Gcaud7617.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7617.t1
Unique NameGcaud7617.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length271
Homology
BLAST of Gcaud7617.t1 vs. uniprot
Match: A0A2V3INT2_9FLOR (YqaJ domain-containing protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INT2_9FLOR)

HSP 1 Score: 176 bits (446), Expect = 2.000e-46
Identity = 86/182 (47.25%), Postives = 124/182 (68.13%), Query Frame = 0
Query:   90 LCFEKEFIESVVSERARMYCLAVVENLETQQNARVLPEGRLRYVALFLEPILRKTIEWLNELILLRKKDRKLLGLYDGFRFLAVLLMSHCTGFSLDKTISIMNENGLNPPRLELMHFILSNIMAFSPTLR-FESEMTWVPQRDLTRNLTLFERTAFEETCKLFLAPLHLFCTLDDDLYGTRA 270
            L  E  FI   V ERAR++C + VE L+ + NAR LP  R+ ++ L ++ +LR  + W+NE I L ++D +LL ++  + F++VLL+SHCTGFS+ KTI I+   G++PP + ++ FI  NI+AFSPT R  +   TW+ QRD T  LT  E+TAF +TCK+F++P +   TLDDDLYGTRA
Sbjct:   77 LLLEDLFISEAVEERARLFCESAVERLDLELNARQLPSTRVGHIVLLMDDMLRMCLRWINEYISLYRRDMELLRMHHLYGFVSVLLLSHCTGFSMAKTIDILRAEGVDPPHIAIVRFICGNILAFSPTDRGLDGGGTWLAQRDQTPLLTQLEKTAFRQTCKVFVSPNYTLATLDDDLYGTRA 258          
BLAST of Gcaud7617.t1 vs. uniprot
Match: A0A2V3IMJ3_9FLOR (YqaJ domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMJ3_9FLOR)

HSP 1 Score: 175 bits (443), Expect = 2.910e-46
Identity = 85/181 (46.96%), Postives = 123/181 (67.96%), Query Frame = 0
Query:   90 LCFEKEFIESVVSERARMYCLAVVENLETQQNARVLPEGRLRYVALFLEPILRKTIEWLNELILLRKKDRKLLGLYDGFRFLAVLLMSHCTGFSLDKTISIMNENGLNPPRLELMHFILSNIMAFSPTLR-FESEMTWVPQRDLTRNLTLFERTAFEETCKLFLAPLHLFCTLDDDLYGTR 269
            L  E  FI   V ERAR++C + VE L+ + NAR LP  R+ ++ L ++ +LR  + W+NE I L ++D +LL ++  + F++VLL+SHCTGFS+ KTI I+   G++PP + ++ FI  NI+AFSPT R  +   TW+ QRD T  LT  E+TAF +TCK+F++P +   TLDDDLYGTR
Sbjct:   77 LLLEDVFISEAVEERARLFCESAVERLDLELNARQLPSTRVGHIVLLMDDMLRMCLRWINEYISLYRRDMELLRMHHLYGFVSVLLLSHCTGFSMAKTIDILRAEGVDPPHIAIVRFICGNILAFSPTGRGLDGGGTWLAQRDQTPLLTQLEKTAFRQTCKVFVSPNYTLATLDDDLYGTR 257          
BLAST of Gcaud7617.t1 vs. uniprot
Match: A0A2V3IIG9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIG9_9FLOR)

HSP 1 Score: 149 bits (375), Expect = 1.200e-40
Identity = 77/179 (43.02%), Postives = 110/179 (61.45%), Query Frame = 0
Query:   93 EKEFIESVVSERARMYCLAVVENLETQQNARVLPEGRLRYVALFLEPILRKTIEWLNELILLRKKDRKLLGLYDGFRFLAVLLMSHCTGFSLDKTISIMNENGLNPPRLELMHFILSNIMAFSPTLR-FESEMTWVPQRDLTRNLTLFERTAFEETCKLFLAPLHLFCTLDDDLYGTRA 270
            EK+F++ ++  RAR+ C   V N++ + +   LP  R   V LF   +L + +EWLN  I L   D  +  L D +R++AVLL+SH TG S DKT+S++ ++G   P L+ + FI  NI+ +S T R  + E  W  QRD TR L+ FE  A  +T K+F +PLHL  TLDDDL+GTRA
Sbjct:    2 EKDFVDRLIQHRARLLCDTAVNNMKLECSVTGLPPTRCGLVVLFANGVLHQLLEWLNAFIRLNDLDEPVPSLTDMYRYVAVLLLSHTTGLSFDKTVSVLRQSGSIVPSLDRVRFIAENILVYSLTGRGTDGEFQWNSQRDQTRQLSEFEHLALCDTRKVFFSPLHLLATLDDDLFGTRA 180          
BLAST of Gcaud7617.t1 vs. uniprot
Match: A0A2V3IT94_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT94_9FLOR)

HSP 1 Score: 149 bits (376), Expect = 1.690e-37
Identity = 80/192 (41.67%), Postives = 112/192 (58.33%), Query Frame = 0
Query:   80 WVFEDFNTDALCFEKEFIESVVSERARMYCLAVVENLETQQNARVLPEGRLRYVALFLEPILRKTIEWLNELILLRKKDRKLLGLYDGFRFLAVLLMSHCTGFSLDKTISIMNENGLNPPRLELMHFILSNIMAFSPTLRF-ESEMTWVPQRDLTRNLTLFERTAFEETCKLFLAPLHLFCTLDDDLYGTRA 270
            W       + +  E  F E  +  RARM+C   V  L+ Q +AR LP  R  +  L L+  + +   W+NE I LR KD++ + + + +R+++VLL+SH TGFS +KTI ++ + G   P L+   FI  NI+A+ PT R  + EM    QRD TR L+ FE   F +T K+F  PLHL  TLDDDLYGTRA
Sbjct:  103 WTLNRTACETVVLESAFAEKFIQNRARMFCSNAVTQLKLQCDARRLPCTRCGFTVLLLQGFIDQLRNWVNEDIRLRNKDQEYVSIAEMYRYVSVLLLSHTTGFSFEKTIEVLCQAGSTAPSLDGFRFIADNILAYDPTGRGRQGEMHLNAQRDQTRQLSEFESITFRDTRKVFFCPLHLLATLDDDLYGTRA 294          
BLAST of Gcaud7617.t1 vs. uniprot
Match: A0A2V3ID74_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID74_9FLOR)

HSP 1 Score: 145 bits (367), Expect = 7.070e-36
Identity = 75/165 (45.45%), Postives = 108/165 (65.45%), Query Frame = 0
Query:  107 MYCLAVVENLETQQNARVLPEGRLRYVALFLEPILRKTIEWLNELILLRKKDRKLLGLYDGFRFLAVLLMSHCTGFSLDKTISIMNENGLNPPRLELMHFILSNIMAFSPTLRF-ESEMTWVPQRDLTRNLTLFERTAFEETCKLFLAPLHLFCTLDDDLYGTRA 270
            M+C   V  L+ Q +AR LP  R  +  L L+ ++ +   W+NE I LR KD++ + + + +R+++VLL+SH TGFS +KTI ++ + G   P L+ + FI  NI+A++PT R  + EM W  QRD TR+L+ FE  AF +T K+F  PLHL  TLDDDLYGTRA
Sbjct:    1 MFCSNAVTQLKLQCDARSLPCIRCGFTVLLLQGLIDQLRNWVNEDIRLRNKDQECVSIAEMYRYVSVLLLSHTTGFSFEKTIEVLRQAGSTAPSLDRVRFIADNILAYAPTGRGRQGEMHWNAQRDQTRHLSEFESIAFRDTRKVFFCPLHLLATLDDDLYGTRA 165          
BLAST of Gcaud7617.t1 vs. uniprot
Match: A0A2V3IPL2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPL2_9FLOR)

HSP 1 Score: 137 bits (344), Expect = 7.590e-33
Identity = 65/135 (48.15%), Postives = 95/135 (70.37%), Query Frame = 0
Query:  137 LEPILRKTIEWLNELILLRKKDRKLLGLYDGFRFLAVLLMSHCTGFSLDKTISIMNENGLNPPRLELMHFILSNIMAFSPTLR-FESEMTWVPQRDLTRNLTLFERTAFEETCKLFLAPLHLFCTLDDDLYGTRA 270
            ++ +LR  + W+NE I L ++D +LL ++  + F++VLL+SHCTGFS+ KTI I+   G++PP + ++ FI  NI+AFSPT R  +   TW+ QRD T  LT  E+ AF +TCK+F++P +   TLDDDLYGTRA
Sbjct:    1 MDDMLRMCLRWINEYISLYRRDMELLRMHHLYGFVSVLLLSHCTGFSMAKTIDILRAEGVDPPHIAIVRFICGNILAFSPTGRGLDGGGTWLAQRDQTPLLTQLEKKAFRQTCKVFVSPNYTLATLDDDLYGTRA 135          
BLAST of Gcaud7617.t1 vs. uniprot
Match: A0A0H5R1V3_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R1V3_9EUKA)

HSP 1 Score: 125 bits (314), Expect = 5.350e-30
Identity = 65/180 (36.11%), Postives = 106/180 (58.89%), Query Frame = 0
Query:   93 EKEFIESVVSERARMYCLAVVENLETQQNARVLPEGRLRYVALFLEPILRKTIEWLNELILLRKK-DRKLLGLYDGFRFLAVLLMSHCTGFSLDKTISIMNENGLNPPRLELMHFILSNIMAFSPTLRFE-SEMTWVPQRDLTRNLTLFERTAFEETCKLFLAPLHLFCTLDDDLYGTRA 270
            + E+ ++ + ER+R++C+  +E L  Q   + L   R+    L +  +L + + WL + + L    +   L +   +++LA++  SHCTGFSL+ T +IM +   + P L+++ FI  NI+AFSP+ R      +W  QRD+T NLT FE+ +F  +  +F+ P H   TLDDDLYGTRA
Sbjct:   61 QDEYSDNTIGERSRLFCMKAMERLGDQLRMKGLQSTRVGITILLVNDVLTQCLHWLQDYVRLHDVGNAPELSMSAMYQYLAMMFYSHCTGFSLNHTWTIMEKLNQHTPSLDVIRFISQNILAFSPSNRGNMGANSWSSQRDMTPNLTAFEKVSFSVSNSIFVVPNHTTATLDDDLYGTRA 240          
BLAST of Gcaud7617.t1 vs. uniprot
Match: A0A0H5R1W9_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R1W9_9EUKA)

HSP 1 Score: 125 bits (314), Expect = 4.040e-29
Identity = 65/180 (36.11%), Postives = 106/180 (58.89%), Query Frame = 0
Query:   93 EKEFIESVVSERARMYCLAVVENLETQQNARVLPEGRLRYVALFLEPILRKTIEWLNELILLRKK-DRKLLGLYDGFRFLAVLLMSHCTGFSLDKTISIMNENGLNPPRLELMHFILSNIMAFSPTLRFE-SEMTWVPQRDLTRNLTLFERTAFEETCKLFLAPLHLFCTLDDDLYGTRA 270
            + E+ ++ + ER+R++C+  +E L  Q   + L   R+    L +  +L + + WL + + L    +   L +   +++LA++  SHCTGFSL+ T +IM +   + P L+++ FI  NI+AFSP+ R      +W  QRD+T NLT FE+ +F  +  +F+ P H   TLDDDLYGTRA
Sbjct:   61 QDEYSDNTIGERSRLFCMKAMERLGDQLRMKGLQSTRVGITILLVNDVLTQCLHWLQDYVRLHDVGNAPELSMSAMYQYLAMMFYSHCTGFSLNHTWTIMEKLNQHTPSLDVIRFISQNILAFSPSNRGNMGANSWSSQRDMTPNLTAFEKVSFSVSNSIFVVPNHTTATLDDDLYGTRA 240          
BLAST of Gcaud7617.t1 vs. uniprot
Match: R7QG12_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG12_CHOCR)

HSP 1 Score: 123 bits (309), Expect = 2.710e-28
Identity = 65/158 (41.14%), Postives = 92/158 (58.23%), Query Frame = 0
Query:  113 VENLETQQNARVLPEGRLRYVALFLEPILRKTIEWLNELILLRKKDRKLLGLYDGFRFLAVLLMSHCTGFSLDKTISIMNENGLNPPRLELMHFILSNIMAFSPTLRFESEMTWVPQRDLTRNLTLFERTAFEETCKLFLAPLHLFCTLDDDLYGTRA 270
            +  L+T + A  +   R  ++ L ++ +L+   +W+NE I L       +GL D +R++AVLL SH TG S +KT+ +      NPP    + FI  N +A S T R   E  W  QRD T+ L  FE+ A+E T K+FL+P+H F TLDDDLYGTRA
Sbjct:    1 MSQLKTARVANEVNSTRAGHLILLMDDVLQHCRKWMNEHIALHSLGTHPIGLDDLYRYVAVLLTSHLTGLSFEKTVDLFTRLNCNPPSTHRVRFISRNNLAHSATGRGRGESAWSAQRDETQYLDAFEKAAYEMTRKIFLSPVHTFATLDDDLYGTRA 158          
BLAST of Gcaud7617.t1 vs. uniprot
Match: A0A2V3IU89_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU89_9FLOR)

HSP 1 Score: 96.3 bits (238), Expect = 4.340e-19
Identity = 49/104 (47.12%), Postives = 69/104 (66.35%), Query Frame = 0
Query:  168 FRFLAVLLMSHCTGFSLDKTISIMNENGLNPPRLELMHFILSNIMAFSPTLR-FESEMTWVPQRDLTRNLTLFERTAFEETCKLFLAPLHLFCTLDDDLYGTRA 270
            +R++AVLL+SH T FS+ +TI ++ ++G + P LE + FI SNI+ FS T R  + +M W  QRD T+ L   E+ +F +T K F   +HL  TLDDDLY TRA
Sbjct:    2 YRYVAVLLLSHTTRFSICETIDVLRQSGNSTPSLERIRFIASNILTFSATGRGHDEQMEWNSQRDQTQQLEEIEQLSFSDTKKRFFVRIHLLATLDDDLYVTRA 105          
The following BLAST results are available for this feature:
BLAST of Gcaud7617.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A2V3INT2_9FLOR2.000e-4647.25YqaJ domain-containing protein n=2 Tax=Gracilariop... [more]
A0A2V3IMJ3_9FLOR2.910e-4646.96YqaJ domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IIG9_9FLOR1.200e-4043.02Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IT94_9FLOR1.690e-3741.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ID74_9FLOR7.070e-3645.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IPL2_9FLOR7.590e-3348.15Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A0H5R1V3_9EUKA5.350e-3036.11Uncharacterized protein n=1 Tax=Spongospora subter... [more]
A0A0H5R1W9_9EUKA4.040e-2936.11Uncharacterized protein (Fragment) n=1 Tax=Spongos... [more]
R7QG12_CHOCR2.710e-2841.14Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IU89_9FLOR4.340e-1947.12Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 221..270
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..161
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 184..202
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..183
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 203..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2884_length_4470_cov_5.310345contigNODE_2884_length_4470_cov_5.310345:1368..2180 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7617.t1Gcaud7617.t1Gracilaria caudata M_176_S67 malemRNANODE_2884_length_4470_cov_5.310345 1368..2180 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7617.t1 ID=Gcaud7617.t1|Name=Gcaud7617.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=271bp
MDDEITPNPVHLKESDKDSDDILDVPIAQLRYHSRNHAPTFLDPQPNSRP
RPKPKGAGSVRARRKVATSRENFLSGTTDWVFEDFNTDALCFEKEFIESV
VSERARMYCLAVVENLETQQNARVLPEGRLRYVALFLEPILRKTIEWLNE
LILLRKKDRKLLGLYDGFRFLAVLLMSHCTGFSLDKTISIMNENGLNPPR
LELMHFILSNIMAFSPTLRFESEMTWVPQRDLTRNLTLFERTAFEETCKL
FLAPLHLFCTLDDDLYGTRA*
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