Gcaud2332.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2332.t1
Unique NameGcaud2332.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length462
Homology
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BLAST of Gcaud2332.t1 vs. uniprot
Match: A0A2V3J4A6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4A6_9FLOR)

HSP 1 Score: 266 bits (681), Expect = 9.520e-82
Identity = 129/236 (54.66%), Postives = 178/236 (75.42%), Query Frame = 0 
Query:    1 MRSVLSCQGFLIFVGETDDENASLCRHAFPDDLWIHLSERASPHAVISIGDLKLLSGQEDRYRRTPDGRKLLDLGPTIYESALLVKFLSDSREEDESNAVYTRADTLLLNEANRSSGGSTYDILSGNTSHQDDDFAEMPGRVLLTRMPHFYRIEHDEHKVLQLLARSERSGSTGNMDREYAVWKEIMLRREATSRREWYMRRSYGEQ-IFQDDSDDDSEVENGEIANFDTMEQNGE 235
            MRSVLSCQGF I +GE+D E  SLCRHA PDD+W+HL ERASPHA+I+IG L+LL  Q +  RR+ DGR++LDL  TI+E+A LVKFLSD REE+ S+  Y RAD L +N+AN    G+ YD+++G+  H+DD+ A+MPG V+ TR+P F+ +  DE KV +LLARSE+SG  G MD+E +VWKE++LR++A +RR+WY+RR   ++    +DS+DDSE +  EI + +T E+NG+
Sbjct:    1 MRSVLSCQGFQINIGESDSEINSLCRHALPDDIWVHLHERASPHAIIAIGQLRLLDAQGEHLRRSSDGRRVLDLSLTIWEAAQLVKFLSDVREENISSIAYARADVLFINDANDGGDGTAYDVIAGSCVHKDDEIADMPGSVITTRVPRFHEVALDETKVFELLARSEKSGDGGTMDQERSVWKEVLLRKQAINRRDWYVRRVSADRGDLDEDSNDDSEQDMREIEDLETAERNGD 236
The following BLAST results are available for this feature:
BLAST of Gcaud2332.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J4A6_9FLOR9.520e-8254.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..461
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 414..442
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..361
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 372..399

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1080_length_14143_cov_5.034515contigNODE_1080_length_14143_cov_5.034515:11100..12485 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2332.t1Gcaud2332.t1Gracilaria caudata M_176_S67 malemRNANODE_1080_length_14143_cov_5.034515 11100..12485 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2332.t1 ID=Gcaud2332.t1|Name=Gcaud2332.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=462bp
MRSVLSCQGFLIFVGETDDENASLCRHAFPDDLWIHLSERASPHAVISIG
DLKLLSGQEDRYRRTPDGRKLLDLGPTIYESALLVKFLSDSREEDESNAV
YTRADTLLLNEANRSSGGSTYDILSGNTSHQDDDFAEMPGRVLLTRMPHF
YRIEHDEHKVLQLLARSERSGSTGNMDREYAVWKEIMLRREATSRREWYM
RRSYGEQIFQDDSDDDSEVENGEIANFDTMEQNGEHDENHDAHDDAHEDA
HDHIDDMSVEQREASNSDSEEAHKCDANEKKTEYKPKPEEQNCVSAKPTE
EVQVQRFKDMKNGENDQAEDSKTYDSKKEPMTVTEKEKKTTKPALNPLEH
DKDEKGKRNTVVQANDAKYPESNKESTVDVVEDRLAHDHDNEQDQKKNPV
KKPPCLNVVPEKRPNQDQNEKRRNVVRAVEKKTHEEQTGKAKSTSEVLEN
RILDGMENRAS*
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