Gcaud7655.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud7655.t2
Unique Name	Gcaud7655.t2
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	220

Homology

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BLAST of Gcaud7655.t2 vs. uniprot
Match: A0A2V3IES1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IES1_9FLOR)

HSP 1 Score: 97.1 bits (240), Expect = 6.790e-20
Identity = 80/228 (35.09%), Postives = 111/228 (48.68%), Query Frame = 0

Query:    1 LGGSRSWIQCKGHFRNLFAVGRITRGNDESKSWIVHPDVNGKEKEETTKP------SAEEKAKSQXXXXXXXXXXXXXXXXXXGNLKD-----AIVSTSNPRESDDNISVGKTQAKTTNGEVRRSASIDSIINPTSQDENELSASNMQNPHNQLNREHGPPDYHVSHKNNAEATKKVYVVPQSTRVSEQQDFEVSRIRETAIFMSKQAAAKEAYERSNCEPAGEKDLR 217
            L GSRSW+QCKGHFRNL +VG+IT+     + W VH + + K +E    P      S  E+ + +                   N ++       V+T    E  DNI         T  +  RSASID +IN  SQ+ +   A  M +  N ++ +    +     + N+  +   + V  S  VS +QD  V R RETAIFMSKQAAAKEA+ERSN +   E D+R
Sbjct:  214 LHGSRSWVQCKGHFRNLLSVGKITQNKKGRQLWEVHEEASIKSEEAPRIPTKALTSSKYEEPRGKSVKANGSHISSTAPQSSTHNQENNPSSATNVNTRKKTERQDNIQNNFRNG--TGAKTGRSASIDCLINNISQERDNRKAQ-MLHRTNAVDGDQSQREIIGRPRENSIRSNDAHFVAGSEGVSGEQDVIVGRDRETAIFMSKQAAAKEAFERSNPDATRESDIR 438

The following BLAST results are available for this feature:

BLAST of Gcaud7655.t2 vs. uniprot

BLAST of Gcaud7655.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IES1_9FLOR	6.790e-20	35.09	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..144

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_273_length_32656_cov_4.516229	contig	NODE_273_length_32656_cov_4.516229:6623..7282 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud7655.t2	Gcaud7655.t2	Gracilaria caudata M_176_S67 male	mRNA	NODE_273_length_32656_cov_4.516229 6623..7282 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud7655.t2 ID=Gcaud7655.t2|Name=Gcaud7655.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=220bp
LGGSRSWIQCKGHFRNLFAVGRITRGNDESKSWIVHPDVNGKEKEETTKP
SAEEKAKSQGKTSKHTSPRNSSNGTANGNLKDAIVSTSNPRESDDNISVG
KTQAKTTNGEVRRSASIDSIINPTSQDENELSASNMQNPHNQLNREHGPP
DYHVSHKNNAEATKKVYVVPQSTRVSEQQDFEVSRIRETAIFMSKQAAAK
EAYERSNCEPAGEKDLRRV*