Gcaud2067.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2067.t1
Unique NameGcaud2067.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length71
Homology
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BLAST of Gcaud2067.t1 vs. uniprot
Match: A0A2V3IYU3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYU3_9FLOR)

HSP 1 Score: 120 bits (302), Expect = 3.830e-31
Identity = 54/65 (83.08%), Postives = 61/65 (93.85%), Query Frame = 0 
Query:    1 MYNIALPLPNPGRAHRFCQACDHINHVRRKLCENCGAPKPSALRSAIGVSNAKSPAPPIRKASRQ 65
            MYN+ALPLPNPGRAHRFCQ CDHINHVRRKLCENCGAPKPSALR+A+  ++A+SPAPPIRK +RQ
Sbjct:   93 MYNLALPLPNPGRAHRFCQVCDHINHVRRKLCENCGAPKPSALRNAMTATSARSPAPPIRKPARQ 157
The following BLAST results are available for this feature:
BLAST of Gcaud2067.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IYU3_9FLOR3.830e-3183.08Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.380coord: 9..67
e-value: 4.9E-5
score: 25.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2544_length_5360_cov_3.485481contigNODE_2544_length_5360_cov_3.485481:797..1122 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2067.t1Gcaud2067.t1Gracilaria caudata M_176_S67 malemRNANODE_2544_length_5360_cov_3.485481 797..1122 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2067.t1 ID=Gcaud2067.t1|Name=Gcaud2067.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=71bp
MYNIALPLPNPGRAHRFCQACDHINHVRRKLCENCGAPKPSALRSAIGVS
NAKSPAPPIRKASRQSVSNVA
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