Gcaud1764.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud1764.t1 vs. uniprot
Match: A0A2V3IPK1_9FLOR (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPK1_9FLOR) HSP 1 Score: 323 bits (829), Expect = 1.620e-108 Identity = 186/268 (69.40%), Postives = 205/268 (76.49%), Query Frame = 0
Query: 1 MFAFAAPFAPCSLRRA--PIAAP--------------SLRTRLARTARHAAPRPSRAPRMSLTPXXXXXXXEALCALLLSDISTVNQNSLFATAFVFFLTFWGAISFVKGSTKARITQASFTLQQSPSDIAKKTARYLMERSFVADPEKDSRAGVMTFTGKVRASSSVASILVAVAASGLWSLTYILNFILPTQYQSPYWNLLTLLAFAVVPWYWNAASRTEEVKVMVEEEEQGSTLYVKGHRDEIEQLEKAFNWKRNAPVYEGDEQQ 252
MFAFAA FAP L A P AP S+R + AR S +P MS+ P AL LLL+DISTVN+NSLFATAFVFFLTFWG +SFVKGSTK RITQASFTLQ+ +DIAKKTARYLM+RSFVADPEKD+R GVMTFTGKVRASSSVASILVAVAASGLWS TYILNFILP QYQSPYW LT L+F VVPWYW ASRTE+VKVMVEE+E STLY+KGHRDEIE+LEKAF+WKRN PVYEG+EQ+
Sbjct: 1 MFAFAASFAPQVLSNAVRPATAPRRLHATNSHFISPLSIRRQTARNVS------STSPTMSVEPPI------ALSNLLLADISTVNRNSLFATAFVFFLTFWGGVSFVKGSTKPRITQASFTLQEPSADIAKKTARYLMQRSFVADPEKDTRKGVMTFTGKVRASSSVASILVAVAASGLWSFTYILNFILPQQYQSPYWGWLTALSFLVVPWYWKQASRTEQVKVMVEEDEGLSTLYLKGHRDEIEELEKAFSWKRNPPVYEGEEQE 256
BLAST of Gcaud1764.t1 vs. uniprot
Match: A0A7S1ERL7_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ERL7_9RHOD) HSP 1 Score: 173 bits (438), Expect = 2.150e-49 Identity = 92/182 (50.55%), Postives = 125/182 (68.68%), Query Frame = 0
Query: 70 NQNSLFATAFVFFLTFWGAISFVKGSTKARITQASFTLQQSPSDIAKKTARYLMERSFVADPEKDSRAGVMTFTGKVRASSSVASILVAVAASGLWSLTYILNFILPTQYQSPYWNLLTLLAFAVVPWYWNAASRTEEVKVMVEEE---EQG-STLYVKGHRDEIEQLEKAFNWKRNAPVYE 247
N SL T VFFLTFWG ISFVKGSTKARI Q ++++Q P+D+A++TA + + RSF + E D R GV+TF G V S+++A++LV A GL L IL+ +LP QYQSP W + L+ V PWYWN A R E+VK+M+EE E+G +T+++KGHRDE+ + E+A +KRN P E
Sbjct: 88 NTQSLGITGLVFFLTFWGLISFVKGSTKARIEQRNYSVQGDPADLARRTAAHFLGRSFAINREADKRPGVVTFEGMVAPSTALAALLVFCLAIGLSGLVIILDLVLPEQYQSPLWWNIVWLSGLVAPWYWNGAKRVEQVKLMIEENSETEKGMNTIFIKGHRDELLEFEQALGYKRNEPAEE 269
BLAST of Gcaud1764.t1 vs. uniprot
Match: A0A7S1XHM9_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XHM9_9RHOD) HSP 1 Score: 162 bits (410), Expect = 4.590e-45 Identity = 89/176 (50.57%), Postives = 116/176 (65.91%), Query Frame = 0
Query: 70 NQNSLFATAFVFFLTFWGAISFVKGSTKARITQASFTLQQSPSDIAKKTARYLMERSFVADPEKDSRAGVMTFTGKVRASSSVASILVAVAASGLWSLTYILNFILPTQYQSPYWNLLTLLAFAVVPWYWNAASRTEEVKVMVEEE---EQGSTLYVKGHRDEIEQLEKAFNWKRN 242
N SL T VFFLTFWG ISFVKG+TKARI Q ++T+ + PS IA +A++ M RS+ + E D+R GV+TF G V S+ +A +LV A+GL L ILN +LP Y SP W L L+ V PWYW ASR E+VK+M+EE +T+Y+KGHRDE+ + EKA +KRN
Sbjct: 102 NTKSLGITGVVFFLTFWGLISFVKGATKARIEQRNYTVAEDPSAIAAASAKHFMGRSYRINREADTRPGVVTFEGDVAPSTFLALLLVFSLAAGLSGLVVILNTLLPESYHSPLWWNLDWLSLLVAPWYWKGASRIEQVKMMIEESFDSPSANTVYIKGHRDELMEYEKALGYKRN 277
BLAST of Gcaud1764.t1 vs. uniprot
Match: A0A1X6NQV9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NQV9_PORUM) HSP 1 Score: 160 bits (406), Expect = 1.240e-44 Identity = 90/197 (45.69%), Postives = 124/197 (62.94%), Query Frame = 0
Query: 63 LSDISTVNQNSLFATAFVFFLTFWGAISFVKGSTKARITQASFTL--QQSPSDIAKKTARYLMERSFVADPEKDSRAGVMTFTGKVRASSSVASILVAVAASGLWSLTYILNFILPTQYQSPYWNLLTLLAFAVVPWYWNAASRTEEVKVMVEEEEQGS--------------TLYVKGHRDEIEQLEKAFNWKRNA 243
L++++ NQ+SL TAFVF LT WG +SF+KGS K R+TQASFTL SP +A+K + L R++VA PE D R GVMT+ G V+ S+S+A+ILV+VA +GL + + N +LP +Y S W +++L AV PWYW A R E+ K MV+ E G+ TL+VKGHRDE+ E+ KRN+
Sbjct: 68 LAEVTATNQSSLGVTAFVFLLTAWGGLSFIKGSVKDRLTQASFTLPTDTSPDTLARKASAILTGRAYVAKPEMDERPGVMTYEGVVKPSTSIATILVSVAVAGLAGVVLMANLVLPPEYASSKWYAVSVLGAAVGPWYWAKAERAEQFKCMVQVGEGGNEPLAGVPGVPSTGVTLFVKGHRDEVAVFERELGVKRNS 264
BLAST of Gcaud1764.t1 vs. uniprot
Match: A0A5J4Z2N8_PORPP (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z2N8_PORPP) HSP 1 Score: 148 bits (374), Expect = 1.600e-39 Identity = 80/184 (43.48%), Postives = 118/184 (64.13%), Query Frame = 0
Query: 62 LLSDISTVNQNSLFATAFVFFLTFWGAISFVKGSTKARITQASFTLQQSPSDIAKKTARYLMERSFVADPEKDSRAGVMTFTGKVRASSSVASILVAVAASGLWSLTYILNFILPTQYQSPYWNLLTLLAFAVVPWYWNAASRTEEVKVMVEEEE---QGSTLYVKGHRDEIEQLEKAFNWKRN 242
+L + N SL TA V+FLTFWG ISFVKGSTK RI Q +++++ P +A+ A++ R++ + + D+R GV+TF G V S +A +L + A GL SL +LN LP +Y+S YW +T ++ VVPWYW A R E+VK+++EE E + +T+Y+KGHRDEI + E+ + RN
Sbjct: 110 MLGAVDDDNLRSLGITALVWFLTFWGLISFVKGSTKPRIEQHNYSVEGEPGAMARACAQHFASRAYKINAQADTRPGVVTFEGLVSPSYFIAGLLFSCLALGLGSLVVLLNTFLPDEYRSVYWWGITPVSALVVPWYWRGAERIEQVKLLIEEAETPGEPNTVYIKGHRDEIMEFERTLGYVRN 293
BLAST of Gcaud1764.t1 vs. uniprot
Match: A0A8J7AEH6_9CYAN (Cofactor assembly of complex C subunit B n=2 Tax=Romeria TaxID=945765 RepID=A0A8J7AEH6_9CYAN) HSP 1 Score: 79.7 bits (195), Expect = 1.400e-14 Identity = 55/152 (36.18%), Postives = 83/152 (54.61%), Query Frame = 0
Query: 87 GAISFVKGSTKARITQASFTLQQSPSDIAKKTARYLMERSFVADPEKDSRAGVMTFTGKVRASSSVASILVAVAASGLWSLTYILNFILPTQYQSPYWNLLTLLAFAVVPWYWNAASRTEEVKVMVEEEEQ----GSTLYVKGHRDEIEQLE 234
G I F++ STK RI A FT QQ+PSD+ + A +L R++ + S +T G VR S +A L +AA G L +L+ + ++++ +W LL L A + +YW ++R EE+ V + S+L VKGHRDEI QL+
Sbjct: 19 GLIFFIRASTKDRIQTAQFTSQQTPSDLYQTVAHHLQSRAYRLKADATSERETVTLVGFVRPSLFLAVFLTGLAAIGWLCLALVLSTLF-SEWRGLFWGLLGLSPLAGL-FYWRRSARPEEISFRVSPADDLSSAQSSLKVKGHRDEIAQLQ 168
BLAST of Gcaud1764.t1 vs. uniprot
Match: U9VWW4_9CYAN (Uncharacterized protein n=1 Tax=Leptolyngbya sp. Heron Island J TaxID=1385935 RepID=U9VWW4_9CYAN) HSP 1 Score: 70.9 bits (172), Expect = 1.800e-11 Identity = 51/150 (34.00%), Postives = 77/150 (51.33%), Query Frame = 0
Query: 87 GAISFVKGSTKARITQASFTLQQSPSDIAKKTARYLMERSFV---ADPEKDSRAGVMTFTGKVRASSSVASILVAVAASGLWSLTYILNFILPTQYQSPYWNLLTLLAFAVVPWYWNAASRTEEVKVMVEEEEQGSTLYVKGHRDEIEQL 233
G F+K +TK R A F +QSP + +K Y R++ A P+ D +T TG VR S +A L +AA L +L + + Y + ++ L+ L A + YW A R E++ +++ EQG TL V+GHRDE+ QL
Sbjct: 6 GLFFFIKAATKDRTEVAEFLTEQSPDVLHQKLLNYFQNRAYTLASATPDSDDW---ITLTGLVRPSVFLAIFLAFLAAVALMCFALVLTTLF-SGYGALFFILVLLAPVAAIA-YWKQAKREEQIAFRIDDTEQGCTLTVRGHRDELIQL 150
BLAST of Gcaud1764.t1 vs. uniprot
Match: UPI000475110E (cofactor assembly of complex C subunit B n=1 Tax=Spirulina subsalsa TaxID=54311 RepID=UPI000475110E) HSP 1 Score: 62.8 bits (151), Expect = 2.010e-8 Identity = 55/177 (31.07%), Postives = 89/177 (50.28%), Query Frame = 0
Query: 69 VNQNSLFATAFVFFLTFWGAISFVKGSTKARITQASFTLQQSPSDIAKKTARYLMERSF-VADPEKDSRAGVMTFTGKVRASSSVASILVAVAASGLWSLTYILNFILPTQYQSPYWNLLTLLAFAVVPW-YWNAASRTEEVKVMVE---EEEQGSTLYVKGHRDEIEQLEKAFNWK 240
+N + L +T F+ L G F++ S K R Q + + Y +R++ VA +++S+ +TF G VR S +A L +A GL IL+++LP Q +W L+ L V W YW A R E+V + +E E G + V+GHRDE+ +L++A ++K
Sbjct: 1 MNTSVLSSTFFLTLLLMIGLFFFIRASFKDRTEQVQLWSDLPEESLFTQLQCYFDQRAYRVAQVDEESQQ--VTFEGFVRPSWFLAVFLTLLAGCGLVCFALILSYLLP-QLTLLFWGLIALAP--VGGWVYWQKAGRMEQVLLKIEPSPETNPGHFVTVRGHRDELIELQRAMSFK 172
BLAST of Gcaud1764.t1 vs. uniprot
Match: K9STQ9_9SYNE (Uncharacterized protein n=1 Tax=Synechococcus sp. PCC 7502 TaxID=1173263 RepID=K9STQ9_9SYNE) HSP 1 Score: 59.3 bits (142), Expect = 3.670e-7 Identity = 47/162 (29.01%), Postives = 79/162 (48.77%), Query Frame = 0
Query: 87 GAISFVKGSTKARITQASF-TLQQSPSDIAKKTARYLMERSFVADPEKDSRAGVMTFTGKVRASSSVASILVAVAASGLWSLTYILNFILPTQYQSPYW----NLLTLLAFAVVPWYWNAASRTEEVKVMVEEEEQGSTLYVKGHRDEIEQLEKAFNWKRNA 243
G +SF++ S K R T+ ++ + + KT + +R + + R V T G+VR S + +LV VAA G+ L +L ++P + S W + A +YWN A R EE+ + + Q L+VKGH+DE+ +L+++ R A
Sbjct: 21 GLLSFLRSSVKDRTTEMILKSVNFNEDQLLSKTRDHFKQRGYQVIKLEGDRETV-TLAGRVRPSIFLTLVLVVVAAIGMGCLGLVLTILVP--FFSDNWLAIAEIAVFTAIGAGLFYWNGADRIEEISLQLRPNTQ---LWVKGHKDELAELQRSLGLIREA 176
BLAST of Gcaud1764.t1 vs. uniprot
Match: UPI0009E296E4 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1, chloroplastic n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E296E4) HSP 1 Score: 57.4 bits (137), Expect = 4.400e-6 Identity = 48/183 (26.23%), Postives = 86/183 (46.99%), Query Frame = 0
Query: 67 STVNQNSLFATAFVFFLTFWGAISFVKGSTKARITQASFTLQQS-PSDIAKKTARYLMERSFVADPEKDSRAGVMTFTGKVRASSSVASILVAVAASGLWSLTYILNFILPTQYQSPYWNLLTLLAFAVVPWYWNAASRTEEVKVMVEEEEQG--STLYVKGHRDEIEQLEKAFNWKRNAPVY 246
++ +Q S + + +F ++ G S +K S K++I Q +F S P+ +A + + +F D+ +TF G + S A++L L S+ +L+ +P + +W LT L+ +YW ASR EE+KV + + G S + V+G ++EQ+ K VY
Sbjct: 69 ASYSQASYYTSLGLFVISVPGLWSLIKRSVKSKIVQKNFVKGASRPNQVAGEILSFFTRNNFTVSDRGDT----ITFEGMMVPSRGQAALLTFCTCISLASVGLVLSIAVPEGGNNWFW--LTALSPLAGVYYWQRASRKEEIKVKILVGDDGKLSEIIVRGDDQQLEQMRKELQLSEKGMVY 245 The following BLAST results are available for this feature:
BLAST of Gcaud1764.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 10
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud1764.t1 ID=Gcaud1764.t1|Name=Gcaud1764.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=274bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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