Gcaud7546.t1 (polypeptide) Gracilaria caudata M_176_S67 male
|
Overview
Homology
BLAST of Gcaud7546.t1 vs. uniprot
Match: A9TVD2_PHYPA (Predicted protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9TVD2_PHYPA) HSP 1 Score: 104 bits (259), Expect = 8.750e-25 Identity = 63/148 (42.57%), Postives = 95/148 (64.19%), Query Frame = 0
Query: 55 VLPPGTRVRITGNNRTKWDLIGRHGTVLSAQTLGGWHEVSLTDGGIVRVQRNALHVLKFPNRHTP-------PLPSRPSIAKPQANISKLNVASLRRYRSVYNL-DVAKDCSKDELVGAVKKHFEKAKVNESEVITSFLRQIARRGAS 194
VLP T+V +TGNNRTK L+G HG V A LGGWH + LT+G V++QRNAL V++ P+ H P S S+ ++SKL VA+L+RYR + L +V + +K++L+ AV +HF +++E++VI++F+ Q A+R S
Sbjct: 26 VLPRHTKVLVTGNNRTKSVLVGLHGVVTKAVGLGGWHWLVLTNGDEVKLQRNALSVIEAPSGHEEHDENEDNPFSSGTSLVL-SVDLSKLEVAALKRYRRHFKLVEVGPNSTKEQLLHAVGRHFMSQELDETQVISAFM-QAAKRPRS 171
BLAST of Gcaud7546.t1 vs. uniprot
Match: A0A1X6NV33_PORUM (SAP30_Sin3_bdg domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NV33_PORUM) HSP 1 Score: 107 bits (266), Expect = 1.010e-23 Identity = 83/245 (33.88%), Postives = 102/245 (41.63%), Query Frame = 0
Query: 53 DPVLPPGTRVRITGNNRTKWDLIGRHGTVLSAQTLGGWHEVSL-TDGGIVRVQRNALHVLKFPNRHTPPLPSRPSIAKPQ----------------------------------------------------------------------------------------------------ANISKLNVASLRRYRSVYNLDVAKDCSKDELVGAVKKHFEKAKVNESEVITSFLRQIARRGASPA 196
D VLPPG+ VRI+GNNRTK LIG+ G V+S+QTLGGWHEVSL GG+VRVQRNAL VL P +P P P AN L SL RYR+VY L+VA DCS+DELV AV++HF + V+E +VI+ FLR++ R +SPA
Sbjct: 210 DAVLPPGSLVRISGNNRTKLQLIGKVGRVVSSQTLGGWHEVSLEAGGGVVRVQRNALEVLAL----APAVPGVPVHGHPTSTGRSGGXXXXXXXXXXXXXXXXXSATAPDNGSARHGHGSAPSRGNASGLVSSPADGGGSTSRAGDXKXXXXXXXXXXXXXXXXXXRLRVGGAGPGAGTVANFDALQFDSLNRYRTVYGLNVAVDCSRDELVRAVRRHFASSSVDELQVISDFLRRV-RHCSSPA 449
BLAST of Gcaud7546.t1 vs. uniprot
Match: A0A7I8L194_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8L194_SPIIN) HSP 1 Score: 91.7 bits (226), Expect = 1.110e-19 Identity = 64/156 (41.03%), Postives = 85/156 (54.49%), Query Frame = 0
Query: 55 VLPPGTRVRITGNNRTKWDLIGRHGTVLSAQTLGGWHEVSLTDGGIVRVQRNALHVLKFPNR----HTPPLPSRPS----IAKPQ----ANISKLNVASLRRYRSVYNLDVAK-DCSKDELVGAVKKHFEKAKVNESEVITSFLRQIARRGASPAG 197
VLPP T+V +TGNNRT+ L+G G V + LGGWH + LT+G V++QRNAL V++ P R H L S S +PQ +I KL SL RY + LD SK +L+ AV++HF ++ES+VI FL R S G
Sbjct: 32 VLPPHTKVVVTGNNRTRSVLVGLQGVVKKSVGLGGWHWLVLTNGVEVKLQRNALSVIEAPTREQEDHCKSLLSGSSHLQFTTRPQQKLTVDIGKLGAVSLWRYWRHFKLDGKNVPSSKAQLIEAVERHFISQNLDESQVIADFLHAAKRLRQSVHG 187
BLAST of Gcaud7546.t1 vs. uniprot
Match: A0A4D8ZAU6_SALSN (SAP30_Sin3_bdg domain-containing protein n=3 Tax=Salvia splendens TaxID=180675 RepID=A0A4D8ZAU6_SALSN) HSP 1 Score: 89.0 bits (219), Expect = 2.730e-18 Identity = 58/150 (38.67%), Postives = 86/150 (57.33%), Query Frame = 0
Query: 54 PVLPPGTRVRITGNNRTKWDLIGRHGTVLSAQTLGGWHEVSLTDGGIVRVQRNALHVLKFP--NRHTPPLP-------SRPSIAKPQANISKLNVASLRRYRSVYNL-DVAKDCSKDELVGAVKKHFEKAKVN---ESEVITSFLRQIAR 190
P LP T+V ITGN+RT+ DL+G G V A +GGWH + L++G V++QRNAL V + P N + + S K +++KL+ SLRRY Y+L D+A + +K++L+ A ++HF KV+ E +VIT F R
Sbjct: 68 PGLPRHTKVTITGNSRTRKDLVGMEGVVTKAGGIGGWHWLLLSNGEKVKLQRNALTVSEPPTGNEEDDDIDDSASGSDTNHSTCKEGVDLAKLSSESLRRYCEKYHLVDIASNPTKEQLIKAAQEHFSSQKVDGDEEEQVITEFSNAAKR 217
BLAST of Gcaud7546.t1 vs. uniprot
Match: A0A1D1Z862_9ARAE (Histone deacetylase complex subunit SAP30L n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1Z862_9ARAE) HSP 1 Score: 87.4 bits (215), Expect = 4.440e-18 Identity = 61/158 (38.61%), Postives = 85/158 (53.80%), Query Frame = 0
Query: 55 VLPPGTRVRITGNNRTKWDLIGRHGTVLSAQTLGGWHEVSLTDGGIVRVQRNALHVLKFPNRHTP------PLPSRP---SIAKPQA----NISKLNVASLRRYRSVYNLDVA--KDCSKDELVGAVKKHFEKAKVNESEVITSFLRQIARRGASPAG 197
VLPP T+V +TGNNRT+ L+G G V + LGGWH + LT+G V++QRNAL V++ P R PL S +PQ +I KL SL RY Y L+ + SK++L+ V++HF +++E +VI FL R S G
Sbjct: 28 VLPPQTKVVVTGNNRTRSVLVGLQGVVKKSVGLGGWHWLVLTNGVEVKLQRNALSVIEAPVREEQHECVQGPLSGASHFGSAKQPQGKLTVDIRKLGAVSLWRYWRHYKLEGKNFRPSSKEQLIEVVQRHFVSQQLDEFQVIAGFLHAAKRLRESVHG 185
BLAST of Gcaud7546.t1 vs. uniprot
Match: UPI001CB92D9F (uncharacterized protein LOC122589311 isoform X1 n=2 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB92D9F) HSP 1 Score: 72.0 bits (175), Expect = 5.920e-12 Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 0
Query: 55 VLPPGTRVRITGNNRTKWDLIGRHGTVLSAQTLGGWHEVSLTDGGIVRVQRNALHVLKFP 114
VLPP T+V +TGNNRTK L+G HG V A LGGWH + LT+G V++QRNAL V++ P
Sbjct: 32 VLPPHTKVVVTGNNRTKSVLVGLHGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAP 91
BLAST of Gcaud7546.t1 vs. uniprot
Match: A0A164ZQU4_DAUCS (SAP30_Sin3_bdg domain-containing protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A164ZQU4_DAUCS) HSP 1 Score: 69.3 bits (168), Expect = 8.690e-11 Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 0
Query: 55 VLPPGTRVRITGNNRTKWDLIGRHGTVLSAQTLGGWHEVSLTDGGIVRVQRNALHVLKFPN 115
VLPP T+V +TGNNRTK L+G HG V LGGWH + LT+G V++QRNAL V++ P+
Sbjct: 16 VLPPHTKVVVTGNNRTKSVLVGLHGVVKKPLGLGGWHWLVLTNGIDVKLQRNALSVVEPPS 76
BLAST of Gcaud7546.t1 vs. uniprot
Match: A0A5A7QVK0_STRAF (Histone deacetylase complex subunit SAP30 homolog n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QVK0_STRAF) HSP 1 Score: 68.9 bits (167), Expect = 1.090e-10 Identity = 34/60 (56.67%), Postives = 43/60 (71.67%), Query Frame = 0
Query: 55 VLPPGTRVRITGNNRTKWDLIGRHGTVLSAQTLGGWHEVSLTDGGIVRVQRNALHVLKFP 114
VLPP T+V +TGNNRTK L+G G V A LGGWH + LT+G V++QRNAL V++ P
Sbjct: 33 VLPPHTKVVVTGNNRTKSVLVGLRGVVKKAVGLGGWHWLVLTNGIEVKLQRNALSVIEAP 92
BLAST of Gcaud7546.t1 vs. uniprot
Match: UPI001C267018 (uncharacterized protein LOC121779358 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C267018) HSP 1 Score: 65.9 bits (159), Expect = 3.340e-10 Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 0
Query: 56 LPPGTRVRITGNNRTKWDLIGRHGTVLSAQTLGGWHEVSLTDGGIVRVQRNALHVLKFP 114
LP T+V ITGNNRT+ DL+G G V A +GGWH + L +G V++QRNAL VL+ P
Sbjct: 66 LPRHTKVTITGNNRTRKDLVGLEGVVTKAGGIGGWHWLELNNGEEVKLQRNALTVLEPP 124
BLAST of Gcaud7546.t1 vs. uniprot
Match: UPI001CB8C24C (uncharacterized protein LOC122580541 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8C24C) HSP 1 Score: 66.6 bits (161), Expect = 4.490e-10 Identity = 33/60 (55.00%), Postives = 42/60 (70.00%), Query Frame = 0
Query: 55 VLPPGTRVRITGNNRTKWDLIGRHGTVLSAQTLGGWHEVSLTDGGIVRVQRNALHVLKFP 114
VLPP T+V +TGNNRTK L+G G V A GGWH + LT+G V++QRNAL V++ P
Sbjct: 21 VLPPDTKVVVTGNNRTKSLLVGLQGVVKKAVGSGGWHWLVLTNGIEVKLQRNALSVIEAP 80 The following BLAST results are available for this feature:
BLAST of Gcaud7546.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud7546.t1 ID=Gcaud7546.t1|Name=Gcaud7546.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=200bpback to top |