Gcaud9460.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud9460.t1
Unique NameGcaud9460.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length184
Homology
BLAST of Gcaud9460.t1 vs. uniprot
Match: A0A2V3IL60_9FLOR (Mitochondrial import inner membrane translocase subunit TIM17-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL60_9FLOR)

HSP 1 Score: 301 bits (771), Expect = 1.730e-102
Identity = 147/178 (82.58%), Postives = 166/178 (93.26%), Query Frame = 0
Query:    1 MNFDVPSEPEGRMVDHQREPCPHRIIDDFGGAFAMGAIGGTIWHFIKGARNSPNGARLIGAIDAVKVRAPALGGSFAVWGGLFSSFDCTLQAIRKKEDPWNTISSGALTGGLLSSRSGLRAAGKNAIVGGVLLALIEGASIVITRYASQQALSPEEIQKLREEMERAQAKQRNEGLGA 178
            MNFD P EP+ R+V+HQREPCPHRIIDD GGAF MGAIGGTIWHF+KGA+NSPNGARLIGAIDAVKVRAPALGGSFAVWGGLFS+FDCTLQ IR+KEDPWN+I+SGALTGG+L+SRSGLR AGK+AI GG+LLALIEGASIVITRY SQQ +SPEE+QKLR+EMERAQAKQ+++ L A
Sbjct:    1 MNFDAPPEPDSRLVEHQREPCPHRIIDDVGGAFGMGAIGGTIWHFLKGAKNSPNGARLIGAIDAVKVRAPALGGSFAVWGGLFSTFDCTLQGIRRKEDPWNSIASGALTGGVLASRSGLRTAGKSAIFGGILLALIEGASIVITRYTSQQNMSPEEMQKLRDEMERAQAKQQSQRLAA 178          
BLAST of Gcaud9460.t1 vs. uniprot
Match: R7QSY8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSY8_CHOCR)

HSP 1 Score: 253 bits (645), Expect = 2.050e-83
Identity = 130/178 (73.03%), Postives = 151/178 (84.83%), Query Frame = 0
Query:    1 MNFDVPSEPEGRMVDHQREPCPHRIIDDFGGAFAMGAIGGTIWHFIKGARNSPNGARLIGAIDAVKVRAPALGGSFAVWGGLFSSFDCTLQAIRKKEDPWNTISSGALTGGLLSSRSGLRAAGKNAIVGGVLLALIEGASIVITRYASQQALSPEEIQKLREEMERAQAKQRNEGLGA 178
            M+F+ P+      V+HQREPCPHRIIDD GGAF MGAIGG+IWHF+KGARNSP GAR IGAIDAVKVRAPALGGSFAVWGGLFS+FDC+LQ IR KEDPWN+I+SGALTGG+L+SRSG+RAAGK+A VGGVLLALIEG SI ITRY S +  +P+EI K+REEME+ + +   EGL A
Sbjct:    1 MDFEAPAP----SVEHQREPCPHRIIDDVGGAFGMGAIGGSIWHFLKGARNSPQGARFIGAIDAVKVRAPALGGSFAVWGGLFSTFDCSLQGIRGKEDPWNSIASGALTGGVLASRSGMRAAGKSAAVGGVLLALIEGISIAITRYGSSRP-APQEISKMREEMEKQRGR---EGLAA 170          
BLAST of Gcaud9460.t1 vs. uniprot
Match: A0A7J7ILM9_9RHOD (Mitochondrial import inner membrane translocase subunit Tim17-A n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ILM9_9RHOD)

HSP 1 Score: 221 bits (563), Expect = 4.070e-70
Identity = 103/169 (60.95%), Postives = 135/169 (79.88%), Query Frame = 0
Query:    7 SEPEGRMVDHQREPCPHRIIDDFGGAFAMGAIGGTIWHFIKGARNSPNGARLIGAIDAVKVRAPALGGSFAVWGGLFSSFDCTLQAIRKKEDPWNTISSGALTGGLLSSRSGLRAAGKNAIVGGVLLALIEGASIVITRYASQQALSPEEIQKLREEMERAQAKQRNEG 175
            + P    ++H REPCP RI+DD GGAF MGAIGG+IWHF+KG RNSP G RL+G +DAVK+RAPALGGSFAVWGGLFS+FDC +  +R  EDP+N I+SGA+TGG+LS+RSGLRA+ ++A++GGVLLA+IEG  I++TR  ++   +PEE+++LR E    Q +QR EG
Sbjct:    2 ASPGSATIEHAREPCPDRILDDVGGAFCMGAIGGSIWHFVKGMRNSPRGQRLLGGVDAVKLRAPALGGSFAVWGGLFSTFDCAIGGLRGVEDPYNAIASGAITGGVLSARSGLRASARSALIGGVLLAIIEGLGIMLTRMTAEMGPTPEEVERLRREFAEQQQRQRLEG 170          
BLAST of Gcaud9460.t1 vs. uniprot
Match: M2W594_GALSU (Mitochondrial protein translocase, MPT family n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W594_GALSU)

HSP 1 Score: 218 bits (556), Expect = 1.570e-69
Identity = 102/155 (65.81%), Postives = 128/155 (82.58%), Query Frame = 0
Query:   14 VDHQREPCPHRIIDDFGGAFAMGAIGGTIWHFIKGARNSPNGARLIGAIDAVKVRAPALGGSFAVWGGLFSSFDCTLQAIRKKEDPWNTISSGALTGGLLSSRSGLRAAGKNAIVGGVLLALIEGASIVITRYASQQALSPEEIQKLREEMERAQ 168
            V+H REPCPHRI+DD GGA+AMG+IGG +WHF KGARNSP GARL GA+DAVK+R+P LGG+FAVWGGLFS+FDC L  IR KEDPWN I SGA+TGG+L++RSG+  A ++A +GG+LLALIEG  I++TR  +    SPEEI+K++ EM+R Q
Sbjct:    4 VEHNREPCPHRILDDIGGAYAMGSIGGALWHFFKGARNSPKGARLRGAVDAVKLRSPVLGGNFAVWGGLFSTFDCALAGIRHKEDPWNAIMSGAITGGVLAARSGVGGATRSAAIGGILLALIEGMGILLTRMTADLGPSPEEIEKMQAEMQRQQ 158          
BLAST of Gcaud9460.t1 vs. uniprot
Match: A0A7S3ENQ2_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ENQ2_9RHOD)

HSP 1 Score: 217 bits (552), Expect = 3.200e-69
Identity = 105/151 (69.54%), Postives = 127/151 (84.11%), Query Frame = 0
Query:   14 VDHQREPCPHRIIDDFGGAFAMGAIGGTIWHFIKGARNSPNGARLIGAIDAVKVRAPALGGSFAVWGGLFSSFDCTLQAIRKKEDPWNTISSGALTGGLLSSRSGLRAAGKNAIVGGVLLALIEGASIVITRYASQQALSPEEIQKLREEM 164
            V+H R+PCP RI+DD GGAF MGAIGG+IWHF KGARNSP G R +GAIDAVKV+ PALGGSFAVWGG+FSSFDC L  +R KEDPWN+I+SGA+TGG+L++RSG  A  K+A VGG+LLALIEG +I +TR ++  A SPEEIQK+R+EM
Sbjct:    5 VEHVRDPCPDRILDDVGGAFGMGAIGGSIWHFFKGARNSPRGQRFLGAIDAVKVKGPALGGSFAVWGGVFSSFDCLLVGVRGKEDPWNSIASGAITGGVLAARSGPSAMAKSAAVGGLLLALIEGMAIGLTRMSNSLAPSPEEIQKMRQEM 155          
BLAST of Gcaud9460.t1 vs. uniprot
Match: M1VM69_CYAM1 (Mitochondrial presequence translocase subunit Tim17 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VM69_CYAM1)

HSP 1 Score: 217 bits (552), Expect = 1.960e-68
Identity = 101/162 (62.35%), Postives = 133/162 (82.10%), Query Frame = 0
Query:   14 VDHQREPCPHRIIDDFGGAFAMGAIGGTIWHFIKGARNSPNGARLIGAIDAVKVRAPALGGSFAVWGGLFSSFDCTLQAIRKKEDPWNTISSGALTGGLLSSRSGLRAAGKNAIVGGVLLALIEGASIVITRYASQQALSPEEIQKLREEMERAQAKQRNEG 175
            ++H REPCP RI+DD GGAF MGAIGG+IWHF+KG RNSP G RL+G+IDAVK+RAP LGGSFAVWGGLFS+FDC +  +R  EDP+N I+SGA+TGG+LS+RSGLRA+ ++A++GGVLLA+IEG  I++TR  ++   +PEE++++R E    Q +QR EG
Sbjct:    9 IEHAREPCPDRILDDVGGAFCMGAIGGSIWHFVKGMRNSPRGQRLLGSIDAVKLRAPTLGGSFAVWGGLFSTFDCAIGGLRGVEDPYNAIASGAITGGVLSARSGLRASARSALIGGVLLAIIEGLGIMLTRMTAEMGPTPEEVERMRREFAEQQHRQRLEG 170          
BLAST of Gcaud9460.t1 vs. uniprot
Match: A0A5J4YVM8_PORPP (Mitochondrial import inner membrane translocase subunit TIM17-2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVM8_PORPP)

HSP 1 Score: 210 bits (534), Expect = 2.260e-66
Identity = 102/161 (63.35%), Postives = 125/161 (77.64%), Query Frame = 0
Query:   14 VDHQREPCPHRIIDDFGGAFAMGAIGGTIWHFIKGARNSPNGARLIGAIDAVKVRAPALGGSFAVWGGLFSSFDCTLQAIRKKEDPWNTISSGALTGGLLSSRSGLRAAGKNAIVGGVLLALIEGASIVITRYASQQALSPEEIQKLREEMERAQAKQRNE 174
            V H REPCP RI+DD GGAFAMG  GG+IWHF KG RNSP GAR  GAID VK+ APALG SFAVWGGLFS+FDC L A+R KEDPWN+I+SGA+TGG+L+ R+G RAA K A++GGV LA+IEG  I +TR  +    +PEE+Q++++EM   Q KQ+ E
Sbjct:    5 VGHTREPCPDRILDDVGGAFAMGLGGGSIWHFFKGLRNSPRGARFAGAIDNVKISAPALGSSFAVWGGLFSTFDCCLVALRGKEDPWNSIASGAITGGVLAMRAGPRAAAKQAVIGGVFLAVIEGCGIALTRMTADMGPNPEELQQMQQEMAELQRKQQRE 165          
BLAST of Gcaud9460.t1 vs. uniprot
Match: A0A2P6VS00_9CHLO (Mitochondrial import inner membrane translocase subunit TIM17-2-like n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VS00_9CHLO)

HSP 1 Score: 198 bits (504), Expect = 4.210e-61
Identity = 90/135 (66.67%), Postives = 113/135 (83.70%), Query Frame = 0
Query:   11 GRMVDHQREPCPHRIIDDFGGAFAMGAIGGTIWHFIKGARNSPNGARLIGAIDAVKVRAPALGGSFAVWGGLFSSFDCTLQAIRKKEDPWNTISSGALTGGLLSSRSGLRAAGKNAIVGGVLLALIEGASIVITR 145
            G  VDH REPCP RI+DD GGAF MGA+GG +WH +KG +NSP+G R +G IDA++  AP +GGSFAVWGGLFS+FDCTL A+RKKEDPWN+I++GALTGG L  R+GL++AGK+A+ GGVLLA+IEG  I++TR
Sbjct:    5 GPPVDHGREPCPDRILDDVGGAFGMGAVGGGMWHLLKGMKNSPSGHRFVGGIDAIRREAPRIGGSFAVWGGLFSTFDCTLVALRKKEDPWNSIAAGALTGGFLQLRTGLKSAGKSAVFGGVLLAMIEGVGILLTR 139          
BLAST of Gcaud9460.t1 vs. uniprot
Match: A0A7S0I5F5_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I5F5_9EUKA)

HSP 1 Score: 196 bits (498), Expect = 5.480e-61
Identity = 93/142 (65.49%), Postives = 114/142 (80.28%), Query Frame = 0
Query:   13 MVDHQREPCPHRIIDDFGGAFAMGAIGGTIWHFIKGARNSPNGARLIGAIDAVKVRAPALGGSFAVWGGLFSSFDCTLQAIRKKEDPWNTISSGALTGGLLSSRSGLRAAGKNAIVGGVLLALIEGASIVITRYASQQALSP 154
            M   +R+PCPHRI DD GGAFAMGAIGG +W+ +KGARNSP G RL+G++ AVK RAP +GG+FAVWGGLFSSFDCTL AIRKKEDPWN+I SGA TGG+L++R G RAA ++A VGGVLLA+IEG +I +T+  +     P
Sbjct:    1 MSVQERDPCPHRIFDDIGGAFAMGAIGGGVWNSVKGARNSPRGERLLGSVTAVKARAPVMGGNFAVWGGLFSSFDCTLVAIRKKEDPWNSIISGAATGGVLAARGGWRAASRSAAVGGVLLAMIEGLNIFLTKMMADTTPPP 142          
BLAST of Gcaud9460.t1 vs. uniprot
Match: A0A5J4XNJ1_9CHLO (Mitochondrial inner membrane translocase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XNJ1_9CHLO)

HSP 1 Score: 198 bits (504), Expect = 5.550e-61
Identity = 92/139 (66.19%), Postives = 114/139 (82.01%), Query Frame = 0
Query:    7 SEPEGRMVDHQREPCPHRIIDDFGGAFAMGAIGGTIWHFIKGARNSPNGARLIGAIDAVKVRAPALGGSFAVWGGLFSSFDCTLQAIRKKEDPWNTISSGALTGGLLSSRSGLRAAGKNAIVGGVLLALIEGASIVITR 145
            ++P G  VDH REPCP RI+DD GGAF MGA+GG IWH IKGA+NSP+GAR  G I+A++  AP +GGSFAVWGGLFSSFDCTL A+RKKEDPWN+I++GALTGG L  R+G R+A ++A  GG+LLA+IEG  I++TR
Sbjct:    2 AQPGGGSVDHGREPCPDRILDDIGGAFGMGAVGGGIWHLIKGAKNSPSGARTRGGIEAIRREAPRIGGSFAVWGGLFSSFDCTLVALRKKEDPWNSIAAGALTGGFLQLRTGPRSAARSAAFGGILLAMIEGLGILLTR 140          
The following BLAST results are available for this feature:
BLAST of Gcaud9460.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IL60_9FLOR1.730e-10282.58Mitochondrial import inner membrane translocase su... [more]
R7QSY8_CHOCR2.050e-8373.03Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7J7ILM9_9RHOD4.070e-7060.95Mitochondrial import inner membrane translocase su... [more]
M2W594_GALSU1.570e-6965.81Mitochondrial protein translocase, MPT family n=1 ... [more]
A0A7S3ENQ2_9RHOD3.200e-6969.54Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
M1VM69_CYAM11.960e-6862.35Mitochondrial presequence translocase subunit Tim1... [more]
A0A5J4YVM8_PORPP2.260e-6663.35Mitochondrial import inner membrane translocase su... [more]
A0A2P6VS00_9CHLO4.210e-6166.67Mitochondrial import inner membrane translocase su... [more]
A0A7S0I5F5_9EUKA5.480e-6165.49Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A5J4XNJ1_9CHLO5.550e-6166.19Mitochondrial inner membrane translocase n=1 Tax=T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 26..132
e-value: 2.1E-30
score: 105.4
NoneNo IPR availablePANTHERPTHR10485MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM-17coord: 13..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_258_length_33686_cov_5.184015contigNODE_258_length_33686_cov_5.184015:27389..28105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud9460.t1Gcaud9460.t1Gracilaria caudata M_176_S67 malemRNANODE_258_length_33686_cov_5.184015 27389..28105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud9460.t1 ID=Gcaud9460.t1|Name=Gcaud9460.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=184bp
MNFDVPSEPEGRMVDHQREPCPHRIIDDFGGAFAMGAIGGTIWHFIKGAR
NSPNGARLIGAIDAVKVRAPALGGSFAVWGGLFSSFDCTLQAIRKKEDPW
NTISSGALTGGLLSSRSGLRAAGKNAIVGGVLLALIEGASIVITRYASQQ
ALSPEEIQKLREEMERAQAKQRNEGLGAIGQLS*
back to top