGCAAGAGTCGGCGGGCAGTGCCCCCCAGCTTGTCAC TTCTTCCGTGAGTCAGTCGGAGGATTCTTCAGAGAATGACCTTCGTCGTC TTAATCGTTTGTCGTCGGCCACCATGTTGCGGACCACCTTTAATGCATTT GAGCTTCATCCGGGTCACCTGGTAAACCTTTTGTTAGCTCCTGACCTCGA GGACAACCTAACGCACGAGGCCCTTCTTGCCGCCAATAATGTCGCCATTT TCCGTCTGCTACCGCTCATCTTGGCTGCGATACACCGCATTGGCGAGTCA CCCACTCACCGTCAGAACTACATAAAACTGGTGTCTGTTCTGCGCATGCG CGTTGCTGCCTGTCGCGGTATCAAGTTGCGCTTTTTACTGTTGATTCGCA ATCCTGCTTTCGCTCAGCAGTGGAACGTCAAACTCGTTCATCGAAGAGAT TGTTACCAATCTGCCAGACATGCGCTCGATGACTATGCTCGCGAAAAGTC CGGAACCCCCTCGTCGAGCGCTCTCTCACAAGCTGATTCTGCTTCGTTTC GTCTCGCTGACAGCAAGCAAGTCGCTGGCTGGTTAGAGGACAAGAAGACT CTCTTCAGTTTCGCAATGCGACGTGTACTGCATCCCGAACACGGCATTCA CATTCGCACCATCAATTGGTTTATGCGTCCTTTCAGGGGCGCCTTTTTTG GCACTGAACTGGTTGATGGTATTATGGAACGTGCCAATTTCAGGTCTAGA AGTGATGCTGTTGCGCTCGCTCAACGAATGCTGGACCATGGCTTGATACA TAAAGTTGGCGGCCACTCCTCGAAGTTTGTGGATTCGAAGAAGCGAGTAT ACCAATGCCGAATGGCTTTGCAGCGTGAGGATGCTGGTCACTGTCGTTGT AAGATCAATACTAATAAGGTCATTACTTCGTGGTGTGAGCTTGGGCAGCA ACCAATTGCAATCAAACAAATTGAGGTGCAGCTCCCAATGGATATGATTG ATTTGCAGAGCTTCGAGTTCTGGACAAGCACTGCGTATGTTCGCGATGTT GAAAAGGGCTATCGCTATGGATATCGTGCTATCACGCATCCTTTGTACTG CGGCGGTCTTAATGCGCAAGTTAATCTGGACTTCTCCAAATTCTTGTCGG ATGATACTGCTGCGAGTGATAACGCGTCATCAACAAGCTTTGGTTCGTCG TCAGCAGACTTTGCGAGCGACTTGTTGACACCGAGATCAGTGATTTCTAC AATGGAAATCAACGACGTGCGTCAGGACAGTTCGGTCATTGGCTCTGTCG TCGTTCGCAAAGTGTTCTCGAGCATCGCGCGCCCTATGATAGTCGAATTG AGAGTACCCATGGAAAATGCCGATTTAGACGAAGATAGCGACCATATCAT CCTGCCTCCTGGGATTTTGATCAAAGAAGGGGATAATCTTATGCAGGACT TGGGTGTGGAGGTCATGTTTCAAGTATTCAACCACATCTGGGAGTCATCA AGTCTCATTAAACCCAAGTATGAGAAGCCACCGTATAGCTTTTGCTATGA GGTTTTCCCGACATCTCCAACACGGGGATTCATGGAGGCTATGACTGGAC TCATTCCACTGAAGGATTATAACTGGGTGAACTGGAGAAATCGGTTTGGT TCGGACCCCGAGCGAGTTGAAGATATTCTTCGTTCTACAGTCGGATCTTA CATTGGAGCTTATATCTGCGGAGGGAGAGACCGACATTTCGACAATGTCT TGGTTAAAGATGATCAGTATGTTTTACATATTGACTTCGGCTTCCTGATG GGTACCAGTCCACCAATCGATGGACCTCGAATCGCGATTGCGCCACAGAT GGAGGCCGTTTTTAAGGAGTTGAAGATTTGGGATAGGTTTGTGAGCATGT GTGTGGATGCTTTCCTTGCCCTGCGGGCGGAAGCGCCTGCAATTATTCGA TCATTTGTGATGATGTTCAGCAAGGCAGGATACGAAGAAGCACAAATACG AAGCTTCGTGCAAGGCAAGTTTAGCTTGAATGTACATGATTCTGAGAAGA AAGCAGGGGATTTGATCAGAAGACAGTTAGTTATGAGCTCCGGGGACATC AAGACCAAGTTCAAGGCGTTTGCTCATGCACACATCGATCCAGCTTGGTA CGGACTTTTGGAAAAAGGATTCCCGCCGGCTGTAGCCATCATGAAACTTG TGGACGCGAAGGAGCAGAAGGCTGCCAGGAAGCTATCGCAGAGACCCCAT GTTGTAGTTAGCGAGGAGCAAAAAATCCAGCTCTGA back to topprotein sequence of Gcaud1968.t1 >Gcaud1968.t1 ID=Gcaud1968.t1|Name=Gcaud1968.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=762bp
MTQDQQESAGSAPQLVTSSVSQSEDSSENDLRRLNRLSSATMLRTTFNAF ELHPGHLVNLLLAPDLEDNLTHEALLAANNVAIFRLLPLILAAIHRIGES PTHRQNYIKLVSVLRMRVAACRGIKLRFLLLIRNPAFAQQWNVKLVHRRD CYQSARHALDDYAREKSGTPSSSALSQADSASFRLADSKQVAGWLEDKKT LFSFAMRRVLHPEHGIHIRTINWFMRPFRGAFFGTELVDGIMERANFRSR SDAVALAQRMLDHGLIHKVGGHSSKFVDSKKRVYQCRMALQREDAGHCRC KINTNKVITSWCELGQQPIAIKQIEVQLPMDMIDLQSFEFWTSTAYVRDV EKGYRYGYRAITHPLYCGGLNAQVNLDFSKFLSDDTAASDNASSTSFGSS SADFASDLLTPRSVISTMEINDVRQDSSVIGSVVVRKVFSSIARPMIVEL RVPMENADLDEDSDHIILPPGILIKEGDNLMQDLGVEVMFQVFNHIWESS SLIKPKYEKPPYSFCYEVFPTSPTRGFMEAMTGLIPLKDYNWVNWRNRFG SDPERVEDILRSTVGSYIGAYICGGRDRHFDNVLVKDDQYVLHIDFGFLM GTSPPIDGPRIAIAPQMEAVFKELKIWDRFVSMCVDAFLALRAEAPAIIR SFVMMFSKAGYEEAQIRSFVQGKFSLNVHDSEKKAGDLIRRQLVMSSGDI KTKFKAFAHAHIDPAWYGLLEKGFPPAVAIMKLVDAKEQKAARKLSQRPH VVVSEEQKIQL* back to topmRNA from alignment at NODE_297_length_31759_cov_4.165656:7673..10061- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gcaud1968.t1 ID=Gcaud1968.t1|Name=Gcaud1968.t1|organism=Gracilaria caudata M_176_S67 male|type=mRNA|length=2389bp|location=Sequence derived from alignment at NODE_297_length_31759_cov_4.165656:7673..10061- (Gracilaria caudata M_176_S67 male) ATGACTCAGGACCAGCAAGAGTCGGCGGGCAGTGCCCCCCAGCTTGTCAC
TTCTTCCGTGAGTCAGTCGGAGGATTCTTCAGAGAATGACCTTCGTCGTC
TTAATCGTTTGTCGTCGGCCACCATGTTGCGGACCACCTTTAATGCATTT
GAGCTTCATCCGGGTCACCTGGTAAACCTTTTGTTAGCTCCTGACCTCGA
GGACAACCTAACGCACGAGGCCCTTCTTGCCGCCAATAATGTCGCCATTT
TCCGTCTGCTACCGCTCATCTTGGCTGCGATACACCGCATTGGCGAGTCA
CCCACTCACCGTCAGAACTACATAAAACTGGTGTCTGTTCTGCGCATGCG
CGTTGCTGCCTGTCGCGGTATCAAGTTGCGCTTTTTACTGTTGATTCGCA
ATCCTGCTTTCGCTCAGCAGTGGAACGTCAAACTCGTTCATCGAAGAGAT
TGTTACCAATCTGCCAGACATGCGCTCGATGACTATGCTCGCGAAAAGTC
CGGAACCCCCTCGTCGAGCGCTCTCTCACAAGCTGATTCTGCTTCGTTTC
GTCTCGCTGACAGCAAGCAAGTCGCTGGCTGGTTAGAGGACAAGAAGACT
CTCTTCAGTTTCGCAATGCGACGTGTACTGCATCCCGAACACGGCATTCA
CATTCGCACCATCAATTGGTTTATGCGTCCTTTCAGGGGCGCCTTTTTTG
GCACTGAACTGGTTGATGGTATTATGGAACGTGCCAATTTCAGGTCTAGA
AGTGATGCTGTTGCGCTCGCTCAACGAATGCTGGACCATGGCTTGATACA
TAAAGTTGGCGGCCACTCCTCGAAGTTTGTGGATTCGAAGAAGCGAGTAT
ACCAATGCCGAATGGCTTTGCAGCGTGAGGATGCTGGTCACTGTCGTTGT
AAGATCAATACTAATAAGGTCATTACTTCGTGGTGTGAGCTTGGGCAGCA
ACCAATTGCAATCAAACAAATTGAGGTGCAGCTCCCAATGGATATGATTG
ATTTGCAGAGCTTCGAGTTCTGGACAAGCACTGCGTATGTTCGCGATGTT
GAAAAGGGCTATCGCTATGGATATCGTGCTATCACGCATCCTTTGTACTG
CGGCGGTCTTAATGCGCAAGTTAATCTGGACTTCTCCAAATTCTTGTCGG
ATGATACTGCTGCGAGTGATAACGCGTCATCAACAAGCTTTGGTTCGTCG
TCAGCAGACTTTGCGAGCGACTTGTTGACACCGAGATCAGTGATTTCTAC
AATGGAAATCAACGACGTGCGTCAGGACAGTTCGGTCATTGGCTCTGTCG
TCGTTCGCAAAGTGTTCTCGAGCATCGCGCGCCCTATGATAGTCGAATTG
AGAGTACCCATGGAAAATGCCGATTTAGACGAAGATAGCGACCATATCAT
CCTGCCTCCTGGGATTTTGATCAAAGAAGGGGATAATCTTATGCAGGACT
TGGGTGTGGAGGTCATGTTTCAAGTATTCAACCACATCTGGGAGTCATCA
AGTCTCATTAAACCCAAGTATGAGAAGCCACCGTATAGCTTTTGCTATGA
GGTTTTCCCGACATCTCCAACACGGGGATTCATGGAGGCTATGACTGGAC
TCATTCCACTGAAGGATTATAACTGGGTGAACTGGAGAAATCGGTTTGGT
TCGGACCCCGAGCGAGTTGAAGATATTCTTCGTTCTACAGTCGGATCTTA
CATTGGAGCTTATATCTGCGGGTAAGTTTATGCGACATACTTCACTTTTC
TCGTATGCTTGGCTTATACTAACCGTTTTCTGTAACACTCTTGTTTTTCA
CTGCATCGCTGTGTTGTAACACAGAGGGAGAGACCGACATTTCGACAATG
TCTTGGTTAAAGATGATCAGTATGTTTTACATATTGACTTCGGCTTCCTG
ATGGGTACCAGTCCACCAATCGATGGACCTCGAATCGCGATTGCGCCACA
GATGGAGGCCGTTTTTAAGGAGTTGAAGATTTGGGATAGGTTTGTGAGCA
TGTGTGTGGATGCTTTCCTTGCCCTGCGGGCGGAAGCGCCTGCAATTATT
CGATCATTTGTGATGATGTTCAGCAAGGCAGGATACGAAGAAGCACAAAT
ACGAAGCTTCGTGCAAGGCAAGTTTAGCTTGAATGTACATGATTCTGAGA
AGAAAGCAGGGGATTTGATCAGAAGACAGTTAGTTATGAGCTCCGGGGAC
ATCAAGACCAAGTTCAAGGCGTTTGCTCATGCACACATCGATCCAGCTTG
GTACGGACTTTTGGAAAAAGGATTCCCGCCGGCTGTAGCCATCATGAAAC
TTGTGGACGCGAAGGAGCAGAAGGCTGCCAGGAAGCTATCGCAGAGACCC
CATGTTGTAGTTAGCGAGGAGCAAAAAATCCAGCTCTGA back to topCoding sequence (CDS) from alignment at NODE_297_length_31759_cov_4.165656:7673..10061- >Gcaud1968.t1 ID=Gcaud1968.t1|Name=Gcaud1968.t1|organism=Gracilaria caudata M_176_S67 male|type=CDS|length=2286bp|location=Sequence derived from alignment at NODE_297_length_31759_cov_4.165656:7673..10061- (Gracilaria caudata M_176_S67 male) ATGACTCAGGACCAGCAAGAGTCGGCGGGCAGTGCCCCCCAGCTTGTCAC TTCTTCCGTGAGTCAGTCGGAGGATTCTTCAGAGAATGACCTTCGTCGTC TTAATCGTTTGTCGTCGGCCACCATGTTGCGGACCACCTTTAATGCATTT GAGCTTCATCCGGGTCACCTGGTAAACCTTTTGTTAGCTCCTGACCTCGA GGACAACCTAACGCACGAGGCCCTTCTTGCCGCCAATAATGTCGCCATTT TCCGTCTGCTACCGCTCATCTTGGCTGCGATACACCGCATTGGCGAGTCA CCCACTCACCGTCAGAACTACATAAAACTGGTGTCTGTTCTGCGCATGCG CGTTGCTGCCTGTCGCGGTATCAAGTTGCGCTTTTTACTGTTGATTCGCA ATCCTGCTTTCGCTCAGCAGTGGAACGTCAAACTCGTTCATCGAAGAGAT TGTTACCAATCTGCCAGACATGCGCTCGATGACTATGCTCGCGAAAAGTC CGGAACCCCCTCGTCGAGCGCTCTCTCACAAGCTGATTCTGCTTCGTTTC GTCTCGCTGACAGCAAGCAAGTCGCTGGCTGGTTAGAGGACAAGAAGACT CTCTTCAGTTTCGCAATGCGACGTGTACTGCATCCCGAACACGGCATTCA CATTCGCACCATCAATTGGTTTATGCGTCCTTTCAGGGGCGCCTTTTTTG GCACTGAACTGGTTGATGGTATTATGGAACGTGCCAATTTCAGGTCTAGA AGTGATGCTGTTGCGCTCGCTCAACGAATGCTGGACCATGGCTTGATACA TAAAGTTGGCGGCCACTCCTCGAAGTTTGTGGATTCGAAGAAGCGAGTAT ACCAATGCCGAATGGCTTTGCAGCGTGAGGATGCTGGTCACTGTCGTTGT AAGATCAATACTAATAAGGTCATTACTTCGTGGTGTGAGCTTGGGCAGCA ACCAATTGCAATCAAACAAATTGAGGTGCAGCTCCCAATGGATATGATTG ATTTGCAGAGCTTCGAGTTCTGGACAAGCACTGCGTATGTTCGCGATGTT GAAAAGGGCTATCGCTATGGATATCGTGCTATCACGCATCCTTTGTACTG CGGCGGTCTTAATGCGCAAGTTAATCTGGACTTCTCCAAATTCTTGTCGG ATGATACTGCTGCGAGTGATAACGCGTCATCAACAAGCTTTGGTTCGTCG TCAGCAGACTTTGCGAGCGACTTGTTGACACCGAGATCAGTGATTTCTAC AATGGAAATCAACGACGTGCGTCAGGACAGTTCGGTCATTGGCTCTGTCG TCGTTCGCAAAGTGTTCTCGAGCATCGCGCGCCCTATGATAGTCGAATTG AGAGTACCCATGGAAAATGCCGATTTAGACGAAGATAGCGACCATATCAT CCTGCCTCCTGGGATTTTGATCAAAGAAGGGGATAATCTTATGCAGGACT TGGGTGTGGAGGTCATGTTTCAAGTATTCAACCACATCTGGGAGTCATCA AGTCTCATTAAACCCAAGTATGAGAAGCCACCGTATAGCTTTTGCTATGA GGTTTTCCCGACATCTCCAACACGGGGATTCATGGAGGCTATGACTGGAC TCATTCCACTGAAGGATTATAACTGGGTGAACTGGAGAAATCGGTTTGGT TCGGACCCCGAGCGAGTTGAAGATATTCTTCGTTCTACAGTCGGATCTTA CATTGGAGCTTATATCTGCGGAGGGAGAGACCGACATTTCGACAATGTCT TGGTTAAAGATGATCAGTATGTTTTACATATTGACTTCGGCTTCCTGATG GGTACCAGTCCACCAATCGATGGACCTCGAATCGCGATTGCGCCACAGAT GGAGGCCGTTTTTAAGGAGTTGAAGATTTGGGATAGGTTTGTGAGCATGT GTGTGGATGCTTTCCTTGCCCTGCGGGCGGAAGCGCCTGCAATTATTCGA TCATTTGTGATGATGTTCAGCAAGGCAGGATACGAAGAAGCACAAATACG AAGCTTCGTGCAAGGCAAGTTTAGCTTGAATGTACATGATTCTGAGAAGA AAGCAGGGGATTTGATCAGAAGACAGTTAGTTATGAGCTCCGGGGACATC AAGACCAAGTTCAAGGCGTTTGCTCATGCACACATCGATCCAGCTTGGTA CGGACTTTTGGAAAAAGGATTCCCGCCGGCTGTAGCCATCATGAAACTTG TGGACGCGAAGGAGCAGAAGGCTGCCAGGAAGCTATCGCAGAGACCCCAT GTTGTAGTTAGCGAGGAGCAAAAAATCCAGCTCTGA back to top
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