Gcaud8430.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud8430.t1
Unique NameGcaud8430.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length328
Homology
BLAST of Gcaud8430.t1 vs. uniprot
Match: A0A2V3IGG8_9FLOR (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGG8_9FLOR)

HSP 1 Score: 216 bits (551), Expect = 9.980e-66
Identity = 112/248 (45.16%), Postives = 165/248 (66.53%), Query Frame = 0
Query:   77 DHECAREYLASNAYVSDAHLSFLELVQNSSSESNGGSLFELQNQKLLRINLQQNKFSMAWIKHGTRVASLGNIRFKAAGMRDQRLTNVLKKTLTAEGMKLVKCEGNGVVFCADEQKLLHVLQLDEEEILYVNGSNLLAICADVKYDIKFMTGMNLASG-IFFVKLIGKGMVTFGCHGAVVALAASEASPVYTDPNATVAWTHAPTVKMDVSLKSLVGKGSGEEVQLEFKQGLVVVQPHHHVPVRESIK 323
            D + A+  + S+     +  S   LV  +  + +  SLFEL+  KLLRINL+  K + AWIK G  +A  G++      MR+Q L  ++KK ++ EGM L+KC+G+G+VFCAD+ KL+ ++ L E+  L++NG+++LA+   + YD   M G ++ASG +F +K+ G G++ F   G VV L AS  +PVYTDPN+TVAWTH P+ KM +S+KS+VG+GSGEEVQ EFK G+V+VQP   VPV E ++
Sbjct:    4 DEKQAQGMVTSSCDDESSKHSLSSLVARTRIQPSSQSLFELERSKLLRINLKPKKDNYAWIKLGCIIARQGDLNTSRQSMREQGLGKIVKKAVSGEGMNLIKCKGDGIVFCADDDKLVSLVHLHEQT-LFLNGNDVLALSPSLSYDFALMKGAHIASGSVFNIKVSGTGIMAFTSRGDVVTLEASPENPVYTDPNSTVAWTHQPSTKMALSMKSIVGRGSGEEVQFEFKGGVVIVQPFEEVPVSEPMR 250          
BLAST of Gcaud8430.t1 vs. uniprot
Match: Q12Z16_METBU (DUF124-domain protein n=3 Tax=Methanococcoides TaxID=2225 RepID=Q12Z16_METBU)

HSP 1 Score: 172 bits (435), Expect = 1.030e-48
Identity = 98/232 (42.24%), Postives = 142/232 (61.21%), Query Frame = 0
Query:   97 SFLELVQNSSSESNGGSLFELQNQKLLRINLQQNKFSMAWIKHGTRVASLGNIRFKAAGMRDQRLTNVLKKTLTAEGMKLVKCEGNGVVFCADEQKLLHVLQLDEEEILYVNGSNLLAICADVKYDIKFM---TGMNLASGIFFVKLIGKGMVTFGCHGAVVALAASEASPVYTDPNATVAWTH--APTVKMDVSLKSLVGKGSGEEVQLEFK-QGLVVVQPHHHVPVRESI 322
            S  E V  +  +  G  LFEL+  ++L +NL        W K G+ VA LGN++F   G+ +  +  +LKK +T EG+ L K EG G V+ AD  K + ++ LD E I +VNG++LLA    + +DIK M   TG+ +A G+F VKL G GMV    H   V L  ++ +PV+TDPNATVAW+   +P +K DVSLKS VG+ SGE +Q+ FK +G VV+QP+  +P ++ +
Sbjct:    5 SIEEFVNETGQKDKGEGLFELERDRMLELNLN----GRVWTKRGSMVAYLGNVKFTREGILEHGVGKLLKKAVTGEGISLTKAEGQGKVYLADAGKKISIINLDNEAI-FVNGNDLLAFEETIGWDIKMMKKVTGI-MAGGLFNVKLEGTGMVAITTHYDPVTLKVTKDTPVFTDPNATVAWSGNLSPDLKTDVSLKSFVGRSSGESIQMSFKGEGFVVIQPYEEIPFQQPV 230          
BLAST of Gcaud8430.t1 vs. uniprot
Match: A0A7Y3GKF6_9DELT (AIM24 family protein n=1 Tax=Desulfobacterales bacterium TaxID=2044940 RepID=A0A7Y3GKF6_9DELT)

HSP 1 Score: 170 bits (431), Expect = 3.850e-48
Identity = 100/226 (44.25%), Postives = 139/226 (61.50%), Query Frame = 0
Query:   97 SFLELVQNSSSESNGGSLFELQNQKLLRINLQQNKFSMAWIKHGTRVASLGNIRFKAAGMRDQRLTNVLKKTLTAEGMKLVKCEGNGVVFCADEQKLLHVLQLDEEEILYVNGSNLLAICADVKYDIKFM---TGMNLASGIFFVKLIGKGMVTFGCHGAVVALAASEASPVYTDPNATVAWTHA--PTVKMDVSLKSLVGKGSGEEVQLEFK-QGLVVVQPHHHV 316
            S  E V  +S +  G  LFEL++ +LL INL      M W K G+ VA  G ++F   G+ +  L  ++KKT++ EG KL K EG G ++ AD  K + ++ L  E I +VNG++LLA   D+++DIK M    GM LA G+F VKL G GM+    H   + L  S + PV TDPNATVAW  A  P +K DVS+K+L+G+GSGE +Q++F+ +G VVVQP   V
Sbjct:    5 SLTEFVHRTSQKERGQGLFELESDRLLEINLN----GMVWTKTGSMVAHTGGMKFTREGVFEHGLAKLVKKTISGEGAKLTKAEGCGALYLADSGKKISIINLKNESI-FVNGNDLLAFEGDIQWDIKIMKKIAGM-LAGGLFNVKLEGTGMLAITSHHDPLTLKVSSSKPVITDPNATVAWAGALSPEIKTDVSVKTLLGRGSGESIQMKFQGEGFVVVQPFEEV 224          
BLAST of Gcaud8430.t1 vs. uniprot
Match: A0A4E0Q0C0_9EURY (Uncharacterized protein n=1 Tax=Methanolobus halotolerans TaxID=2052935 RepID=A0A4E0Q0C0_9EURY)

HSP 1 Score: 169 bits (427), Expect = 1.610e-47
Identity = 91/222 (40.99%), Postives = 135/222 (60.81%), Query Frame = 0
Query:  100 ELVQNSSSESNGGSLFELQNQKLLRINLQQNKFSMAWIKHGTRVASLGNIRFKAAGMRDQRLTNVLKKTLTAEGMKLVKCEGNGVVFCADEQKLLHVLQLDEEEILYVNGSNLLAICADVKYDIKFMTGMN--LASGIFFVKLIGKGMVTFGCHGAVVALAASEASPVYTDPNATVAWTH--APTVKMDVSLKSLVGKGSGEEVQLEFK-QGLVVVQPHHHV 316
            E ++N+S +  G   FEL+ +++L +NL        W K GT VA LGN+RF   G+ +  L   +K+  T EG+ L K EG G V+ AD  K + ++ LD + I YVNG++LLA    + +DIK M  M   ++ G+F +KL GKGM+    H   + L  +  +PVYTDPNATVAW+    P +K D+SLK+ +G+ SGE +Q+ FK +G VV+QP+  +
Sbjct:    8 EFIENTSQKDLGQGKFELERERMLEVNLD----GKVWTKRGTMVAYLGNVRFTREGVLEHGLGKFVKEAFTGEGLSLTKAEGTGKVYLADSGKKISIINLDNDSI-YVNGNDLLAFEESINWDIKLMRKMAGVMSGGLFNIKLEGKGMIAITTHYDPLTLKVTGNTPVYTDPNATVAWSGNLKPDIKTDISLKTFMGRSSGESIQMAFKGEGFVVIQPYEEI 224          
BLAST of Gcaud8430.t1 vs. uniprot
Match: UPI001AE3DBE4 (AIM24 family protein n=1 Tax=Methanohalophilus levihalophilus TaxID=1431282 RepID=UPI001AE3DBE4)

HSP 1 Score: 169 bits (427), Expect = 1.710e-47
Identity = 95/229 (41.48%), Postives = 143/229 (62.45%), Query Frame = 0
Query:  100 ELVQNSSSESNGGSLFELQNQKLLRINLQQNKFSMAWIKHGTRVASLGNIRFKAAGMRDQRLTNVLKKTLTAEGMKLVKCEGNGVVFCADEQKLLHVLQLDEEEILYVNGSNLLAICADVKYDIKFM---TGMNLASGIFFVKLIGKGMVTFGCHGAVVALAASEASPVYTDPNATVAWTH--APTVKMDVSLKSLVGKGSGEEVQLEFK-QGLVVVQPHHHVPVRESI 322
            E V+ +S +  G  LFE++N+++L +NL        W K G+ VA +G+++F   G+ +  +  +LKK +T EGM L K EG G V+ AD  K + VL LD + I YVNG++LLA    +K+DIK +   TG+ +A G+F V+L G GMV    H   + L  S+   V+TDPNATVAW+    P +K D+SLK+ VG+ SGE +Q+ FK +G VV+QP+  +P + ++
Sbjct:    8 EFVEMTSQKDRGEGLFEMENERMLELNLN----GRVWTKKGSMVAYIGDVKFTREGVLEHGVGKMLKKAVTGEGMSLTKAEGQGKVYLADAGKKISVLNLDNDSI-YVNGNDLLAFEDGIKWDIKMLKKVTGV-MAGGLFNVRLEGSGMVAITTHYDPLTLKVSKDRSVFTDPNATVAWSGNLKPDLKTDISLKTFVGRTSGESIQMAFKGEGFVVIQPYEEIPFQSTV 230          
BLAST of Gcaud8430.t1 vs. uniprot
Match: A0A2V3J5K9_9FLOR (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K9_9FLOR)

HSP 1 Score: 170 bits (431), Expect = 3.820e-47
Identity = 82/213 (38.50%), Postives = 143/213 (67.14%), Query Frame = 0
Query:  101 LVQNSSSESNGGSLFELQNQKLLRINLQQNKFSMAWIKHGTRVASLGNIRFKAAGMRDQRLTNVLKKTLTAEGMKLVKCEGNGVVFCADEQKLLHVLQLDEEEILYVNGSNLLAICADVKYDIKFMTGMNLA-SGIFFVKLIGKGMVTFGCHGAVVALAASEASPVYTDPNATVAWTHAPTVKMDVSLKSLVGKGSGEEVQLEFKQGLVVVQP 312
            LV+N+ +++ G  +FE++  ++L+INL  +  S AWIK GT +A  G ++F   G R+Q    ++KK +T EG+KLV+C+G+G+V+CAD+ K + V++L ++ I YVN  N+LA+ + ++Y+ K ++   +A SG+  +K+ G G ++       + + A+   P+Y+ P+ATVAWTH P+  +D+S + L G+ +G+EVQL+F  G V++QP
Sbjct:   70 LVENTRAKAKGYPVFEVERDRVLQINLGGSHDSFAWIKAGTVIARRGTVKFTRQGFREQGAGLLVKKAVTGEGLKLVQCKGSGIVYCADDAKAVSVIELRKQTI-YVNSPNVLALSSSLRYEFKLLSNAGMAASGLLSLKISGLGFLSVTSLKGAIMMTATPDDPLYSKPDATVAWTHHPSFTVDLSPRLLTGRATGQEVQLKFTHGFVIIQP 281          
BLAST of Gcaud8430.t1 vs. uniprot
Match: A0A0E3SQF2_METMT (DUF124 domain-containing protein n=5 Tax=Methanococcoides TaxID=2225 RepID=A0A0E3SQF2_METMT)

HSP 1 Score: 167 bits (423), Expect = 6.570e-47
Identity = 97/231 (41.99%), Postives = 140/231 (60.61%), Query Frame = 0
Query:   97 SFLELVQNSSSESNGGSLFELQNQKLLRINLQQNKFSMAWIKHGTRVASLGNIRFKAAGMRDQRLTNVLKKTLTAEGMKLVKCEGNGVVFCADEQKLLHVLQLDEEEILYVNGSNLLAICADVKYDIKFM---TGMNLASGIFFVKLIGKGMVTFGCHGAVVALAASEASPVYTDPNATVAWTH--APTVKMDVSLKSLVGKGSGEEVQLEFK-QGLVVVQPHHHVPVRES 321
            S  E +  +     G  LFEL+  ++L +NL        W K G+ +A LG+++F   G+ +  +  +LKK +T EG+ L K EG G V+ ADE K + +L+LD + I +VNG++LLA    + +DIK M   TGM LA G+F VKL G GMV    H   + L  ++  PV+TDPNATVAW+    P +K DVSLK+ VG+ SGE VQ+ FK +G VV+QP+  +P + +
Sbjct:    5 SIEEFIDQTGQRDLGEGLFELERDRMLELNLN----GRVWTKRGSMIAYLGDVKFTREGVLEHGVGKMLKKAVTGEGVSLTKAEGRGKVYLADEGKKISILKLDNDSI-FVNGNDLLAFEDGINWDIKIMKKVTGM-LAGGLFNVKLEGSGMVAITTHYDPLTLQVTKDRPVFTDPNATVAWSGNLKPDLKTDVSLKTFVGRSSGESVQMAFKGEGFVVIQPYEELPFQTA 229          
BLAST of Gcaud8430.t1 vs. uniprot
Match: A0A1V4Z3I8_9EURY (Uncharacterized protein n=1 Tax=Methanocella sp. PtaU1.Bin125 TaxID=1811677 RepID=A0A1V4Z3I8_9EURY)

HSP 1 Score: 166 bits (421), Expect = 1.350e-46
Identity = 95/230 (41.30%), Postives = 140/230 (60.87%), Query Frame = 0
Query:   97 SFLELVQNSSSESNGGSLFELQNQKLLRINLQQNKFSMAWIKHGTRVASLGNIRFKAAGMRDQRLTNVLKKTLTAEGMKLVKCEGNGVVFCADEQKLLHVLQLDEEEILYVNGSNLLAICADVKYDIKFMTGMN--LASGIFFVKLIGKGMVTFGCHGAVVALAASEASPVYTDPNATVAWTH--APTVKMDVSLKSLVGKGSGEEVQLEFK-QGLVVVQPHHHVPVRES 321
            S  E V  +S +  G  +FEL+N ++L INL      M WIK G  VA LGNIRF+  GM +  L  +LKK +T EG+ L+K  G G ++ A   K + ++ L  E I +VNG+++LA    VK+DIK M  M+  +A G+F VKL G GMV    +G    L  ++  PV TDPNATVAW+   +P ++ D++ K+L+G+GSGE +Q  +  +G VV+QP+  V  +++
Sbjct:    5 SLEEFVNQTSQKDKGEGVFELENHRMLEINLN----GMMWIKAGAMVAYLGNIRFEREGMLEAGLDKLLKKAITGEGVHLMKATGAGKLYVAQNGKRISIINLQNESI-FVNGNDVLAFEPTVKWDIKMMRRMSSMMAGGLFNVKLEGTGMVAITTYGEPTTLRVTKGQPVITDPNATVAWSGNLSPEIRTDITFKTLLGRGSGESIQSVYAGEGFVVIQPYEEVYFQQT 229          
BLAST of Gcaud8430.t1 vs. uniprot
Match: UPI001AEA08D1 (AIM24 family protein n=1 Tax=Methanolobus bombayensis TaxID=38023 RepID=UPI001AEA08D1)

HSP 1 Score: 166 bits (420), Expect = 1.790e-46
Identity = 95/224 (42.41%), Postives = 136/224 (60.71%), Query Frame = 0
Query:  100 ELVQNSSSESNGGSLFELQNQKLLRINLQQNKFSMAWIKHGTRVASLGNIRFKAAGMRDQRLTNVLKKTLTAEGMKLVKCEGNGVVFCADEQKLLHVLQLDEEEILYVNGSNLLAICADVKYDIKFM---TGMNLASGIFFVKLIGKGMVTFGCHGAVVALAASEASPVYTDPNATVAWTH--APTVKMDVSLKSLVGKGSGEEVQLEFK-QGLVVVQPHHHVP 317
            E V+N+  +  G   FEL+  ++L +NL        W+K G  VA LG+++F   G+ +  L  ++KK +T EG+ L K EG G V+ AD  K + ++ LD E I YVNG++LLA    +K+DIK M    GM +A G+F VKL G GM+    H   + L  +   PV+TDPNATVAW+    P +K D+SLK+LVG+ SGE +Q+ FK  G VV+QP+  +P
Sbjct:    8 EFVKNTGQKDLGQGKFELERDRMLEVNLD----GRIWMKMGAMVAYLGDVKFTREGVLEHGLGKLVKKAVTGEGVTLTKAEGAGKVYLADSGKKISIINLDNEAI-YVNGNDLLAFEESIKWDIKMMKKVAGM-MAGGLFNVKLEGTGMIAITTHYDPLTLRVTPDRPVFTDPNATVAWSENLVPDIKTDISLKTLVGRSSGESLQMAFKGDGFVVIQPYEEIP 225          
BLAST of Gcaud8430.t1 vs. uniprot
Match: A0A2G2L7D5_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula sp. TaxID=2024826 RepID=A0A2G2L7D5_9BACT)

HSP 1 Score: 166 bits (419), Expect = 2.670e-46
Identity = 94/228 (41.23%), Postives = 141/228 (61.84%), Query Frame = 0
Query:   91 VSDAHLSFLELVQNSSSESNGGSLFELQNQKLLRINLQQNKFSMAWIKHGTRVASLGNIRFKAAGMRDQRLTNVLKKTLTAEGMKLVKCEGNGVVFCADEQKLLHVLQLDEEEILYVNGSNLLAICADVKYDIKFMTGMN--LASGIFFVKLIGKGMVTFGCHGAVVALAASEASPVYTDPNATVAWTHA--PTVKMDVSLKSLVGKGSGEEVQLEF-KQGLVVVQPH 313
             +D   S  E V+ ++   +G   FE+++ ++L +NL        W K G+ ++ +GNI+F   G+ ++ + N LKK +T EG KL K  GNG V+ AD  K + +L+L+ EE L VNG+++LA    V+++IK M  ++  +A G+F VKL G GMV    H   + L  +   P+YTDPNATVAW+ +  P +K+D SLKSL G+GSGE  Q+EF  QG VV+QP+
Sbjct:    3 TTDNRYSLREFVEKTAERDHGQGFFEMESPRILEVNLNGE----VWTKMGSMISYVGNIKFIREGILEKGIGNFLKKAVTGEGAKLTKATGNGKVYLADYGKKIQILKLENEE-LVVNGNDILAFEMCVEWEIKMMKKVSSMMAGGLFQVKLRGTGMVAITTHYEPMTLVVTPDQPIYTDPNATVAWSGSLEPNLKIDASLKSLFGRGSGESFQMEFIGQGFVVIQPY 225          
The following BLAST results are available for this feature:
BLAST of Gcaud8430.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IGG8_9FLOR9.980e-6645.16Altered inheritance of mitochondria protein 24, mi... [more]
Q12Z16_METBU1.030e-4842.24DUF124-domain protein n=3 Tax=Methanococcoides Tax... [more]
A0A7Y3GKF6_9DELT3.850e-4844.25AIM24 family protein n=1 Tax=Desulfobacterales bac... [more]
A0A4E0Q0C0_9EURY1.610e-4740.99Uncharacterized protein n=1 Tax=Methanolobus halot... [more]
UPI001AE3DBE41.710e-4741.48AIM24 family protein n=1 Tax=Methanohalophilus lev... [more]
A0A2V3J5K9_9FLOR3.820e-4738.50Altered inheritance of mitochondria protein 24, mi... [more]
A0A0E3SQF2_METMT6.570e-4741.99DUF124 domain-containing protein n=5 Tax=Methanoco... [more]
A0A1V4Z3I8_9EURY1.350e-4641.30Uncharacterized protein n=1 Tax=Methanocella sp. P... [more]
UPI001AEA08D11.790e-4642.41AIM24 family protein n=1 Tax=Methanolobus bombayen... [more]
A0A2G2L7D5_9BACT2.670e-4641.23Uncharacterized protein n=1 Tax=Blastopirellula sp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036983Mitochondrial biogenesis AIM24 superfamilyGENE3D3.60.160.10Mitochondrial biogenesis AIM24coord: 110..326
e-value: 5.0E-26
score: 93.4
IPR002838Mitochondrial biogenesis protein AIM24PFAMPF01987AIM24coord: 115..312
e-value: 2.4E-18
score: 66.6
NoneNo IPR availablePANTHERPTHR38074FAMILY NOT NAMEDcoord: 102..318
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..327
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..20
IPR016031Tryptophan RNA-binding attenuator protein-like domain superfamilySUPERFAMILY51219TRAP-likecoord: 120..321

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_248_length_34309_cov_4.396809contigNODE_248_length_34309_cov_4.396809:28696..29749 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud8430.t1Gcaud8430.t1Gracilaria caudata M_176_S67 malemRNANODE_248_length_34309_cov_4.396809 28696..29749 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud8430.t1 ID=Gcaud8430.t1|Name=Gcaud8430.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=328bp
MTHADIKRFKRLASTTLATVSAAAFSKDKMNTESRCPSVITNLVARAASS
AAKPAPVIVTPAPASDSAAFSDSDDFDHECAREYLASNAYVSDAHLSFLE
LVQNSSSESNGGSLFELQNQKLLRINLQQNKFSMAWIKHGTRVASLGNIR
FKAAGMRDQRLTNVLKKTLTAEGMKLVKCEGNGVVFCADEQKLLHVLQLD
EEEILYVNGSNLLAICADVKYDIKFMTGMNLASGIFFVKLIGKGMVTFGC
HGAVVALAASEASPVYTDPNATVAWTHAPTVKMDVSLKSLVGKGSGEEVQ
LEFKQGLVVVQPHHHVPVRESIKPSVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036983AIM24_sf
IPR002838AIM24
IPR016031Trp_RNA-bd_attenuator-like_dom