Gcaud7634.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7634.t1
Unique NameGcaud7634.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length106
Homology
BLAST of Gcaud7634.t1 vs. uniprot
Match: A0A2V3IXM0_9FLOR (Protein disulfide-isomerase LQY1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXM0_9FLOR)

HSP 1 Score: 148 bits (373), Expect = 2.580e-44
Identity = 71/105 (67.62%), Postives = 81/105 (77.14%), Query Frame = 0
Query:    1 MMDQNAVAIVATMVAGIGGGIALVAWTENQGKRTELRANIQPCAECGGETTTVCNVCNGSTKDPLDASKLCSYCEGNGSIKCFNCSGSGIQPRFLDRLSPEDFMD 105
            M++Q+ +AI+ATM+AG+GGGIALVAWTE+QGKRTELR N QPCAEC GETTTVCNVCNGS +DPLD SK                  SGIQPRFLDRLSP+DFMD
Sbjct:    1 MIEQSTIAIIATMLAGMGGGIALVAWTESQGKRTELRENTQPCAECQGETTTVCNVCNGSKQDPLDDSKXXXXXXXXXXXXXXXXXXSGIQPRFLDRLSPDDFMD 105          
BLAST of Gcaud7634.t1 vs. uniprot
Match: A0A1X6NIH9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NIH9_PORUM)

HSP 1 Score: 129 bits (324), Expect = 3.440e-36
Identity = 61/111 (54.95%), Postives = 76/111 (68.47%), Query Frame = 0
Query:    1 MMDQNAVAIVATMVAGIGGGIALVAWTENQGKRTELRANIQPCAECGGETTTVCNVCNGSTKDPL------DASKLCSYCEGNGSIKCFNCSGSGIQPRFLDRLSPEDFMD 105
            M+D   ++ +   VAG  GGIAL+A+TE QGKR + R N+QPC EC G   T CNVC G+  DPL      D +  C+Y  G G +KCFNC+GSGIQPRFLDR+SP+DFMD
Sbjct:   46 MVDYGTLSGLGVAVAGAFGGIALMAFTEQQGKRGQERTNLQPCVECKGTKVTTCNVCKGNGLDPLAEALGEDKATKCTYXXGAGDLKCFNCAGSGIQPRFLDRVSPDDFMD 156          
BLAST of Gcaud7634.t1 vs. uniprot
Match: A0A7S3U1S3_9SPIT (Hypothetical protein (Fragment) n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3U1S3_9SPIT)

HSP 1 Score: 98.2 bits (243), Expect = 1.910e-23
Identity = 55/149 (36.91%), Postives = 73/149 (48.99%), Query Frame = 0
Query:    2 MDQNAVAIVATMVAGIGGGIALVAWTENQGKRTELRANIQPCAECGGETTTVCNVCNGSTKDPL--------DAS-------------------------------------KLCSYCEGNGSIKCFNCSGSGIQPRFLDRLSPEDFMD 105
            +D + V  VA  +AG+ GG+ ++A+TE+ GKR E  AN QPC EC G+    C +C GS +DPL        +AS                                      +C  CEG G + C NC G+GIQPRFL+R SP+DFMD
Sbjct:   51 IDGSTVLGVAVGLAGVLGGVGIIAFTESAGKRNEELANAQPCVECKGKKVVECTICEGSGEDPLVSLVQGVREASGEIKASNVVKIEDWAEGPKEVVMFEDILSAYPKKVEKDVCLNCEGRGVVVCDNCRGTGIQPRFLERYSPDDFMD 199          
BLAST of Gcaud7634.t1 vs. uniprot
Match: A0A7S3W6S8_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3W6S8_EMIHU)

HSP 1 Score: 85.9 bits (211), Expect = 1.310e-18
Identity = 51/154 (33.12%), Postives = 68/154 (44.16%), Query Frame = 0
Query:    2 MDQNAVAIVATMVAGIGGGIALVAWTENQGKRTELRANIQPCAECG----GETTTVCNVCNGSTKDPLD----------------------------------------------ASKLCSYCEGNGSIKCFNCSGSGIQPRFLDRLSPEDFMD 105
            +D N++   A  + G+GGG+ L+A+TEN GKR E   N QPC   G    G   T CNVC G+  DPL                                                 ++C  C+G G + C NC G+ +QPRFL+R SP+DFMD
Sbjct:   54 IDVNSIIGAAVGLLGVGGGVGLIAFTENAGKRNEEADNSQPCVTPGCVANGGVVT-CNVCKGTGVDPLSELVAGVRQATGDTASANVVKVEDWGGDSAREVVMYEKLLSNFPPKVTEEVCLVCDGRGVVVCDNCQGTTVQPRFLERYSPDDFMD 206          
BLAST of Gcaud7634.t1 vs. uniprot
Match: A0A5J4YNM6_PORPP (Protein SPA, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YNM6_PORPP)

HSP 1 Score: 84.0 bits (206), Expect = 3.740e-18
Identity = 44/107 (41.12%), Postives = 54/107 (50.47%), Query Frame = 0
Query:    1 MMDQNAVAIVATMVAGIGGGIALVAWTENQGKRTELRANIQPCAECGGETTTVCNVCNGSTKDPLDASKLCSYCEGNGSIKCFNCSGSGIQPRFL--DRLSPEDFMD 105
            ++D N V  V T + G+GGGI LVAWTENQG RTE R N QPC +C G     C +C G+  DP+  S+                            DRLSP+DFMD
Sbjct:   69 VVDTNTVIAVVTALLGVGGGIGLVAWTENQGLRTEQRVNDQPCFDCKGSKQVTCGICKGNGLDPVFKSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRLSPDDFMD 175          
BLAST of Gcaud7634.t1 vs. uniprot
Match: M2XWY2_GALSU (Chaperone protein / DnaJ-related protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XWY2_GALSU)

HSP 1 Score: 80.5 bits (197), Expect = 4.900e-17
Identity = 39/94 (41.49%), Postives = 48/94 (51.06%), Query Frame = 0
Query:   12 TMVAGIGGGIALVAWTENQGKRTELRANIQPCAECGGETTTVCNVCNGSTKDPLDASKLCSYCEGNGSIKCFNCSGSGIQPRFLDRLSPEDFMD 105
            T   G+  GIA + WTE QG R   R N+QPC  C G+    C  C GS K+P + S+L                   IQPR+LDR SPEDF+D
Sbjct:   59 TAALGLTAGIAFLVWTEKQGVRGSQRENLQPCVVCNGQKRLECIRCKGSGKNPTEESELXXXXXXXXXXXXXXXXXXXIQPRYLDRYSPEDFLD 152          
BLAST of Gcaud7634.t1 vs. uniprot
Match: A0A7S3AF15_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AF15_9EUKA)

HSP 1 Score: 77.0 bits (188), Expect = 2.640e-15
Identity = 42/150 (28.00%), Postives = 61/150 (40.67%), Query Frame = 0
Query:    1 MMDQNAVAIVATMVAGIGGGIALVAWTENQGKRTELRANIQPCAECGGETTTVCNVCNGSTKDPLDA---------------------------------------------SKLCSYCEGNGSIKCFNCSGSGIQPRFLDRLSPEDFMD 105
            M+D + +     ++ G+GGG+ L+A TE  GKR E + N QPC  C  E    C +C G+ +DP  +                                               +C  C G G +       +G+QPRFL+R SP+DFMD
Sbjct:   44 MIDNSFLVGGGVLLLGLGGGVGLIALTEQAGKRNEAKVNAQPCVVCKVEQIVTCTICQGTGEDPYASLVAGVKAEIGEEGETGKVVVEDWASGPKEVVMYEEILSRYPVKATENVCQNCAGRGVVVXXXXXXTGLQPRFLERYSPDDFMD 193          
BLAST of Gcaud7634.t1 vs. uniprot
Match: A0A0M0J810_9EUKA (Chaperone protein-related protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J810_9EUKA)

HSP 1 Score: 59.3 bits (142), Expect = 1.410e-8
Identity = 24/38 (63.16%), Postives = 28/38 (73.68%), Query Frame = 0
Query:   68 SKLCSYCEGNGSIKCFNCSGSGIQPRFLDRLSPEDFMD 105
            S  C  C+G G I C NC GSG+QPRFL+R SP+DFMD
Sbjct:  150 SGTCINCDGRGVIVCDNCQGSGLQPRFLERYSPDDFMD 187          
BLAST of Gcaud7634.t1 vs. uniprot
Match: A0A7S0IP18_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IP18_9EUKA)

HSP 1 Score: 59.7 bits (143), Expect = 1.550e-8
Identity = 24/43 (55.81%), Postives = 33/43 (76.74%), Query Frame = 0
Query:   64 PLDASK-LCSYCEGNGSIKCFNCSGSGIQPRFLDRLSPEDFMD 105
            P+ A++ +C  C+G G + C NC G+GIQPRFL+R SP+DFMD
Sbjct:  179 PIKATENVCITCDGRGVVVCDNCQGTGIQPRFLERYSPDDFMD 221          
The following BLAST results are available for this feature:
BLAST of Gcaud7634.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3IXM0_9FLOR2.580e-4467.62Protein disulfide-isomerase LQY1, chloroplastic n=... [more]
A0A1X6NIH9_PORUM3.440e-3654.95Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S3U1S3_9SPIT1.910e-2336.91Hypothetical protein (Fragment) n=2 Tax=Choreotric... [more]
A0A7S3W6S8_EMIHU1.310e-1833.12Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A5J4YNM6_PORPP3.740e-1841.12Protein SPA, chloroplastic n=1 Tax=Porphyridium pu... [more]
M2XWY2_GALSU4.900e-1741.49Chaperone protein / DnaJ-related protein n=1 Tax=G... [more]
A0A7S3AF15_9EUKA2.640e-1528.00Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A0M0J810_9EUKA1.410e-863.16Chaperone protein-related protein n=1 Tax=Chrysoch... [more]
A0A7S0IP18_9EUKA1.550e-855.81Hypothetical protein n=2 Tax=Calcidiscus leptoporu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15852:SF27PROTEIN DISULFIDE-ISOMERASE LQY1, CHLOROPLASTICcoord: 2..98
NoneNo IPR availablePANTHERPTHR15852PLASTID TRANSCRIPTIONALLY ACTIVE PROTEINcoord: 2..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..105
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 42..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_240_length_34680_cov_4.545549contigNODE_240_length_34680_cov_4.545549:2871..3287 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7634.t1Gcaud7634.t1Gracilaria caudata M_176_S67 malemRNANODE_240_length_34680_cov_4.545549 2871..3287 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7634.t1 ID=Gcaud7634.t1|Name=Gcaud7634.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=106bp
MMDQNAVAIVATMVAGIGGGIALVAWTENQGKRTELRANIQPCAECGGET
TTVCNVCNGSTKDPLDASKLCSYCEGNGSIKCFNCSGSGIQPRFLDRLSP
EDFMD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036410HSP_DnaJ_Cys-rich_dom_sf