Gcaud2558.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2558.t1
Unique NameGcaud2558.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length204
Homology
BLAST of Gcaud2558.t1 vs. uniprot
Match: A0A2V3IXP6_9FLOR (DNA-3-methyladenine glycosylase 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXP6_9FLOR)

HSP 1 Score: 298 bits (764), Expect = 1.720e-100
Identity = 141/202 (69.80%), Postives = 168/202 (83.17%), Query Frame = 0
Query:    1 MAPAP-KRQKKDTRCEWCLSAPDYIQYHDEEWGVPLYDDKKVFEFLLLESFQAGLSWLTVLRKREAFANAFHDFDVDRIAAMTDKDVERLQNDASIIRHKLKIRAAINNAKAVITMREDGIDLAHYFWDWVDYVPQHNCKSGRWISKNELSDEIAKDLKKRGFKFVGSTIIYAHLQATGVINDHNPSCPRYKQVQKLVKKKP 201
            MAP P KR+KK+ RCEWCLSAP+   YHD EWGVP+YDD+K+FEFLLLE+FQAGLSWL +LRKR AFA AFH+FDV ++A MT  D+ RL  DASI+R+KLKI+AA+ NA+AVI MR+ G +LAHYFW WV Y P HN  +G  +SKN LSD+I+KDLKKRGFKFVGST+IYAHLQATG+INDH  +CPRYK VQKLV+ KP
Sbjct:   20 MAPPPSKRRKKELRCEWCLSAPENTLYHDTEWGVPVYDDQKMFEFLLLETFQAGLSWLLILRKRAAFAAAFHNFDVHKVANMTAHDMARLSQDASIVRNKLKIKAAVTNAQAVIQMRQQGTNLAHYFWQWVHYKPVHNLANGIAVSKNALSDDISKDLKKRGFKFVGSTVIYAHLQATGIINDHVKTCPRYKHVQKLVRDKP 221          
BLAST of Gcaud2558.t1 vs. uniprot
Match: A0A6L3ZHI6_9FLAO (DNA-3-methyladenine glycosylase I n=1 Tax=Phaeocystidibacter marisrubri TaxID=1577780 RepID=A0A6L3ZHI6_9FLAO)

HSP 1 Score: 235 bits (599), Expect = 6.610e-76
Identity = 112/178 (62.92%), Postives = 140/178 (78.65%), Query Frame = 0
Query:   13 RCEWCLSAPDYIQYHDEEWGVPLYDDKKVFEFLLLESFQAGLSWLTVLRKREAFANAFHDFDVDRIAAMTDKDVERLQNDASIIRHKLKIRAAINNAKAVITMR-EDGIDLAHYFWDWVDYVPQHNCKSG--RWISKNELSDEIAKDLKKRGFKFVGSTIIYAHLQATGVINDHNPSC 187
            RC WC + P Y++YHDEEWGVP  DD+K+FEFLLLE+FQAGLSW+T+LRKRE F NAF DFDVD +A  T KD+ERLQND  IIR++LKI++AI+NA+ ++ MR E+GI L+ YFW WV++ P  N  +      + + LSD I+KDLKKRGFKFVGST+IYAHLQATG+INDH   C
Sbjct:    3 RCSWCGNDPLYVKYHDEEWGVPFSDDQKMFEFLLLETFQAGLSWITILRKRENFRNAFADFDVDAVANFTAKDIERLQNDPGIIRNRLKIQSAISNAQLIVRMRDEEGIGLSDYFWKWVNHTPIVNSPASLKEVPATSNLSDAISKDLKKRGFKFVGSTVIYAHLQATGIINDHVVDC 180          
BLAST of Gcaud2558.t1 vs. uniprot
Match: A0A661ZTX3_9BACT (DNA-3-methyladenine glycosylase I n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A661ZTX3_9BACT)

HSP 1 Score: 226 bits (576), Expect = 2.610e-72
Identity = 108/187 (57.75%), Postives = 145/187 (77.54%), Query Frame = 0
Query:    9 KKDTRCEWCLSAPDYIQYHDEEWGVPLYDDKKVFEFLLLESFQAGLSWLTVLRKREAFANAFHDFDVDRIAAMTDKDVERLQNDASIIRHKLKIRAAINNAKAVITMREDGIDLAHYFWDWVDYVPQ-HNCKSGRWI-SKNELSDEIAKDLKKRGFKFVGSTIIYAHLQATGVINDHNPSCPRYKQV 193
            KK  RC+W  +   YI+YHD EWGVP+YDDKK+FEFL LESFQAGLSW+T+LRKR+ F  AF DFD  +IA   DK  E L +D  IIR++LKI+AAI+NAKA I ++ +    ++YFW +V+Y P+ +N K+ + + +K ELSD+I+KD+KKRGFKFVGSTIIY+H+QATG++NDH  +C RYK++
Sbjct:    3 KKIERCDWVSNDDLYIKYHDTEWGVPVYDDKKLFEFLTLESFQAGLSWITILRKRDNFRKAFDDFDYKKIALYNDKKFELLMSDVGIIRNRLKIKAAISNAKAFIKVQNEFESFSNYFWGFVNYKPKINNFKTKKDVPAKTELSDKISKDMKKRGFKFVGSTIIYSHMQATGMVNDHTTNCFRYKEI 189          
BLAST of Gcaud2558.t1 vs. uniprot
Match: A0A0R2SMP4_9FLAO (Uncharacterized protein n=2 Tax=unclassified Cryomorphaceae TaxID=253244 RepID=A0A0R2SMP4_9FLAO)

HSP 1 Score: 226 bits (575), Expect = 4.220e-72
Identity = 104/187 (55.61%), Postives = 136/187 (72.73%), Query Frame = 0
Query:   12 TRCEWCLSAPDYIQYHDEEWGVPLYDDKKVFEFLLLESFQAGLSWLTVLRKREAFANAFHDFDVDRIAAMTDKDVERLQNDASIIRHKLKIRAAINNAKAVITMREDGIDLAHYFWDWVDYVPQHNCKSGRWISKNELSDEIAKDLKKRGFKFVGSTIIYAHLQATGVINDHNPSCPRYKQVQKLVK 198
            ++C WC +APDY  YHDE WG P+YDD ++FEFL+LE+FQAGL+WL V RKREAFA  F  FDV ++AAMT++DVERL  D  IIR++ KIR AI NA+A + M  +G+ LAHYFW W +   Q      +  +  ELSD I+ DLKKRGF FVGST++YAHLQA G++NDH+ +C R  +V+ L +
Sbjct:    7 SKCAWCQTAPDYEAYHDEYWGRPVYDDARMFEFLILETFQAGLNWLMVWRKREAFAEVFAGFDVAQMAAMTEEDVERLAGDPRIIRNRAKIRGAIRNAQATLRMNAEGLGLAHYFWQWTNGEVQERLPGAKVPATTELSDRISVDLKKRGFSFVGSTVVYAHLQACGLVNDHDATCFRASEVRALAR 193          
BLAST of Gcaud2558.t1 vs. uniprot
Match: A0A850L4L8_9BACT (DNA-3-methyladenine glycosylase I n=1 Tax=Flavobacteriia bacterium TaxID=2044941 RepID=A0A850L4L8_9BACT)

HSP 1 Score: 215 bits (548), Expect = 4.090e-68
Identity = 106/177 (59.89%), Postives = 131/177 (74.01%), Query Frame = 0
Query:   13 RCEWCLSAPDYIQYHDEEWGVPLYDDKKVFEFLLLESFQAGLSWLTVLRKREAFANAFHDFDVDRIAAMTDKDVERLQNDASIIRHKLKIRAAINNAKAVITMREDGIDLAHYFWDWVDYVPQHNC--KSGRWISKNELSDEIAKDLKKRGFKFVGSTIIYAHLQATGVINDHNPSC 187
            RC WC   P Y++YHDEEWG P  DD ++FEFLLLE+FQAGLSW+T+L+KRE F  AF +F  + IAA  +  VE L +DA IIR++ KIRAAINNA+ V+ M+ +G+ L+ YFWDWV   P  N   + G   +K ELSDEI+KDLKKRGFKFVGST IYAHLQATG+I+DH   C
Sbjct:    3 RCAWCGEDPLYVKYHDEEWGRPFNDDHRMFEFLLLETFQAGLSWITILKKRENFRRAFDNFHPEVIAAYDETKVEELLSDAGIIRNQQKIRAAINNAQIVVKMKAEGLGLSKYFWDWVGGKPVVNQPKEMGDIPAKTELSDEISKDLKKRGFKFVGSTTIYAHLQATGIIDDHVVDC 179          
BLAST of Gcaud2558.t1 vs. uniprot
Match: UPI001655E52D (DNA-3-methyladenine glycosylase I n=1 Tax=Kordia aestuariivivens TaxID=2759037 RepID=UPI001655E52D)

HSP 1 Score: 215 bits (548), Expect = 4.520e-68
Identity = 102/186 (54.84%), Postives = 137/186 (73.66%), Query Frame = 0
Query:   13 RCEWCLSAPDYIQYHDEEWGVPLYDDKKVFEFLLLESFQAGLSWLTVLRKREAFANAFHDFDVDRIAAMTDKDVERLQNDASIIRHKLKIRAAINNAKAVITMREDGIDLAHYFWDWVDYVPQHNC--KSGRWISKNELSDEIAKDLKKRGFKFVGSTIIYAHLQATGVINDHNPSCPRYKQVQKL 196
            RC WC + P Y+ YHDEEWGVP+YDD+ +FEFL+LE+FQAGLSW+T+LRKRE F  AF +FD  +IA   +   +RL  D  IIR+KLKI++AI+NAKA + ++E+    ++Y W +VD  P  N   KS    +  ELSD ++KDLKKRGFKFVGST+IYAH+QATG++NDH   C RY++++ L
Sbjct:    8 RCTWCGNDPLYMAYHDEEWGVPVYDDETLFEFLILETFQAGLSWITILRKRENFRKAFDNFDYKKIANYGEDKYDRLLQDTGIIRNKLKIKSAISNAKAFMELQEEFGSFSNYMWQFVDRKPIQNVFKKSKEVPATTELSDTLSKDLKKRGFKFVGSTVIYAHMQATGMVNDHTTDCFRYEEIKNL 193          
BLAST of Gcaud2558.t1 vs. uniprot
Match: UPI00083449E2 (DNA-3-methyladenine glycosylase I n=1 Tax=Endozoicomonas ascidiicola TaxID=1698521 RepID=UPI00083449E2)

HSP 1 Score: 215 bits (547), Expect = 6.000e-68
Identity = 97/183 (53.01%), Postives = 133/183 (72.68%), Query Frame = 0
Query:   10 KDTRCEWCLSAPDYIQYHDEEWGVPLYDDKKVFEFLLLESFQAGLSWLTVLRKREAFANAFHDFDVDRIAAMTDKDVERLQNDASIIRHKLKIRAAINNAKAVITMREDGIDLAHYFWDWVDYVP--QHNCKSGRWISKNELSDEIAKDLKKRGFKFVGSTIIYAHLQATGVINDHNPSCPRY 190
            KD RC WC S P YIQYHD EWGVP +DDK +FEFL+LE  QAGLSW+T+L++RE + NAFHDFDV+++A M ++D+ERL  D  IIR++LKI++AI NA A I ++++    + Y W +VD+ P   H    G   +  E+SD ++KD+KKR F FVGSTI YA++Q+ G++NDH  SCP +
Sbjct:    2 KDPRCTWCHSDPLYIQYHDNEWGVPTHDDKTLFEFLVLEGAQAGLSWITILKRREGYRNAFHDFDVEKVARMKEQDIERLLQDTGIIRNRLKIKSAIKNANAFIKVQQEFGSFSQYLWSFVDHQPIINHRQTMGEVPATTEVSDRMSKDMKKRNFSFVGSTICYAYMQSMGLVNDHLISCPSF 184          
BLAST of Gcaud2558.t1 vs. uniprot
Match: A0A5N5Z5J5_9FLAO (DNA-3-methyladenine glycosylase I n=2 Tax=Kordia TaxID=221065 RepID=A0A5N5Z5J5_9FLAO)

HSP 1 Score: 215 bits (547), Expect = 6.620e-68
Identity = 100/186 (53.76%), Postives = 139/186 (74.73%), Query Frame = 0
Query:   13 RCEWCLSAPDYIQYHDEEWGVPLYDDKKVFEFLLLESFQAGLSWLTVLRKREAFANAFHDFDVDRIAAMTDKDVERLQNDASIIRHKLKIRAAINNAKAVITMREDGIDLAHYFWDWVDYVPQHNC-KSGRWI-SKNELSDEIAKDLKKRGFKFVGSTIIYAHLQATGVINDHNPSCPRYKQVQKL 196
            RC WC + P Y+ YHDEEWGVP+YDD+++FEFL+LE+FQAGLSW+T+LRKRE F  AF +FD  +IA   D+  ERL ND  IIR+KLKI+A I NA+A + ++E+    + Y W + D  P  N  K+ + + +  E+SD+++KDLKK+GFKFVGST+IYAH+QATG++NDH   C RY++++ L
Sbjct:    8 RCTWCGNDPLYVAYHDEEWGVPVYDDERLFEFLILETFQAGLSWITILRKRENFRKAFDNFDYKKIAQYGDEKFERLLNDKGIIRNKLKIKATITNAQAFMNIQEEFGSFSKYIWQFTDGKPIQNAFKTSKEVPATTEISDKLSKDLKKKGFKFVGSTVIYAHMQATGMVNDHTTDCFRYEELKNL 193          
BLAST of Gcaud2558.t1 vs. uniprot
Match: A0A6N6RHL0_9FLAO (DNA-3-methyladenine glycosylase I n=1 Tax=Phaeocystidibacter luteus TaxID=911197 RepID=A0A6N6RHL0_9FLAO)

HSP 1 Score: 214 bits (546), Expect = 7.000e-68
Identity = 104/178 (58.43%), Postives = 129/178 (72.47%), Query Frame = 0
Query:   12 TRCEWCLSAPDYIQYHDEEWGVPLYDDKKVFEFLLLESFQAGLSWLTVLRKREAFANAFHDFDVDRIAAMTDKDVERLQNDASIIRHKLKIRAAINNAKAVITMREDGIDLAHYFWDWVDYVP--QHNCKSGRWISKNELSDEIAKDLKKRGFKFVGSTIIYAHLQATGVINDHNPSC 187
             RC WC   P Y +YHDEEWG P  DD ++FEFL+LE+FQAGLSW+T+LRKRE F  AF +F  + IAA  +  VE L  DA IIR++ KIRAAINNA+ V+ M+E+G+ L+ YFW+WVD  P   H    G   +K ELSD I+KD+KKRGFKFVGST IYAHLQATG+++DH   C
Sbjct:    2 NRCAWCGDDPLYTKYHDEEWGQPFNDDHRMFEFLILETFQAGLSWITILRKRENFRRAFDNFHPEIIAAYDENKVEELLADAGIIRNQQKIRAAINNAQVVMKMQEEGLGLSEYFWNWVDGKPIVNHPKGMGDLPAKTELSDAISKDMKKRGFKFVGSTTIYAHLQATGIVDDHVVDC 179          
BLAST of Gcaud2558.t1 vs. uniprot
Match: R7Q861_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q861_CHOCR)

HSP 1 Score: 218 bits (555), Expect = 1.400e-67
Identity = 111/201 (55.22%), Postives = 138/201 (68.66%), Query Frame = 0
Query:    1 MAPAPKRQKKDTRCEWCLSAP-DYIQYHDEEWGVPLYDDKKVFEFLLLESFQAGLSWLTVLRKREAFANAFHDFDVDRIAAMTDKDVERLQNDASIIRHKLKIRAAINNAKAVITMRED-GIDLAHYFWDWVDYVPQHNC--KSGRWISKNELSDEIAKDLKKRGFKFVGSTIIYAHLQATGVINDHNPSCPRYKQVQKLV 197
            MA  P      TRC W LS   DYI YHD EWG P+Y D+ +FE LLLE+FQAGLSW  +LR+REAF  AFH FD  R++ MT+ DV RL  D +I+RH+ KIRAAI NA+AV+ MRED G+ LA YFW WV +V       +     S++E+S  IA+DLK+RG KFVG+T +YAH+QATGV+NDH   C RY +V K V
Sbjct:    1 MASGPSSAAAPTRCGWSLSGDEDYISYHDSEWGEPVYCDRAMFEHLLLETFQAGLSWALILRRREAFRAAFHGFDAWRVSEMTEADVARLAADRAIVRHEGKIRAAIGNARAVVRMREDEGLGLAEYFWRWVGFVQAQGTAREQSEMRSESEVSRSIARDLKRRGCKFVGATTMYAHMQATGVVNDHVVGCERYAEVGKRV 201          
The following BLAST results are available for this feature:
BLAST of Gcaud2558.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXP6_9FLOR1.720e-10069.80DNA-3-methyladenine glycosylase 1 n=1 Tax=Gracilar... [more]
A0A6L3ZHI6_9FLAO6.610e-7662.92DNA-3-methyladenine glycosylase I n=1 Tax=Phaeocys... [more]
A0A661ZTX3_9BACT2.610e-7257.75DNA-3-methyladenine glycosylase I n=1 Tax=Bacteroi... [more]
A0A0R2SMP4_9FLAO4.220e-7255.61Uncharacterized protein n=2 Tax=unclassified Cryom... [more]
A0A850L4L8_9BACT4.090e-6859.89DNA-3-methyladenine glycosylase I n=1 Tax=Flavobac... [more]
UPI001655E52D4.520e-6854.84DNA-3-methyladenine glycosylase I n=1 Tax=Kordia a... [more]
UPI00083449E26.000e-6853.01DNA-3-methyladenine glycosylase I n=1 Tax=Endozoic... [more]
A0A5N5Z5J5_9FLAO6.620e-6853.76DNA-3-methyladenine glycosylase I n=2 Tax=Kordia T... [more]
A0A6N6RHL0_9FLAO7.000e-6858.43DNA-3-methyladenine glycosylase I n=1 Tax=Phaeocys... [more]
R7Q861_CHOCR1.400e-6755.22Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005019Methyladenine glycosylasePFAMPF03352Adenine_glycocoord: 16..189
e-value: 5.7E-71
score: 238.0
NoneNo IPR availableGENE3D1.10.340.30Hypothetical protein; domain 2coord: 12..195
e-value: 9.5E-75
score: 252.1
NoneNo IPR availablePANTHERPTHR30037:SF4DNA-3-METHYLADENINE GLYCOSYLASE Icoord: 8..195
NoneNo IPR availablePANTHERPTHR30037DNA-3-METHYLADENINE GLYCOSYLASE 1coord: 8..195
IPR011257DNA glycosylaseSUPERFAMILY48150DNA-glycosylasecoord: 12..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_296_length_31928_cov_4.500110contigNODE_296_length_31928_cov_4.500110:5367..5978 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2558.t1Gcaud2558.t1Gracilaria caudata M_176_S67 malemRNANODE_296_length_31928_cov_4.500110 5367..5978 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2558.t1 ID=Gcaud2558.t1|Name=Gcaud2558.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=204bp
MAPAPKRQKKDTRCEWCLSAPDYIQYHDEEWGVPLYDDKKVFEFLLLESF
QAGLSWLTVLRKREAFANAFHDFDVDRIAAMTDKDVERLQNDASIIRHKL
KIRAAINNAKAVITMREDGIDLAHYFWDWVDYVPQHNCKSGRWISKNELS
DEIAKDLKKRGFKFVGSTIIYAHLQATGVINDHNPSCPRYKQVQKLVKKK
PKQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005019Adenine_glyco
IPR011257DNA_glycosylase