Gcaud2559.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2559.t1
Unique NameGcaud2559.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length221
Homology
[Close]
BLAST of Gcaud2559.t1 vs. uniprot
Match: A0A2V3IZ05_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ05_9FLOR)

HSP 1 Score: 185 bits (470), Expect = 5.490e-55
Identity = 108/245 (44.08%), Postives = 135/245 (55.10%), Query Frame = 0 
Query:   33 LHLYATALFIPGSPQLEPAPQTAPAASYAVYLHSTDHQVRVAQPLAASLQSYRTASLKALLCVLQLSNCLCLQHVHVVCDDDVLVDLFHTYISS--AQPENSHPEQLISSENMAIWRAIHVSAD-------------------------------------------------------AFKPPLKRTGSLVEGTDDYGRARIVAAVCPNCGATFEHLHELERHVECDCPEVLDEWFAHTKIVKN 220
            + LYA A F P +    P+ QT  AA+YAVYLH+++H +R+AQPL    Q+YRTA L+++L  L+L+NCLCL +V +  DD  LV+LFH       A    S P    S E+MA+WRAI   AD                                                       A++P LKRTGSLVE TD YGR +IV AVCP C A F+HLH+LERHVE DCPE+LDEWFAHTKIVK+
Sbjct:   24 VELYAAAFFRPPTAHRAPSKQTVAAATYAVYLHTSEHHLRLAQPLVTPHQTYRTAVLQSVLSALELANCLCLPYVRLCVDDAQLVNLFHVERPRRLADTVRSAPADFASPEDMALWRAILSLADTFSERGATLQLIQAQSCQSLRTVRSLCESAVHQHEYCSNCECNYGPLFTPHDCGPAYQPSLKRTGSLVERTDAYGRPQIVEAVCPRCSAKFQHLHQLERHVESDCPELLDEWFAHTKIVKD 268
The following BLAST results are available for this feature:
BLAST of Gcaud2559.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IZ05_9FLOR5.490e-5544.08Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_296_length_31928_cov_4.500110contigNODE_296_length_31928_cov_4.500110:6766..7593 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2559.t1Gcaud2559.t1Gracilaria caudata M_176_S67 malemRNANODE_296_length_31928_cov_4.500110 6766..7593 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2559.t1 ID=Gcaud2559.t1|Name=Gcaud2559.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=221bp
MPTLHDNKERQSDDGSVHCPLDDCGDDPYFLPLHLYATALFIPGSPQLEP
APQTAPAASYAVYLHSTDHQVRVAQPLAASLQSYRTASLKALLCVLQLSN
CLCLQHVHVVCDDDVLVDLFHTYISSAQPENSHPEQLISSENMAIWRAIH
VSADAFKPPLKRTGSLVEGTDDYGRARIVAAVCPNCGATFEHLHELERHV
ECDCPEVLDEWFAHTKIVKN*
back to top