Gcaud3024.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3024.t1
Unique NameGcaud3024.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length581
Homology
BLAST of Gcaud3024.t1 vs. uniprot
Match: A0A2V3J545_9FLOR (ATP-dependent DNA helicase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J545_9FLOR)

HSP 1 Score: 716 bits (1849), Expect = 9.130e-255
Identity = 376/498 (75.50%), Postives = 425/498 (85.34%), Query Frame = 0
Query:   80 MHNQVASMRARRISASMLSSAESLSHNRQVIASLHRNHIPFALLYITPEKLTSPSFLQVLDKLYRNRKLALVAVDEAHCISEWGHDFRKAYANLGVVKSKFPTVPVVALTATATPFVQKHILRSLCIPRAEHVRASFLRSNVRYQVRYVHTLQTAVELDIISYVLRRRNVDQSFQTGIVYAFKRSTVDVVADLLKTNGVPALSYHAGLSTKARKAAQHKFERGECPVVVASTAFGMGIDVSAIRYVIHHSIPKSLEAFYQESGRAGRDGKPCDSIVYYSDRDVELYQFLNRQGNADEHLVESRQEKLKGVQDYCTKLRCRRVALLEYFGEKASASKICGRHGCDVCCDIKDVRRRMAIRVANHAAKSGSSRPSNSVSTPAADFQSARSMLKQQRDKALAAK---SAEAIDDFSEEEHDPEVRQAVKDIDIG-SDDDIDFEALKRAEKAHERKRLNKLKRPRDRIMNKLGLQT--AQEASASGSVSKRRKSIQSKVIFG 571
            MHNQVA++RA  I A+MLSSAE  SHNRQV+++LH   IP+ALLYITPEKLTS SF+ VL +L   RKLALVAVDEAHCISEWGHDFRKAYANLG +K+ FP +PVVALTATATP VQKHI++SL IP A+HVR SFLRSNVRYQVRYV TLQTAVELDIISYVLRRRN D SF+TGIVYAFKR+TVD+VADLL TNGVPALSYHAGLS+KARKAAQ KFE GECPVVVASTAFGMGIDVS IRYVIHHSIPKSLEAFYQESGRAGRDGKPCDSI+YY+ RD+ELY+FLN Q  AD+ L+ESR  KL+ V+DYCTKLRCRRV LLEYFGEKASA  +CGRHGCDVC DI DVR RMAI + +H  K  SSR   +VSTPAADFQSARSMLKQQR++ LA K   S +AID+FS +E+DPEV+QAVK I +G SDDDIDF AL +AEKA ER+RLN+LKRPRDRI+NKLG+++     ASA  S+ KRRKS+QSK+ FG
Sbjct:    1 MHNQVAALRAASIPATMLSSAEPPSHNRQVLSALHAARIPYALLYITPEKLTSSSFVPVLRRLDAKRKLALVAVDEAHCISEWGHDFRKAYANLGFLKTSFPRIPVVALTATATPSVQKHIVKSLSIPNAKHVRTSFLRSNVRYQVRYVDTLQTAVELDIISYVLRRRNPDSSFETGIVYAFKRTTVDIVADLLNTNGVPALSYHAGLSSKARKAAQQKFESGECPVVVASTAFGMGIDVSNIRYVIHHSIPKSLEAFYQESGRAGRDGKPCDSILYYAQRDIELYRFLNSQDKADQQLIESRTNKLQSVRDYCTKLRCRRVVLLEYFGEKASAKSVCGRHGCDVCYDINDVRDRMAIHIRSHTTKRPSSRRRPTVSTPAADFQSARSMLKQQRERELAEKKQKSDDAIDEFSGDENDPEVKQAVKSIQLGGSDDDIDFVALAKAEKAQERQRLNRLKRPRDRILNKLGMKSDAGGSASAPSSLPKRRKSLQSKIGFG 498          
BLAST of Gcaud3024.t1 vs. uniprot
Match: R7Q4Y6_CHOCR (ATP-dependent DNA helicase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4Y6_CHOCR)

HSP 1 Score: 462 bits (1190), Expect = 1.620e-153
Identity = 263/536 (49.07%), Postives = 362/536 (67.54%), Query Frame = 0
Query:   17 KHFGFDALRPNQAVTVRHLLAQRDVLVIAPTGSGKSLTFQLPALYLHRRFNRLTLVVTPLLSLMHNQVASMRARRISASMLSSAESLSHNRQVIASLH-RNHIPFALLYITPEKLTSPSFLQVLDKLYRNRKLALVAVDEAHCISEWGHDFRKAYANLGVVKSKFPTVPVVALTATATPFVQKHILRSLCIPRAEHVRASFLRSNVRYQVRYVHTLQTAVELDIISYVLRRRNVDQSFQTGIVYAFKRSTVDVVADLLKTNGVPALSYHAGLSTKARKAAQHKFERGECPVVVASTAFGMGIDVSAIRYVIHHSIPKSLEAFYQESGRAGRDGKPCDSIVYYSDRDVELYQFLN--RQGNADEHLVESRQEKLKGVQDYCTKLRCRRVALLEYFGEKASASKICGRHGCDVCCDIKDVRRR-----MAIRVANHAAKSGSSRPSNSVSTPAADFQSARSMLK-QQRDKALAAKSAEA--------------IDDFSE-EEHDPEVRQAVKDIDIGSDDDIDFEALKRAEKAHERKR 528
            K+FG  +LRP QA  +  LL+ +DVL+ APTG GKSL FQLPAL  H     ++LVV+PLL+LM+NQV ++ AR +  ++LSSAE+++ NR+V+ +L  R  IPFA+LYITPE+L   SF+ +L +L+   KL ++A+DEAHCIS+WGHDFR AY+ +GV++  FPT+P+VALTATAT  V+  I+ SL IP A H+  SFLR+N+RY+VRY  T++T V  D+                       R TV+ +  LL++ GVPA+ YH G+S   RK AQH FE G+ PV VAS AFGMGIDV+ IRYV+HHS+PKS+EAFYQESGRAGRDG P +S++YYS +D+EL ++L    +  +DE  +++  +  K +++YCT ++CRRVALLEYFGE+ASA+K+CGR  CDVC D KDV+RR     + + V   A KS SSRPS    TPAADFQ+ARSM++ QQR +  A + AE               I DFS  +E   + R  ++ +    +  ID  A+++AE+A+E+KR
Sbjct:   19 KYFGPLSLRPQQAPVISALLSGQDVLLTAPTGHGKSLCFQLPALVHHEVSGAVSLVVSPLLALMNNQVTALLARGVPTALLSSAETVAANRKVLTALDTRGAIPFAMLYITPERLVKGSFMSLLRRLHHRGKLGILAIDEAHCISQWGHDFRTAYSRMGVIRDDFPTLPIVALTATATAKVRADIISSLHIPNARHIHTSFLRANIRYEVRYADTMETDVSEDL-----------------------RVTVEDLTVLLQSAGVPAVGYHGGMSAGKRKEAQHLFETGQRPVAVASIAFGMGIDVAGIRYVVHHSLPKSVEAFYQESGRAGRDGLPSESVLYYSKKDLELNEYLLACHRKKSDEKRMQAAVKAQKAMKEYCTNVKCRRVALLEYFGEEASAAKVCGRSWCDVCFDPKDVKRRKRRTQINLSVPPRAIKSASSRPS----TPAADFQTARSMMQSQQRTQKAAEEQAEVQRARKPRSHIISDDIADFSSGDEICVDDRAKLEKLKTSKNFVIDLIAIEKAEEAYEKKR 527          
BLAST of Gcaud3024.t1 vs. uniprot
Match: A0A7S0ZH59_9RHOD (ATP-dependent DNA helicase n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZH59_9RHOD)

HSP 1 Score: 322 bits (826), Expect = 2.500e-99
Identity = 184/441 (41.72%), Postives = 270/441 (61.22%), Query Frame = 0
Query:    8 DELLTELVAKHFGFDALRPNQAVTVRHLLAQRDVLVIAPTGSGKSLTFQLPALYLHRRFNRLTLVVTPLLSLMHNQVASMRARRISASMLSSAESLSHNRQVIASLHR------NHIPFALLYITPEKLTSPSFLQVLDKLYRNRKLALVAVDEAHCISEWGHDFRKAYANLGVVKSKFPTVPVVALTATATPFVQKHILRSLCIPRAEHVRASFLRSNVRYQVRYVHTLQTAVELD----IISYVLRRRNVDQSFQTGIVYAFKRSTVDVVADLLKTNGVPALSYHAGLSTKARKAAQHKFERGECPVVVASTAFGMGIDVSAIRYVIHHSIPKSLEAFYQESGRAGRDGKPCDSIVYYSDRDVELYQFLNRQGN-ADEHLVESRQEKLKGVQDYCTKLRCRRVALLEYFGEKASASKI-CG-RHGCDVCCDIKDVRRRM 435
            D L+  ++   FG   LRP Q   +  LL+  DVL IAPTG GKSL +QLPA+ L +  + +++V++PLL+L+ NQ+ ++ AR+I+++ +SS++S +HNR V  SL +      N IP+A++Y+TPE + SP FL VL+KL   RK+ + AVDEAHCIS WGHDFR  Y  LG +K  FP VP++A TATAT  V++ I   L I  A+ V  SF RSN+RY+ +YV  L  AV+ +    I+ +V  RR      Q GIVYA  R  V++++ +L +  V   +YH G+S   R + Q++++ GE  V+VA+ AFGMG+D   +RYV++  +P S+E FYQ+SGRAGRDG P  SI+ +S  D+    FL   G+   E   ++    L+G++      +CRR  +L +FGE     +  C    GCD C D    R+ +
Sbjct:   16 DSLIESVLDSAFGLQELRPGQREVIDGLLSGHDVLFIAPTGGGKSLCYQLPAVILAKTHDAVSIVISPLLALVQNQLDALHARQIASTSISSSQSAAHNRSVFESLSKATANTMNSIPYAIIYVTPETVLSPRFLSVLNKLSAKRKIGIFAVDEAHCISSWGHDFRAKYRQLGELKRLFPNVPILAATATATAKVRQDIQFQLGISDAKLVTRSFNRSNIRYEFKYV--LSNAVDDERRKIIVDFVCARRQ-----QCGIVYARTRELVEMISMVLSSKKVSCGAYHGGMSNPDRLSIQNRWQSGELKVIVATLAFGMGVDKDDVRYVLNADLPASIEGFYQQSGRAGRDGLPALSILIFSLSDLRKLVFLVENGSYKHESTRKAAMHALEGMKGLAMHPKCRRKMILRHFGEALGPPEPECSISAGCDACSDPNRARQNV 449          
BLAST of Gcaud3024.t1 vs. uniprot
Match: A0A5J4YN59_PORPP (ATP-dependent DNA helicase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YN59_PORPP)

HSP 1 Score: 323 bits (829), Expect = 3.490e-99
Identity = 191/444 (43.02%), Postives = 275/444 (61.94%), Query Frame = 0
Query:    8 DELLTELVAKHFGFDALRPNQAVTVRHLLAQRDVLVIAPTGSGKSLTFQLPALYLHRRFNRLTLVVTPLLSLMHNQVASMRARRISASMLSSAESLSHNRQVIASLHR----NHIPFALLYITPEKLTSPSFLQVLDKLYRNRKLALVAVDEAHCISEWGHDFRKAYANLGVVKSKFPTVPVVALTATATPFVQKHILRSLCIPRAEHVRASFLRSNVRYQVRYVHTLQTAVELDIISYVLRRRNVDQSFQT-----GIVYAFKRSTVDVVADLLKTNGVPALSYHAGLSTKARKAAQHKFERGECPVVVASTAFGMGIDVSAIRYVIHHSIPKSLEAFYQESGRAGRDGKPCDSIVYYSDRDVELYQFLNRQGNADEHLVES-RQEKLKGVQ---DYCTKLRCRRVALLEYFGEKASASKICGRH--GCDVCCDIKDVRRRMA 436
            DE +  +++  F    LRP Q   +R +L +RDV V+APTG GKSLT+QLPA+ LH  + +L +VV+PLL+LM NQ+ ++ A +I A+ +SS+++ + N+ V   L         P ALLY+TPE + +  F ++L +L     LAL+AVDEAHCIS+WGHDFR  Y  LG  K  FP VPV+A+TATA+  VQK I+  L I  A  V  SF R N+RY+VRY+   +   EL +   ++R  +V ++ +      GIVYA  R+TV+++A  L+  GV   +YHAG+STK R   Q +++ GE  VVVA+ AFGMG+D   +R+VIH  IP SLEAFYQ+SGRAGRDG    S+++++  D +   +L +      + VE+ R   L+G Q   DY    +CRR  +L++FGEK SA +   +   GCD C +   V  R++
Sbjct:   65 DEQVRSVLSSSFRLTELRPAQEEAIRGVLQRRDVFVLAPTGGGKSLTYQLPAVLLHHLYGKLAIVVSPLLALMRNQLDALAALKIPATSVSSSQTAAQNKDVYVMLDAAAGGGKCPVALLYVTPETMATDKFHRILKRLDARGLLALLAVDEAHCISDWGHDFRTKYRELGTFKLAFPQVPVLAVTATASAKVQKDIVEQLNILDALVVCRSFNRRNIRYEVRYL-VPEDVAELGVE--LVREASVTKAVRRLSGLCGIVYARTRATVELLASALQMQGVSVGAYHAGVSTKDRLLVQQRWQSGEILVVVATLAFGMGVDKHDVRFVIHADIPSSLEAFYQQSGRAGRDGAKSLSVLFFAQDDAQKVNYLLQ---TQTYSVETQRSASLRGFQEMVDYACMPKCRRALVLKHFGEKLSAPEPACKDSAGCDYCMNPAKVEERLS 502          
BLAST of Gcaud3024.t1 vs. uniprot
Match: A0A554I757_9BACT (ATP-dependent DNA helicase RecQ n=1 Tax=Parcubacteria group bacterium LiPW_41 TaxID=2017206 RepID=A0A554I757_9BACT)

HSP 1 Score: 311 bits (796), Expect = 2.960e-97
Identity = 171/409 (41.81%), Postives = 252/409 (61.61%), Query Frame = 0
Query:   18 HFGFDALRPNQAVTVRHLLAQRDVLVIAPTGSGKSLTFQLPALYLHRRFNRLTLVVTPLLSLMHNQVASMRARRISASMLSSAESLSHNRQVIASLHRNHIPFALLYITPEKLTSPSFLQVLDKLYRNRKLALVAVDEAHCISEWGHDFRKAYANLGVVKSKFPTVPVVALTATATPFVQKHILRSLCIPRAEHVRASFLRSNVRYQVRYVHTLQTAVELDIISYVLRRRNVDQSFQTGIVYAFKRSTVDVVADLLKTNGVPALSYHAGLSTKARKAAQHKFERGECPVVVASTAFGMGIDVSAIRYVIHHSIPKSLEAFYQESGRAGRDGKPCDSIVYYSDRDVELYQ-FLNRQGNADEHLVESRQEKLKGVQDYCTKLRCRRVALLEYFGEKASASKICGRHGCDVC 425
            HFG+D  RP+Q   +R +L  +D + + PTG+GKSL +QLPA+     F  +T+VV+PL++LM +QV +++   + A+ L+S+      R V+ ++ +  +   LLY+ PE+L  P FL  +      R ++L+A+DEAHCISEWGHDFR  Y NL  ++  +  VPV+ALTATAT  V++ I+R L       V  SF R N+ Y++R     +     D++ Y+ R +       +GI+Y   R++ + VA+ L  +GV AL YHAGL+TK R A Q  F RG   V+ A+ AFGMGID S IR+V H+ +PK++E +YQE+GRAGRDGKP + I++YS RD+  +Q F+++  N     V   Q  L  +  +CT  RCRR  +L+YFGE+   S  CG  GCD+C
Sbjct:   11 HFGYDTFRPHQEEVIRSILEGKDTMALLPTGAGKSLCYQLPAMM----FPGITVVVSPLIALMKDQVGALKTAGLPAAYLNSSMGKKEERLVMNAIDKKEVK--LLYVAPERLLKPDFLGFMA----GRDISLIAIDEAHCISEWGHDFRPEYRNLYTIRQHWSGVPVIALTATATRKVREDIVRQLAFSGHTSVTGSFNRPNLYYEIR----AKDNAFYDMLDYLERNKK-----HSGIIYCHSRASAERVAEELTRDGVEALPYHAGLTTKERTANQELFMRGGVRVITATIAFGMGIDKSDIRFVFHYDLPKNIEGYYQETGRAGRDGKPSNCILFYSPRDLMKHQYFIDQMANRGRAAVCEAQ--LNAISTFCTSYRCRRGMMLQYFGEQPKLSN-CG--GCDIC 395          
BLAST of Gcaud3024.t1 vs. uniprot
Match: A0A419G9A4_9BACT (ATP-dependent DNA helicase RecQ n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=A0A419G9A4_9BACT)

HSP 1 Score: 310 bits (793), Expect = 8.290e-97
Identity = 170/416 (40.87%), Postives = 253/416 (60.82%), Query Frame = 0
Query:   11 LTELVAKHFGFDALRPNQAVTVRHLLAQRDVLVIAPTGSGKSLTFQLPALYLHRRFNRLTLVVTPLLSLMHNQVASMRARRISASMLSSAESLSHNRQVIASLHRNHIPFALLYITPEKLTSPSFLQVLDKLYRNRKLALVAVDEAHCISEWGHDFRKAYANLGVVKSKFPTVPVVALTATATPFVQKHILRSLCIPRAEHVRASFLRSNVRYQVRYVHTLQTAVELDIISYVLRRRNVDQSFQTGIVYAFKRSTVDVVADLLKTNGVPALSYHAGLSTKARKAAQHKFERGECPVVVASTAFGMGIDVSAIRYVIHHSIPKSLEAFYQESGRAGRDGKPCDSIVYYSDRDVELYQ-FLNRQGNADEHLVESRQEKLKGVQDYCTKLRCRRVALLEYFGEKASASKICGRHGCDVC 425
            L + + +HFG+D  RP+Q   +R +L   D L + PTG GKSL +QLPA+     F  +T+VV+PL+SLM +QV S++   + A+ L+S+      R V++++  N +   LLY+ PE+L  P FL  +     ++ ++L+A+DEAHCISEWGHDFR  Y NL  ++  +  VPV+ALTATAT  V++ I+R L          SF R N+ Y++R     +     DI+ Y+ R +       +GI+Y   R++ + VA  L  +G+ AL YHAGL+TK R   Q  F  G   V+ A+ AFGMGID   IR+V H+ +PK++E +YQE+GRAGRDGKP D I++YS RD+  +Q F+++  N   H     + +L+ +  +CT  RCRR  +L+YFGE+  +S  CG   CD+C
Sbjct:    4 LKKQLKEHFGYDTFRPHQEEIIRSILNGNDTLALLPTGGGKSLCYQLPAMM----FQGMTVVVSPLISLMKDQVMSLKKINLPAAFLNSSIGKKEERLVMSAVDNNEVK--LLYVAPERLMKPDFLGFMA----DKNISLIAIDEAHCISEWGHDFRPEYRNLYTIRQHWSGVPVIALTATATRKVREDIVRQLAFSGHGSFTGSFDRPNLYYEMR----AKDNAYYDIVDYIERHKK-----SSGIIYCHSRASAERVAQDLTADGIDALPYHAGLTTKERAHHQELFMNGGVRVITATIAFGMGIDKPDIRFVFHYDLPKNIEGYYQETGRAGRDGKPSDCILFYSPRDLMKHQYFIDKMENR--HRAAVCESQLRAIATFCTSYRCRRAMMLQYFGEQPKSSN-CGN--CDIC 395          
BLAST of Gcaud3024.t1 vs. uniprot
Match: A0A2I0NNN3_9EURY (Recombinase RecQ n=1 Tax=Methanomicrobiales archaeon HGW-Methanomicrobiales-6 TaxID=2013822 RepID=A0A2I0NNN3_9EURY)

HSP 1 Score: 305 bits (780), Expect = 1.300e-94
Identity = 177/412 (42.96%), Postives = 246/412 (59.71%), Query Frame = 0
Query:   14 LVAKHFGFDALRPNQAVTVRHLLAQRDVLVIAPTGSGKSLTFQLPALYLHRRFNRLTLVVTPLLSLMHNQVASMRARRISASMLSSAESLSHNRQVIASLHRNHIPFALLYITPEKLTSPSFLQVLDKLYRNRKLALVAVDEAHCISEWGHDFRKAYANLGVVKSKFPTVPVVALTATATPFVQKHILRSLCIPRAEHVRASFLRSNVRYQVRYVHTLQTAVELDIISYVLRRRNVDQSFQTGIVYAFKRSTVDVVADLLKTNGVPALSYHAGLSTKARKAAQHKFERGECPVVVASTAFGMGIDVSAIRYVIHHSIPKSLEAFYQESGRAGRDGKPCDSIVYYSDRDVELYQFLNRQGNADEHLVESRQEKLKGVQDYCTKLRCRRVALLEYFGEKASASKICGRHGCDVC 425
            L+ ++FG  A  P Q   +  LL  RDVL +  TG GKSL +Q+PAL      + + LV++PL++LM +QV  ++AR I A  L+S+ S +  R++++ L    I   +LY++PE+     FL ++  L     + L+AVDEAHCIS WGH FR  Y +L V+K +FP VP+VALTATATP V+  I+R L +        SF R N+RY V     ++ A E  + +Y+  RR       +GIVY   R   + +A  L+  G+PAL YHAG++   R   Q +F  G+ PVV A++AFGMGID   +R+V+H+ +PK+LEA+YQESGRAGRDG   D I+YYSD D    + L  +  A E   E  + KL+G+ DYCT   CRR  LL YFGE+     IC   GCD C
Sbjct:    7 LLQRYFGHTAFNPYQREIIEDLLDGRDVLAVLATGGGKSLCYQIPALM----GDGVVLVISPLIALMKDQVDDLQARGIGAEALNSSGSYTTTRRILSELSEGLIQ--ILYVSPERAVGDDFLDLMASL----PVTLIAVDEAHCISMWGHQFRPEYRSLAVLKERFPDVPMVALTATATPDVRDDIVRQLNLANPSVYVGSFNRENLRYAV--FPKVEDAYER-LRAYLRSRRG-----DSGIVYVATREGAETLAARLRAGGIPALPYHAGMTAATRARTQDRFIGGKVPVVCATSAFGMGIDKPDVRFVVHYDMPKTLEAYYQESGRAGRDGGESDCILYYSDNDARRLRSLIDRDLASEFQREVARSKLQGMVDYCTTAECRRTVLLAYFGERFEG--ICS--GCDAC 396          
BLAST of Gcaud3024.t1 vs. uniprot
Match: A0A1M4MME4_9EURY (ATP-dependent DNA helicase RecQ n=6 Tax=Methanoculleus TaxID=45989 RepID=A0A1M4MME4_9EURY)

HSP 1 Score: 304 bits (778), Expect = 2.740e-94
Identity = 185/426 (43.43%), Postives = 253/426 (59.39%), Query Frame = 0
Query:   14 LVAKHFGFDALRPNQAVTVRHLLAQRDVLVIAPTGSGKSLTFQLPALYLHRRFNRLTLVVTPLLSLMHNQVASMRARRISASMLSSAESLSHNRQVIASLHRNHIPFALLYITPEKLTSPSFLQVLDKLYRNRKLALVAVDEAHCISEWGHDFRKAYANLGVVKSKFPTVPVVALTATATPFVQKHILRSLCIPRAEHVRASFLRSNVRYQVRYVHTLQTAVELDIISYVLRRRNVDQSFQTGIVYAFKRSTVDVVADLLKTNGVPALSYHAGLSTKARKAAQHKFERGECPVVVASTAFGMGIDVSAIRYVIHHSIPKSLEAFYQESGRAGRDGKPCDSIVYYSDRDVE-LYQFLNRQGNADEHLVESRQEKLKGVQDYCTKLRCRRVALLEYFGEKASASKICGRHGCDVCCDIKDVRRRMAIR 438
            ++ ++FG  A  P Q   +R LL  RDVL +  TG GKSL +Q+PAL        +TLV++PL++LM +QV  ++AR I A  L+S+ S +  R++++ L+ + I   +LY++PEK     FL ++  L     + L+AVDEAHCIS WGH FR  Y +L V+K +F  VP+VALTATATP V+  I R L +        SF R N+RY V  V   + A E  + +Y   RR        GI+Y   R   + +A  L+T+G+PAL YHAG++ +AR   Q KF  G+ PVV A++AFGMGID   +R V+H+ +PK+LEA+YQESGRAGRDGK  D I+YYSD D   L  F++R   A E   E  + KL+ + DYCT   CRR   LEYFGE+      C  +GCD C      R R   R
Sbjct:    7 ILQRYFGHSAFNPYQEEIIRDLLGGRDVLAVLATGGGKSLCYQVPALI----GEGVTLVISPLIALMKDQVDDLQARGIGAEALNSSCSYAATRRILSELNESLIQ--ILYVSPEKAVGDDFLDLMASL----PVTLIAVDEAHCISMWGHQFRPEYRSLAVLKERFAGVPMVALTATATPDVRDDIARQLNLANPSVYVGSFNRENLRYAV--VRKEKDAYER-LRAYFQGRRG-----DAGIIYVATREGAETLAARLRTDGIPALPYHAGMTARARAETQDKFIGGKVPVVCATSAFGMGIDKPDVRSVVHYDMPKTLEAYYQESGRAGRDGKESDCILYYSDDDARRLRTFIDRD-LASEFQREVARSKLQSMVDYCTITGCRRERFLEYFGERFEEP--C--NGCDTCAPAGKARPRSGRR 409          
BLAST of Gcaud3024.t1 vs. uniprot
Match: A0A0G1XUP8_9BACT (Helicase RecQ protein n=3 Tax=Parcubacteria group TaxID=1794811 RepID=A0A0G1XUP8_9BACT)

HSP 1 Score: 303 bits (776), Expect = 2.940e-94
Identity = 182/425 (42.82%), Postives = 255/425 (60.00%), Query Frame = 0
Query:   11 LTELVAKHFGFDALRPNQAVTVRHLLAQRDVLVIAPTGSGKSLTFQLPALYLHRRFNRLTLVVTPLLSLMHNQVASMRARRISASMLSSAESLSHNRQVIASLHRNHIPFALLYITPEKLTSPSFLQVLDKLYRNRKLALVAVDEAHCISEWGHDFRKAYANLGVVKSKFPTVPVVALTATATPFVQKHILRSLCIPR-AEHVRASFLRSNVRYQVR-----YVHTLQTAVELDIISYVLRRRNVDQSFQTGIVYAFKRSTVDVVADLLKTNGVPALSYHAGLSTKARKAAQHKFERGECPVVVASTAFGMGIDVSAIRYVIHHSIPKSLEAFYQESGRAGRDGKPCDSIVYYSDRDVELYQF-LNRQGNADEHLVESRQEKLKGVQDYCTKLRCRRVALLEYFGEKASASKICGRHGCDVCCDI 428
            + +++ KHFGFDA  P Q   +  +L ++DVLV+ PTG+GKSL +QLP+L L        LVV+PL++LM +QVASM  + I A+ L+S++     R+    +    +   LLY+ PE+L    FL+ L  +    +++ +AVDEAHCISEWGHDFR  Y  LG ++ KFP  P +ALTATAT  V++ I   L   + AEHV  SF R N+ Y +R     Y H         I+ YV    N      +GI+Y   R + + V   L+++G+ A+SYHAGL  K R   Q KF+RGE  V+VA+ AFGMGID   +R+VIHH IPK++E +YQE+GRAGRDGK  D I+++S  D   +QF +++  NA    V   + KL+ + ++CT   CRR  LL YFGE+    K CG   CD C D+
Sbjct:    1 MKKMLKKHFGFDAFMPFQEDIIADVLQKKDVLVVLPTGAGKSLCYQLPSLELPGT----ALVVSPLIALMKDQVASMERKNIPAAFLNSSQGAQEGREAKQKVLDGRVK--LLYVAPERLMKEGFLEFLSGV----EISFIAVDEAHCISEWGHDFRPEYRKLGELRDKFPRAPFIALTATATRKVREDIKSQLRFKKFAEHV-GSFDRKNLNYIIRPKQNTYYH---------ILGYVEDHPN-----WSGIIYCHSRKSTEQVTANLQSDGIAAVSYHAGLPQKERTENQDKFQRGEARVIVATIAFGMGIDKRDVRFVIHHDIPKNIEGYYQETGRAGRDGKQSDCILFFSWSDKMKHQFFIDQMRNAPRAAVA--EYKLEKLIEFCTSCSCRRKMLLAYFGEEYG-DKNCG--ACDTCVDL 395          
BLAST of Gcaud3024.t1 vs. uniprot
Match: A0A1G9ASW6_9EURY (ATP-dependent DNA helicase RecQ n=1 Tax=Methanoculleus thermophilus TaxID=2200 RepID=A0A1G9ASW6_9EURY)

HSP 1 Score: 303 bits (777), Expect = 4.500e-94
Identity = 180/413 (43.58%), Postives = 249/413 (60.29%), Query Frame = 0
Query:   14 LVAKHFGFDALRPNQAVTVRHLLAQRDVLVIAPTGSGKSLTFQLPALYLHRRFNRLTLVVTPLLSLMHNQVASMRARRISASMLSSAESLSHNRQVIASLHRNHIPFALLYITPEKLTSPSFLQVLDKLYRNRKLALVAVDEAHCISEWGHDFRKAYANLGVVKSKFPTVPVVALTATATPFVQKHILRSLCIPRAEHVRASFLRSNVRYQVRYVHTLQTAVELDIISYVLRRRNVDQSFQTGIVYAFKRSTVDVVADLLKTNGVPALSYHAGLSTKARKAAQHKFERGECPVVVASTAFGMGIDVSAIRYVIHHSIPKSLEAFYQESGRAGRDGKPCDSIVYYSDRDVE-LYQFLNRQGNADEHLVESRQEKLKGVQDYCTKLRCRRVALLEYFGEKASASKICGRHGCDVC 425
            ++ ++FG  A +P Q   +  LLA RDVL +  TG GKSL +Q+PAL      + +TLV++PL++LM +QV  ++AR I A  L+S+ S +  R++++ L   H+   +LY++PEK  S  FL +L  L     + L+A+DEAHCIS WGH FR  Y +L V+K +FP VP+VALTATATP V+  I R L +        SF R N+RY V      +     D +   LR R+ D     GIVY   R   + +A  L+ +GV AL YHAG++  AR   Q +F  G+ P++ A+ AFGMGID   +R+V+H+ IPK+LEA+YQESGRAGRDG   D I++Y D D + L  F++R     E   E  + KL+ + +YCT   CRR  LLEYFGE   A   CG  GCDVC
Sbjct:    7 ILQRYFGHTAFKPYQQEIIDDLLAGRDVLAVLATGGGKSLCYQVPALI----GDGVTLVISPLIALMKDQVDDLQARGIGAEALNSSGSYATTRRILSELEEGHVQ--ILYVSPEKAVSEDFLDLLSTL----PITLIAIDEAHCISMWGHQFRPEYRSLAVLKERFPGVPMVALTATATPDVRDDISRQLRLEDPSVYVGSFNRRNLRYAV----IPKDDGAYDRLRTYLRNRSGD----AGIVYVTTREGAETLAANLQADGVSALPYHAGMTAAARAETQDRFISGKVPIICATNAFGMGIDKPDVRFVVHYDIPKTLEAYYQESGRAGRDGNASDCILFYHDDDAKRLRSFIDRD-LPSEFQREVARSKLQSMVEYCTTTGCRRRVLLEYFGEHFDALP-CG--GCDVC 397          
The following BLAST results are available for this feature:
BLAST of Gcaud3024.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J545_9FLOR9.130e-25575.50ATP-dependent DNA helicase n=1 Tax=Gracilariopsis ... [more]
R7Q4Y6_CHOCR1.620e-15349.07ATP-dependent DNA helicase n=1 Tax=Chondrus crispu... [more]
A0A7S0ZH59_9RHOD2.500e-9941.72ATP-dependent DNA helicase n=1 Tax=Timspurckia oli... [more]
A0A5J4YN59_PORPP3.490e-9943.02ATP-dependent DNA helicase n=1 Tax=Porphyridium pu... [more]
A0A554I757_9BACT2.960e-9741.81ATP-dependent DNA helicase RecQ n=1 Tax=Parcubacte... [more]
A0A419G9A4_9BACT8.290e-9740.87ATP-dependent DNA helicase RecQ n=1 Tax=Candidatus... [more]
A0A2I0NNN3_9EURY1.300e-9442.96Recombinase RecQ n=1 Tax=Methanomicrobiales archae... [more]
A0A1M4MME4_9EURY2.740e-9443.43ATP-dependent DNA helicase RecQ n=6 Tax=Methanocul... [more]
A0A0G1XUP8_9BACT2.940e-9442.82Helicase RecQ protein n=3 Tax=Parcubacteria group ... [more]
A0A1G9ASW6_9EURY4.500e-9443.58ATP-dependent DNA helicase RecQ n=1 Tax=Methanocul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 20..226
e-value: 5.9E-31
score: 118.8
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 32..210
score: 22.712927
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 267..348
e-value: 4.9E-26
score: 102.5
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 254..347
e-value: 4.6E-16
score: 59.1
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 248..387
score: 18.052719
IPR004589DNA helicase, ATP-dependent, RecQ typeTIGRFAMTIGR00614TIGR00614coord: 15..445
e-value: 1.3E-127
score: 424.4
IPR032284ATP-dependent DNA helicase RecQ, zinc-binding domainPFAMPF16124RecQ_Zn_bindcoord: 360..426
e-value: 6.5E-11
score: 42.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 218..442
e-value: 3.3E-57
score: 195.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 3..217
e-value: 6.9E-74
score: 249.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 68..369
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 26..197
e-value: 2.7E-18
score: 66.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 565..580
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 476..496
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 545..563
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 445..470
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 532..580
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 442..496
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 8..553
NoneNo IPR availableCDDcd17920DEXHc_RecQcoord: 17..216
e-value: 6.08908E-84
score: 258.618

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_250_length_34171_cov_4.548005contigNODE_250_length_34171_cov_4.548005:12144..13886 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3024.t1Gcaud3024.t1Gracilaria caudata M_176_S67 malemRNANODE_250_length_34171_cov_4.548005 12144..13886 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3024.t1 ID=Gcaud3024.t1|Name=Gcaud3024.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=581bp
MDDGAGADELLTELVAKHFGFDALRPNQAVTVRHLLAQRDVLVIAPTGSG
KSLTFQLPALYLHRRFNRLTLVVTPLLSLMHNQVASMRARRISASMLSSA
ESLSHNRQVIASLHRNHIPFALLYITPEKLTSPSFLQVLDKLYRNRKLAL
VAVDEAHCISEWGHDFRKAYANLGVVKSKFPTVPVVALTATATPFVQKHI
LRSLCIPRAEHVRASFLRSNVRYQVRYVHTLQTAVELDIISYVLRRRNVD
QSFQTGIVYAFKRSTVDVVADLLKTNGVPALSYHAGLSTKARKAAQHKFE
RGECPVVVASTAFGMGIDVSAIRYVIHHSIPKSLEAFYQESGRAGRDGKP
CDSIVYYSDRDVELYQFLNRQGNADEHLVESRQEKLKGVQDYCTKLRCRR
VALLEYFGEKASASKICGRHGCDVCCDIKDVRRRMAIRVANHAAKSGSSR
PSNSVSTPAADFQSARSMLKQQRDKALAAKSAEAIDDFSEEEHDPEVRQA
VKDIDIGSDDDIDFEALKRAEKAHERKRLNKLKRPRDRIMNKLGLQTAQE
ASASGSVSKRRKSIQSKVIFGERRRRKSTP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR004589DNA_helicase_ATP-dep_RecQ
IPR032284RecQ_Zn-bd
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom