Gcaud7641.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7641.t1
Unique NameGcaud7641.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1836
Homology
BLAST of Gcaud7641.t1 vs. uniprot
Match: A0A2V3IXL8_9FLOR (DNA-directed RNA polymerase subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXL8_9FLOR)

HSP 1 Score: 3004 bits (7789), Expect = 0.000e+0
Identity = 1574/1758 (89.53%), Postives = 1650/1758 (93.86%), Query Frame = 0
Query:    8 YSSAPERRLKAVQFGILGPEEIRRMSVAEIKHEKTYENGLPLVEGTADRRLGANGSQFPCQTCGDYDRTCTGHFGHIELAKPMYNIGFMNTTLKILRCVCHYCSRILCTERAVEDLLKITRPTARMRAAMRATSGTKKVCTARDGCGHTQPKYSRDGFRIRAVFEDSADDSVDRKQTITAERTHAIFKRISDRDCSALGLSPQWSRPEWLILTLMPVPPLAVRPSISRGGLRNEDDLTNKLGDIVKNNNALRVLESTGAVAHTIREQIDLVQYHVATYMNNEIPGVVTATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLKLHEVGVPKTIAQNLTYPEVVTTYNMAEMRKLVVNGPNEYPGAHSVEREDGRKVSLAYIPDRSGVRLEVGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFLERDFVMNLLMHVGDWDGIVPEPTIYKPRPLWTGKQIFSLILPPVNLIRFNKTHPDEENTDISPGDTKVYISRGELVCGIVDKNTVGTSANGLIHVTWKEFGPKVTDTMISQIQVLVNHYVLHRGQSIGIGDTIADEATMRNVIQTIQKAKDDVKDLVRKAQERELTLLPGKGMMESFETEVNKVLNGARDKSGSSAQDSLLKSNNIKRMVSAGSKGSFINISQICACVGQQNVEGKRIAYGFTRRTLPHFVLDDLGPESRGFVENSYLRGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEDIMVRYDGTVRNSCNHIIEFLYGEDGMDATFLEDQNLRTYKMSDKKLEQEFWLDPTDSSFGRDERGRPYLNDDTCDRIRQDAQMHIMLTEEFEQIKRDRGVLREEIVKNGDTKRPLAVNVDRVIWNAKLLHGIRPDSLSTLTPDQIRKGVRMLLKRTRVLVLGDESALEDAAFQYSQEGGNPNVLEGDAGIVDPLAKEAQDNATLLFQIHIRAMLASKKLIVEHRLNDEAFLWILGEIESRFMTSRVAPGENIGAIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKNTKTPSLTVYLKHGLDRDNSKRVQASLQHTSLEDVAQCSEIYFDPDPQTTVVEEDREMVSSYFELEDAPAGVSPWLLRIILDKDMLQDREISMDLVENSIHDTFGNDIHIIRSQDNDEKMVLRLRLQDETTQEKYGDMQMGG-DAM-EDEDQYDDDDSVFLRRLEGNLLQQMNLGGIAGIRKVFMRKSRQTYVDKVSGTFKTKEEWVLDTDGVNLLAVMAHEDVDHTRTLSNDIVEIFEVLGIEAVREALLNEIRGVISFDGAYVNYRHLSILVDVMTYRGHLMAITRHGINRADTGPLMKCSFEETTDILLEAATHGIADHLNGVTENIMLGQMAPVGTGCFKLMLNEKMLQDAIEPKGPVAFAPSPTTNEGYEAGSWTPARVEATPGRRRGADIRATPGNAYSPAAWSTPNRAGSVRGGSPLMSQMSPAADDAQFSPVASPKGPGLGGGATPLQSPGRDYVTPVSPGGVGAASPYATSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGAGNHSSFVPSSPGYSLKSPAAGLSGXXXXXGLVAKYSPTSPGFXXXXXXXXXSAARAAGGGGTGGAAYXXXXXXXNSTAASPXXXXXXXXGLNYSPGTPKAYSPGSPAF 1763
            YSSAPERRLKA+QFGILGPEE+RRMSVAEIKHE+ YENG P VEG ADRRLGANGS FPCQTCG  D++C GHFGHIELAKPMYNIGF+NTTLKILRCVCHYCSRILCT+ AV DLLKITRPTAR+RAA+RATSGTKKVC++ DGCGH QPKYSRDGFRIRAVFEDSAD+SVDRKQTITAER H+IFKR+S+RDC+ALGLS QWSRPEWLILTL+PVPP  VRPS+ RGGLRNEDDLTNKLGDIVKNNNALR+LES GAVAHTIREQIDLVQYHVATYMNNEIPGVV +TVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLKLHEVGVP+TIAQNLTYPEVVTTYNMAEMRKLV NGPNEYPGA  +EREDGRK +LAY+ DRS V+LEVG+KVIRHI+DGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFLERDFVMNLLMHVGDWDG+VPEP IYKP+PLWTGKQIFSL+LPPVNL+RFN THPD+ENTDISPGDTKVYIS+GELVCGI+DK TVGTSANGLIHVTWKEFGP+VTD MISQIQVL+NHYVLHRGQSIGIGDTIADEATMRNVIQTIQ AKDDVKDLVRKAQE+ELTLLPGKGMMESFETEVNKVLNGARDKSGSSAQDSLLKSNNIKRMVSAGSKGSFINISQICACVGQQNVEGKRIAYGFTRRTLPHFVLDDLGPESRGFVENSYLRGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEDIMVRYDGTVRNS NH++EFLYGEDGMDATFLEDQ+LR +KMSDK+LE+E+WLDPTDSSFGRD+ GRPYLNDDTCDRIRQDAQMHIMLTEEFEQIKRDR +LR+EI+KNGD KRPL+VNVDRVIWNAK LH IR DSLSTLTPDQIRKGVRMLLKRTRVLVLGDESALE+AAFQYSQEGGNPNVLEGDAGIVDPLAKEAQ+NATLLFQIHIRAMLA KKLIVEHRLNDEAFLWILGEIESRFMTSRVAPGENIGAIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKNTKTPSLTVYL+ GLD+DNSKRVQASLQHTSLEDVAQCSE+YFDPDPQTTVVEEDREMVSSYFE+ED PAGVSPWLLRI LDKDMLQDR ISMDLVENSIHDTFGND+H+IRSQDNDEKMVLRLRLQDE TQEKYGDMQM G D M E++D Y+DDDSVFLRRLEGNLLQQMNLGGIAGIRKVFMRKSRQTYVD+ +GTFK +EEWVLDTDGVNLLAVMAHED+DHTRT+SNDIVEIFEVLGIEAVREALLNEIRGVISFDGAYVNYRHL+ILVDVMTYRGHLMAITRHG+NRADTGPLMKCSFEETTDILLEAATHG  DHL GVTENIMLGQMAPVGTGCFKLMLNEKML DAIEPKG  A+APSP    GY+AG WTPAR++ATPGR+R  DIRATPGNAYSPAAWSTP+R G+V   SP  SQMSPAADDAQFSPVASPKGPGLGGG TPLQSPGRDYVTPVSPGG GAASPY  SP  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        Y  GNHSSFVPSSPGYSL+SPA     XXXXX   AKYSPTSPG XXXXXXXXX AARAAG    GGAAYXXXXXX NSTAASP XXXXXXX      GTP+AYSPGSPAF
Sbjct:    7 YSSAPERRLKAIQFGILGPEEVRRMSVAEIKHERAYENGQPKVEGVADRRLGANGSNFPCQTCGCDDKSCPGHFGHIELAKPMYNIGFINTTLKILRCVCHYCSRILCTDHAVADLLKITRPTARLRAALRATSGTKKVCSSADGCGHVQPKYSRDGFRIRAVFEDSADESVDRKQTITAERAHSIFKRVSERDCTALGLSHQWSRPEWLILTLLPVPPPPVRPSVMRGGLRNEDDLTNKLGDIVKNNNALRILESNGAVAHTIREQIDLVQYHVATYMNNEIPGVVASTVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLKLHEVGVPRTIAQNLTYPEVVTTYNMAEMRKLVENGPNEYPGAKMIEREDGRKTNLAYLADRSMVQLEVGYKVIRHIRDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFLERDFVMNLLMHVGDWDGVVPEPVIYKPKPLWTGKQIFSLVLPPVNLVRFNITHPDDENTDISPGDTKVYISKGELVCGIIDKKTVGTSANGLIHVTWKEFGPRVTDKMISQIQVLLNHYVLHRGQSIGIGDTIADEATMRNVIQTIQNAKDDVKDLVRKAQEKELTLLPGKGMMESFETEVNKVLNGARDKSGSSAQDSLLKSNNIKRMVSAGSKGSFINISQICACVGQQNVEGKRIAYGFTRRTLPHFVLDDLGPESRGFVENSYLRGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEDIMVRYDGTVRNSVNHVVEFLYGEDGMDATFLEDQSLRVFKMSDKQLEKEYWLDPTDSSFGRDDLGRPYLNDDTCDRIRQDAQMHIMLTEEFEQIKRDRRILRDEIIKNGDPKRPLSVNVDRVIWNAKQLHNIRSDSLSTLTPDQIRKGVRMLLKRTRVLVLGDESALENAAFQYSQEGGNPNVLEGDAGIVDPLAKEAQENATLLFQIHIRAMLACKKLIVEHRLNDEAFLWILGEIESRFMTSRVAPGENIGAIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKNTKTPSLTVYLRPGLDKDNSKRVQASLQHTSLEDVAQCSEVYFDPDPQTTVVEEDREMVSSYFEIEDVPAGVSPWLLRITLDKDMLQDRNISMDLVENSIHDTFGNDLHVIRSQDNDEKMVLRLRLQDEATQEKYGDMQMNGADPMAEEDDDYEDDDSVFLRRLEGNLLQQMNLGGIAGIRKVFMRKSRQTYVDRPTGTFKVREEWVLDTDGVNLLAVMAHEDIDHTRTVSNDIVEIFEVLGIEAVREALLNEIRGVISFDGAYVNYRHLAILVDVMTYRGHLMAITRHGVNRADTGPLMKCSFEETTDILLEAATHGETDHLQGVTENIMLGQMAPVGTGCFKLMLNEKMLLDAIEPKGLAAYAPSPMITGGYDAGGWTPARMDATPGRKR-MDIRATPGNAYSPAAWSTPSRVGTVGAASPFASQMSPAADDAQFSPVASPKGPGLGGGTTPLQSPGRDYVTPVSPGGAGAASPYVVSPGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPGRGTSPYAMGNHSSFVPSSPGYSLRSPAVXXXXXXXXXXTTAKYSPTSPGXXXXXXXXXXXAARAAGAA-AGGAAYXXXXXXYNSTAASPAXXXXXXXXXXXX-GTPRAYSPGSPAF 1761          
BLAST of Gcaud7641.t1 vs. uniprot
Match: R7QLG5_CHOCR (DNA-directed RNA polymerase subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLG5_CHOCR)

HSP 1 Score: 2379 bits (6166), Expect = 0.000e+0
Identity = 1258/1771 (71.03%), Postives = 1426/1771 (80.52%), Query Frame = 0
Query:    8 YSSAPERRLKAVQFGILGPEEIRRMSVAEIKHEKTYENGLPLVEGTADRRLGANGSQFPCQTCGDYDRTCTGHFGHIELAKPMYNIGFMNTTLKILRCVCHYCSRILCTERAVEDLLKITRPTARMRAAMRATSGTKKVCTARDGCGHTQPKYSRDGFRIRAVFEDSADDSVDRKQTITAERTHAIFKRISDRDCSALGLSPQWSRPEWLILTLMPVPPLAVRPSISRGGLRNEDDLTNKLGDIVKNNNALRVLESTGAVAHTIREQIDLVQYHVATYMNNEIPGVVTATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLKLHEVGVPKTIAQNLTYPEVVTTYNMAEMRKLVVNGPNEYPGAHSVEREDGRKVSLAYIPDRSGVRLEVGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFLERDFVMNLLMHVGDWDGIVPEPTIYKPRPLWTGKQIFSLILPPVNLIRFNKTHPDEENTDISPGDTKVYISRGELVCGIVDKNTVGTSANGLIHVTWKEFGPKVTDTMISQIQVLVNHYVLHRGQSIGIGDTIADEATMRNVIQTIQKAKDDVKDLVRKAQERELTLLPGKGMMESFETEVNKVLNGARDKSGSSAQDSLLKSNNIKRMVSAGSKGSFINISQICACVGQQNVEGKRIAYGFTRRTLPHFVLDDLGPESRGFVENSYLRGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEDIMVRYDGTVRNSCNHIIEFLYGEDGMDATFLEDQNLRTYKMSDKKLEQEFWLDPTDSSFGRDERGRPYLNDDTCDRIRQDAQMHIMLTEEFEQIKRDRGVLREEIVKNGDTKRPLAVNVDRVIWNAKLLHGIRPDSLSTLTPDQIRKGVRMLLKRTRVLVLGDESALEDAAFQYSQEGGNPNVLEGDAGIVDPLAKEAQDNATLLFQIHIRAMLASKKLIVEHRLNDEAFLWILGEIESRFMTSRVAPGENIGAIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKNTKTPSLTVYLK--HGLDRDNSKRVQASLQHTSLEDVAQCSEIYFDPDPQTTVVEEDREMVSSYFELEDAPAGVSPWLLRIILDKDMLQDREISMDLVENSIHDTFGNDIHIIRSQDNDEKMVLRLRLQDETTQEKYGDMQMGGDA-MEDEDQYDDDDSVFLRRLEGNLLQQMNLGGIAGIRKVFMRKSRQTYVDKVSGTFKTKEEWVLDTDGVNLLAVMAHEDVDHTRTLSNDIVEIFEVLGIEAVREALLNEIRGVISFDGAYVNYRHLSILVDVMTYRGHLMAITRHGINRADTGPLMKCSFEETTDILLEAATHGIADHLNGVTENIMLGQMAPVGTGCFKLMLNEKMLQDAIEPKGP----VAFAPSPTTNEGYEAGSWTPARVEATPGRRRGADIRATPGNAYSPAAWSTPNRAGSVRGGSPLMSQMSPAADDAQFSPV-ASPKGPGLGGGA-TPLQSPGRDYVTPVSPGGVGAASPYATSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGAGNHSSFVPSSPGYSLKSPAAGLSGXXXXXGLV---AKYSPTSPGFXXXXXXXXXSAARAAGGGGTGGAAYXXXXXXXNSTAASPXXXXXXXXG---LNYSPGTPKAYSPGSPAF 1763
            +S AP R + +VQFG+L P+E+RRMSVAEIK E+ YENG P  EG  D RLG+N + F C TC   D+TC GHFGHIELAKPMYN+GF+NTTLKILRCVC+YCS+ILC +  VE LL++ +P  R+R A+   S  K VC+   GCGH QPKYSR+ FRI+A+ ++S +   + K+T+   + +AIFKRISDRDC A+G SP++SRPEW +++L+PVPP  VRPS+ R G RNEDDLT+KLGDI++NNN L+ LESTGAVAH ++EQ  L+QYHV TYMNNE  GV+ ATV+GG R IKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLKLHEVGVP +IA NLTYPE+VT +N  ++ KLV+ GP+ +PG + +E ED  +V   Y  + + ++L VG KV RHI+DGDYVLFNRQPSLHKMSIMGHRIRV+PYSTFRLNLSVTSPYNADFDGDEMNLHVPQSH TRAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFLERD  MNLLMHVGDWDG++PEP IYKPRPLWTGKQIFSLILP VNL+RFN THPD+ENTDISPGDTKVYISRGELVCGIVDK TVGTSANGLIHVTWK+ G K TD MISQIQVLVNHYVL RGQSIGIGDTIAD ATM NVI+TIQ AK++VK LVRKAQE+EL LLPGKGMMESFETEVNKVLNGARDKSG+SAQ SLLKSNNIKRMVSAGSKGSFINISQICACVGQQNVEGKRIAYGF RRTLPHFVLDDLGPESRGFVENSYLRGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMED+MVRYDGTVRNS NHI+EFLYGEDGMDATFLEDQ LRTYKMSD++L  E++L+P D  FGRD +GRPYL+ +  + +RQDAQ+H+ L  EF QI+ DR  LR EIVKNG+ KRPLAVNVDRVIWNAK  H IRPDS+S L PDQI KGV+ML+KRTRV+VLGDE   E  A +   EG   NV +    +VDP+A+E Q+NATLLFQIH+R+MLA KK+I EHRL  +AF+W+LGEIE+RF++ RVAPGENIGAIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKNTKTPSLTVYLK     D++ +K +QASLQHT+L DV QC+EIY+DPDP  TVV ED EMVSS+FE+ED P   SPWLLRI+LDKDMLQDR ISMD +E  ++  FG+D+H+IRSQDNDE++VLRLR+ DE  ++KYG+   GG+            D+ FL+RLE  LL +MNLGGI+ IRKVFMR+SR TYVD+  G FK++EEWVLDTDGVNL+AVM+HE VDHTRT SNDIVEIFE LGIEAVREAL+NEIRGVISFDGAYVNYRHL+ILVD MTYRGHLMAITRHGINR DTGPLMKCSFEETTDILLEAA  G  DHL GV+ENIMLGQ+ P+GTG FKL+LNE  L+DAIEP+         +P      G+E+G+W+P R  ATPGR+R  D RATPGNAYSPAAW TPNR GS RG SP   Q SP ADDAQFSP+ A+P G G+GGG  TPLQSPGR+YVTP+SPGG  AASPY                          XXXXXXXXXXXXX       YGAG ++ F P+SPGY L SP           G     A+YSPTSPGFXXXXXXXX S A A  G   GGA  XXXXXXX       XXXXX   G   L YSP +P AYS  SP F
Sbjct:    8 WSWAPTRHVDSVQFGVLSPDEVRRMSVAEIKEERLYENGEPKHEGLVDSRLGSN-AHFRCTTCHGDDQTCPGHFGHIELAKPMYNVGFVNTTLKILRCVCYYCSKILCNDANVELLLRVKKPVDRLRKALLTCSKGKSVCSEETGCGHEQPKYSREAFRIKALLKESGETGTESKETLDGSKVYAIFKRISDRDCRAMGFSPEFSRPEWFLVSLLPVPPPHVRPSVMRNGSRNEDDLTSKLGDILRNNNLLKTLESTGAVAHVLKEQEALLQYHVVTYMNNEFAGVIPATVKGGGRNIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLKLHEVGVPISIAMNLTYPEIVTPFNREDLTKLVMRGPHSHPGVNYIESED--RVFSLYFQNPADIQLTVGMKVFRHIRDGDYVLFNRQPSLHKMSIMGHRIRVLPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHLTRAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFLERDLTMNLLMHVGDWDGVIPEPAIYKPRPLWTGKQIFSLILPAVNLVRFNITHPDDENTDISPGDTKVYISRGELVCGIVDKRTVGTSANGLIHVTWKQCGAKTTDKMISQIQVLVNHYVLQRGQSIGIGDTIADTATMSNVIRTIQSAKEEVKLLVRKAQEKELVLLPGKGMMESFETEVNKVLNGARDKSGASAQKSLLKSNNIKRMVSAGSKGSFINISQICACVGQQNVEGKRIAYGFNRRTLPHFVLDDLGPESRGFVENSYLRGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEDVMVRYDGTVRNSVNHIVEFLYGEDGMDATFLEDQFLRTYKMSDRQLRDEYYLNPMDPGFGRDSKGRPYLDTEITEGVRQDAQIHLELKAEFSQIQSDRETLRHEIVKNGEAKRPLAVNVDRVIWNAKQEHNIRPDSVSDLNPDQILKGVKMLMKRTRVIVLGDEDEEEANATRNDDEG---NVEDRKPTLVDPIAREVQENATLLFQIHLRSMLACKKIIKEHRLTKKAFVWVLGEIETRFLSCRVAPGENIGAIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKNTKTPSLTVYLKPEFAADKEKAKEIQASLQHTTLRDVTQCTEIYYDPDPSRTVVAEDEEMVSSFFEIEDVPHAASPWLLRIVLDKDMLQDRSISMDQIERIVYQNFGSDVHVIRSQDNDERIVLRLRVTDEAARDKYGENGNGGEMDXXXXXXXXXSDNAFLKRLESELLSEMNLGGISRIRKVFMRQSRTTYVDESVGRFKSREEWVLDTDGVNLIAVMSHEAVDHTRTTSNDIVEIFEALGIEAVREALMNEIRGVISFDGAYVNYRHLAILVDTMTYRGHLMAITRHGINRVDTGPLMKCSFEETTDILLEAAQFGEKDHLRGVSENIMLGQLPPIGTGSFKLLLNEDKLKDAIEPEAAQEQVAVGSPLGVVGGGFESGAWSPGRPMATPGRKRTFDARATPGNAYSPAAWQTPNRMGSTRGASPFNMQFSPTADDAQFSPMPATPGGAGVGGGGYTPLQSPGREYVTPLSPGG--AASPYHNQ----------------------SXXXXXXXXXXXXXAAGGAGGYGAGANT-FAPASPGYRLTSPGPSAYAMAQSPGAQSPGAQYSPTSPGFXXXXXXXXPSGAVA--GAAAGGAXXXXXXXXXXXXXXXXXXXXXYGGGSASLAYSPSSPAAYSHSSPGF 1745          
BLAST of Gcaud7641.t1 vs. uniprot
Match: O09451_9FLOR (DNA-directed RNA polymerase subunit (Fragment) n=1 Tax=Bonnemaisonia hamifera TaxID=31369 RepID=O09451_9FLOR)

HSP 1 Score: 2359 bits (6114), Expect = 0.000e+0
Identity = 1244/1704 (73.00%), Postives = 1403/1704 (82.34%), Query Frame = 0
Query:   77 CTGHFGHIELAKPMYNIGFMNTTLKILRCVCHYCSRILCTERAVEDLLKITRPTARMRAAMRATSGTKKVCTARDGCGHTQPKYSRDGFRIRAVFEDSADDSVDRKQTITAERTHAIFKRISDRDCSALGLSPQWSRPEWLILTLMPVPPLAVRPSISRGGLRNEDDLTNKLGDIVKNNNALRVLESTGAVAHTIREQIDLVQYHVATYMNNEIPGVVTATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLKLHEVGVPKTIAQNLTYPEVVTTYNMAEMRKLVVNGPNEYPGAHSVEREDGRKVSLAYIPDRSGVRLEVGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFLERDFVMNLLMHVGDWDGIVPEPTIYKPRPLWTGKQIFSLILPPVNLIRFNKTHPDEENTDISPGDTKVYISRGELVCGIVDKNTVGTSANGLIHVTWKEFGPKVTDTMISQIQVLVNHYVLHRGQSIGIGDTIADEATMRNVIQTIQKAKDDVKDLVRKAQERELTLLPGKGMMESFETEVNKVLNGARDKSGSSAQDSLLKSNNIKRMVSAGSKGSFINISQICACVGQQNVEGKRIAYGFTRRTLPHFVLDDLGPESRGFVENSYLRGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEDIMVRYDGTVRNSCNHIIEFLYGEDGMDATFLEDQNLRTYKMSDKKLEQEFWLDPTDSSFGRDERGRPYLNDDTCDRIRQDAQMHIMLTEEFEQIKRDRGVLREEIVKNGDTKRPLAVNVDRVIWNAKLLHGIRPDSLSTLTPDQIRKGVRMLLKRTRVLVLGDESALEDAAFQYSQEG---GNPNVLEGDAGIVDPLAKEAQDNATLLFQIHIRAMLASKKLIVEHRLNDEAFLWILGEIESRFMTSRVAPGENIGAIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKNTKTPSLTVYLK--HGLDRDNSKRVQASLQHTSLEDVAQCSEIYFDPDPQTTVVEEDREMVSSYFELEDAPAGVSPWLLRIILDKDMLQDREISMDLVENSIHDTFGNDIHIIRSQDNDEKMVLRLRLQDETTQEKYGDMQMGGDAMEDEDQYDDDDSVFLRRLEGNLLQQMNLGGIAGIRKVFMRKSRQTYVDKVSGTFKTKEEWVLDTDGVNLLAVMAHEDVDHTRTLSNDIVEIFEVLGIEAVREALLNEIRGVISFDGAYVNYRHLSILVDVMTYRGHLMAITRHGINRADTGPLMKCSFEETTDILLEAATHGIADHLNGVTENIMLGQMAPVGTGCFKLMLNEKMLQDAIEPKG-----PVAFAPSPTTNEGYEAGS-WTPARVEATPGRRRGADIRATPGNAYSPAAWSTPNRAGSVRGGSPLMSQMSPAADDAQFSPVASPKGPG------LGGGATPLQSPGRDYVTPVSPGGVGAASPYATSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGAGNHSSFVPSSPGYSLKSPAAG-LSGXXXXXGLVAKYSPTSPGFXXXXXXXXXSAARAAGGGGTGGAAYXXXXXXXNST-AASPXXXXXXXXGLNYSPGTPKAYSPGSP 1761
            C GHFGH+ELAKPM+NIGF+N +LKILRCVCHYCS++LC+  +V  L KIT+PT RMR AMR TSG KK+CTA  GCGH QPKYSRDGFRIRA+FED+A++S +RKQTITAE+++AIFKRIS+ +C A+GLS +WSRPEWLILTL+PVPP  VRPS+ RGGLRNEDDLTNKLGDIVKNNN LR LE+TGAVAH IREQIDLVQYHVATYMNNE+PG++ ATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNL+LHEVGVP +IA+NLTYPE+VT+YN+ EM+KLV NGP+EYPGA  +EREDG KV+LAY+ +RS ++LE+G+KVIRHI+DGDYVLFNRQPSLHKMSIMGHRIRV+PYSTFRLNLSVTSPYNADFDGDEMNLHVPQ+HQTRAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFLERD +MNLLMHVGDWDG++P+P IYKPRPLWTGKQ+FSLILPPVN+IRFN THPD+E TDISPGDTKVYISRG+L+CGIVDK TVG+SANGLIH+TWKEFGPK+TDT+ISQIQVLVNHY+L R QSIGIGDTIAD+ATMRNVI TIQ AK++VK LVRKAQE+EL LLPGKGMMESFETEVNKVLNGARDKSG+SAQ SLLKSNNIKRMVSAGSKGSFINISQICACVGQQNVEGKRIAYGF RRTLPHFVLDDLGPESRGFVENSYLRGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEDIMVRYDGTVRNSCNHI+EFLYGED MDATFLEDQ +RT KMSDKKL  E+++DP+D  FG+DE+GRPYL+ +  +R+RQDA +H+ L  EF+QI+ DR +LR+ I+K G++KRPLAVNVDRVIWNAK  H I  DS+S L PDQ+ KGV MLLKRTRVLVLGDE+ALE+AA +   E    GNP  ++    +VDPL KEAQ+NATLLFQIH+R+MLA KKLI  HRL  +AFLW+LGE+E+RFM  RVAPGENIGAIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKNTKTPSLTVYLK  +  D++ +K +QASLQHT+L DV QC+EIY+DPDP  TVV+ DREMVSS+F+LE+AP GVSPWLLRII+DKDMLQDR+ISMD +EN I   FGND+H+IRSQDNDEKMV+RLR+ DE+ QEK G+ + G D  ED     DD   FLRRLE  LL QMNLGGI  IRKVFMR+SR T+VD  +GT K++EEWVLDTDGVNLLAVM+HE VDHTRT SNDIVEIFEVLGIEAVRE LLNEIRGVISFDGAYVNYRHL+ILVD MTYRGHLMAITRHG+NR DTGPLMKCSFE TTDILLEAA  G  D L GVTENIMLGQ+AP+GTG F+L+LNEKML+DAIEP+       +    SP  N  YE  S W+PAR +ATPGR++  D RATPG  YSPAAW TP R  + +G   L  QMSP+AD A FSP   P  PG           TPLQSPGR+Y  P+SPGG G +  Y+ S                    XXXXXXXXXXXXXXXXXXX    YG G+  +F P+SP Y   SP     +          +YSP              +A  AAGGG +   +Y       N   AASP        G NY   +P  YSP SP
Sbjct:    2 CPGHFGHVELAKPMFNIGFINISLKILRCVCHYCSKLLCSSASVAILHKITKPTDRMRTAMRFTSGAKKLCTAEGGCGHMQPKYSRDGFRIRAIFEDTAEESAERKQTITAEKSYAIFKRISNSECEAMGLSWRWSRPEWLILTLLPVPPPQVRPSVMRGGLRNEDDLTNKLGDIVKNNNTLRNLEATGAVAHAIREQIDLVQYHVATYMNNELPGIMPATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLRLHEVGVPFSIARNLTYPEIVTSYNIDEMQKLVENGPDEYPGAKYIEREDGFKVNLAYVRNRSELQLELGYKVIRHIRDGDYVLFNRQPSLHKMSIMGHRIRVLPYSTFRLNLSVTSPYNADFDGDEMNLHVPQTHQTRAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFLERDLMMNLLMHVGDWDGVIPKPAIYKPRPLWTGKQVFSLILPPVNIIRFNITHPDDEKTDISPGDTKVYISRGQLICGIVDKRTVGSSANGLIHITWKEFGPKITDTLISQIQVLVNHYILQRRQSIGIGDTIADDATMRNVIDTIQGAKEEVKLLVRKAQEKELVLLPGKGMMESFETEVNKVLNGARDKSGASAQRSLLKSNNIKRMVSAGSKGSFINISQICACVGQQNVEGKRIAYGFHRRTLPHFVLDDLGPESRGFVENSYLRGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEDIMVRYDGTVRNSCNHIVEFLYGEDSMDATFLEDQVIRTAKMSDKKLRDEYFIDPSDPKFGQDEKGRPYLDPNIVERVRQDAALHVELRLEFQQIEADRKLLRDYIIKTGESKRPLAVNVDRVIWNAKQEHNIHADSVSDLKPDQVLKGVSMLLKRTRVLVLGDEAALENAALEPGMEEDDEGNP--IDEKPTMVDPLMKEAQENATLLFQIHMRSMLACKKLIQLHRLTFKAFLWLLGEVENRFMMCRVAPGENIGAIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKNTKTPSLTVYLKSQYAGDKEKAKEIQASLQHTTLHDVTQCTEIYYDPDPMDTVVDADREMVSSFFDLEEAPVGVSPWLLRIIMDKDMLQDRKISMDRIENMITQNFGNDVHVIRSQDNDEKMVMRLRVADESAQEKCGE-EGGADIEEDXXXXSDD--TFLRRLESELLSQMNLGGIPAIRKVFMRQSRFTFVDPGTGTHKSREEWVLDTDGVNLLAVMSHEAVDHTRTTSNDIVEIFEVLGIEAVREVLLNEIRGVISFDGAYVNYRHLAILVDTMTYRGHLMAITRHGVNRVDTGPLMKCSFEGTTDILLEAAMWGERDGLRGVTENIMLGQLAPIGTGSFRLLLNEKMLKDAIEPESIDAQASMGLGQSPAGNRTYEGASVWSPARGDATPGRKKAFDARATPGLLYSPAAWGTPLRPRTEQG---LDQQMSPSADGAAFSPT--PMTPGGXXXXXXXXXLTPLQSPGREYTVPLSPGGGGTSPFYSQS--------------------XXXXXXXXXXXXXXXXXXXGAGAYGIGSSGTFAPASPAYRPTSPGPSPYAAQSPAQSPGVQYSPDKS--RVQVQRAPPTAPSAAGGGAS--RSYSPSSPSYNGRGAASP--------GANYVAASP-GYSPSSP 1662          
BLAST of Gcaud7641.t1 vs. uniprot
Match: Q9AXN1_9FLOR (DNA-directed RNA polymerase subunit (Fragment) n=1 Tax=Botryocladia uvarioides TaxID=145666 RepID=Q9AXN1_9FLOR)

HSP 1 Score: 2212 bits (5732), Expect = 0.000e+0
Identity = 1145/1651 (69.35%), Postives = 1314/1651 (79.59%), Query Frame = 0
Query:   77 CTGHFGHIELAKPMYNIGFMNTTLKILRCVCHYCSRILCTERAVEDLLKITRPTARMRAAMRATSGTKKVCTARDGCGHTQPKYSRDGFRIRAVFEDSADD--SVDRKQTITAERTHAIFKRISDRDCSALGLSPQWSRPEWLILTLMPVPPLAVRPSISRGGLRNEDDLTNKLGDIVKNNNALRVLESTGAVAHTIREQIDLVQYHVATYMNNEIPGVVTATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLKLHEVGVPKTIAQNLTYPEVVTTYNMAEMRKLVVNGPNEYPGAHSVEREDGRKVSLAYIPDRSGVRLEVGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFLERDFVMNLLMHVGDWDGIVPEPTIYKPRPLWTGKQIFSLILPPVNLIRFNKTHPDEENTDISPGDTKVYISRGELVCGIVDKNTVGTSANGLIHVTWKEFGPKVTDTMISQIQVLVNHYVLHRGQSIGIGDTIADEATMRNVIQTIQKAKDDVKDLVRKAQERELTLLPGKGMMESFETEVNKVLNGARDKSGSSAQDSLLKSNNIKRMVSAGSKGSFINISQICACVGQQNVEGKRIAYGFTRRTLPHFVLDDLGPESRGFVENSYLRGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEDIMVRYDGTVRNSCNHIIEFLYGEDGMDATFLEDQNLRTYKMSDKKLEQEFWLDPTDSSFGRDERGRPYLNDDTCDRIRQDAQMHIMLTEEFEQIKRDRGVLREEIVKNGDTKRPLAVNVDRVIWNAKLLHGIRPDSLSTLTPDQIRKGVRMLLKRTRVLVLGDESALEDAAFQYSQEGGNPNVLEGDAGIVDPLAKEAQDNATLLFQIHIRAMLASKKLIVEHRLNDEAFLWILGEIESRFMTSRVAPGENIGAIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKNTKTPSLTVYL--KHGLDRDNSKRVQASLQHTSLEDVAQCSEIYFDPDPQTTVVEEDREMVSSYFELEDAPAGVSPWLLRIILDKDMLQDREISMDLVENSIHDTFGNDIHIIRSQDNDEKMVLRLRLQDETTQEKYGDMQMGGDAMEDEDQYDDD-----DSVFLRRLEGNLLQQMNLGGIAGIRKVFMRKSRQTYVDKVSGTFKTKEEWVLDTDGVNLLAVMAHEDVDHTRTLSNDIVEIFEVLGIEAVREALLNEIRGVISFDGAYVNYRHLSILVDVMTYRGHLMAITRHGINRADTGPLMKCSFEETTDILLEAATHGIADHLNGVTENIMLGQMAPVGTGCFKLMLNEKMLQDAIEPKGPVAFAPSPTTNEGYEAG---SWTPARVEATPGRRRGADIRATPG--NAYSPAAWSTPNRAGSVRGGSPLMS--QMSPAADDAQFSPVASPKGPGLGG----GATPLQSPGRDYVTPVSPGGV---------GAASPYATSPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGAGNHSSFVPSSPGYSLKSPAAGLSGXXXXXGLV---AKYSPTSP 1695
            C GHFGHIELAKPMYNIGF+ TTL +LRCVCH+CS+ILC +  V+ LLKI++PT R+R AM+  SGTKK+CT  + CG+ QPKY+R+GFRIR  F+D+ ++    ++K +++AE+ + IFKRISDRD  ALGL P+W RPE LILT++PVPPL VRPS+  GGLRNEDDLTNKLGDIVKNNN LR +E+ G VAH +REQ+DLVQYHVATYMNNEIPGV  ATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNL LHEVGVP +IA+NLT+PE VT+YN AEMRKLV NGP EYPGA  +ER+DG+KV+L+Y+ DR+   LE+GFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRV+PYSTFRLNLSVTSPYNADFDGDEMNLHVPQSH TRAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDTF+ERD +MNLLMHVGDWDG+VPEP IYKPRPLWTGKQIFSLILPPVNLIR+N THPDEE  +ISPGDTKVYIS+G+L+CGIVDK TVG+SANGLIHVTWKE GPKVT  MISQIQVLVNHYVL RGQSIGIGDTIAD+ TM NVI TI+ AK++VK L++KAQ +EL LLPGKGMMESFETEVNKVLNGARDKSG+SAQ SLLKSNNIKRMVSAGSKGSFINISQICACVGQQNVEGKRIAYGF  RTLPHF  DDLGPESRGFVENSYLRGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMED+MVRYDGTVRNS NH++EFLYGEDGMDAT LEDQ LRT KMSD++L  E++LDPTD+ FG+D RGRPYL+ +TCD IRQDAQ HI+L  EF++I+ DR +LR  I K+G+ KRP+AVN+DR+IWNAK  H IRPDS+S LTP Q+ KG++MLLKRTRV+ +GD+   ED     + E G    +     + DPL  E Q+NAT++FQIH+R+MLA K+++V HRL+  AFLWILGEIE+RF+ +  APGENIGAIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINVSK+TKTPSLTVYL  K+  D+  +K +QASLQ T+L DV   + IY+DPDP+TTV+EEDREMV S++E+ED P+ V+PWLLRI LDK++L DR I MD +EN +   FG+DIHI+RS DNDE++V+RLR+ DE    KY +     + ++     DD+     D  FLR LE  LL +M LGGI  I KVFMR++++ Y+DK  G +KT EEWVLDTDGVNL AVM HE VDHTRT+SNDIVEIFE LGIEAVREALL EIRGVISFDGAYVNYRHLSILVDVMTYRGHLMAITRHGINR DTGPLMKCSFEETTDILLEAAT G+ D+L GV+ENI+LGQ+APVGTG FK+MLNEKMLQ AIE +     A     ++        +W+PAR +ATPG  R  D R TPG    Y+P  W+ P+R GS RGG    +  Q SP+AD+A FSP  SP  PG  G      TPLQSP  DY+ P+SPGG          G ASPYATSPA                                         Y AG  S F P+SP Y + SPA G  G           A+YSPTSP
Sbjct:    1 CPGHFGHIELAKPMYNIGFIKTTLSVLRCVCHFCSKILCPDATVQSLLKISKPTVRLRNAMKYCSGTKKICTGDNSCGNLQPKYTREGFRIRQQFDDNHEEYSKENKKPSLSAEKVYDIFKRISDRDSLALGLDPRWVRPENLILTVLPVPPLQVRPSVMHGGLRNEDDLTNKLGDIVKNNNMLRDMEAQGTVAHLLREQLDLVQYHVATYMNNEIPGVSQATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLLLHEVGVPYSIAKNLTFPETVTSYNYAEMRKLVENGPTEYPGAKYIERDDGQKVNLSYVADRTSTNLEIGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVLPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHGTRAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFIERDVMMNLLMHVGDWDGVVPEPAIYKPRPLWTGKQIFSLILPPVNLIRYNITHPDEEQEEISPGDTKVYISQGQLICGIVDKKTVGSSANGLIHVTWKECGPKVTAMMISQIQVLVNHYVLQRGQSIGIGDTIADDDTMSNVINTIKGAKEEVKMLIKKAQMKELVLLPGKGMMESFETEVNKVLNGARDKSGASAQKSLLKSNNIKRMVSAGSKGSFINISQICACVGQQNVEGKRIAYGFNGRTLPHFATDDLGPESRGFVENSYLRGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEDVMVRYDGTVRNSANHVVEFLYGEDGMDATLLEDQTLRTLKMSDERLFDEYYLDPTDAKFGKDSRGRPYLDWETCDSIRQDAQAHILLRNEFQRIREDRDLLRNFIAKSGEAKRPMAVNIDRIIWNAKQAHNIRPDSVSDLTPVQVWKGIKMLLKRTRVVEIGDDQDDEDVDDGVTDENGE---MIDRKPVADPLTLETQENATMIFQIHVRSMLACKQVMVRHRLDINAFLWILGEIENRFLGAIAAPGENIGAIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVSKHTKTPSLTVYLRDKYSKDKGKAKEIQASLQATNLYDVTTSTAIYYDPDPETTVIEEDREMVHSFYEVEDVPSDVAPWLLRITLDKEILIDRGIGMDHIENMMQQNFGDDIHIVRSTDNDERLVIRLRVHDEGANIKYAEDGRREEGIDTGMDIDDEXXXXTDDAFLRTLESELLNKMPLGGIKDIHKVFMRQAKRQYIDKEYGKYKTDEEWVLDTDGVNLKAVMCHEAVDHTRTMSNDIVEIFETLGIEAVREALLQEIRGVISFDGAYVNYRHLSILVDVMTYRGHLMAITRHGINRVDTGPLMKCSFEETTDILLEAATFGMRDNLQGVSENIVLGQLAPVGTGSFKMMLNEKMLQQAIETEPAQQDAADGAMDQSGTNSFDMAWSPARGDATPGLHRPMDGRTTPGLRTGYTPM-WA-PSRMGSTRGGPSAFNVQQFSPSADEASFSP--SPATPGNFGQNANAYTPLQSPRGDYMPPMSPGGAASPYVSASPGRASPYATSPAYPQSPGS----------------------------------YNAG--SGFAPASPAYKVTSPAPGGYGGAYQSPARSPGAQYSPTSP 1608          
BLAST of Gcaud7641.t1 vs. uniprot
Match: Q9AXN0_9RHOD (DNA-directed RNA polymerase subunit n=1 Tax=Glaucosphaera vacuolata TaxID=38265 RepID=Q9AXN0_9RHOD)

HSP 1 Score: 1842 bits (4771), Expect = 0.000e+0
Identity = 961/1549 (62.04%), Postives = 1177/1549 (75.98%), Query Frame = 0
Query:    8 YSSAPERRLKAVQFGILGPEEIRRMSVAEIKHEKTYENGLPLVEGTADRRLGANGSQFPCQTCGDYDRTCTGHFGHIELAKPMYNIGFMNTTLKILRCVCHYCSRILCTER------AVEDLLKITRPTARMRAAMRATSGTKKVCTARDGCGHTQPKYSRDGFRIRAVFEDSADDSVDRKQTITAERTHAIFKRISDRDCSALGLSPQWSRPEWLILTLMPVPPLAVRPSISR-GGLRNEDDLTNKLGDIVKNNNALRVLESTGAVAHTIREQIDLVQYHVATYMNNEIPGVVTATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLKLHEVGVPKTIAQNLTYPEVVTTYNMAEMRKLVVNGPNEYPGAHSVEREDGRKVSLAYIPDRSGVRLEVGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFLERDFVMNLLMHVGDWDGIVPEPTIYKPRPLWTGKQIFSLILPPVNLIRFNKTHPDEENTDISPGDTKVYISRGELVCGIVDKNTVGTSANGLIHVTWKEFGPKVTDTMISQIQVLVNHYVLHRGQSIGIGDTIADEATMRNVIQTIQKAKDDVKDLVRKAQERELTLLPGKGMMESFETEVNKVLNGARDKSGSSAQDSLLKSNNIKRMVSAGSKGSFINISQICACVGQQNVEGKRIAYGFTRRTLPHFVLDDLGPESRGFVENSYLRGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEDIMVRYDGTVRNSCNHIIEFLYGEDGMDATFLEDQNLRTYKMSDKKLEQEFWLDPTDSSFGRDERGRPYLNDDTCDRIRQDAQMHIMLTEEFEQIKRDRGVLREEIVKNGDTKRPLAVNVDRVIWNAKLLHGIRPDSLSTLTPDQIRKGVRMLLKRTRVLVLGDESALEDAAFQYSQEGGNPNVLEGDAGIVD-PLAKEAQDNATLLFQIHIRAMLASKKLIVEHRLNDEAFLWILGEIESRFMTSRVAPGENIGAIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKNTKTPSLTVYLKHGLDRD--NSKRVQASLQHTSLEDVAQCSEIYFDPDPQTTVVEEDREMVSSYFEL---EDAPAGVSPWLLRIILDKDMLQDREISMDLVENSIHDTFGNDIHIIRSQDNDEKMVLRLRLQDETTQEKYGDMQMGGDAMEDEDQYDDDDSVFLRRLEGNLLQQMNLGGIAGIRKVFMRKSRQTYVDKVSGTFKTKEEWVLDTDGVNLLAVMAHEDVDHTRTLSNDIVEIFEVLGIEAVREALLNEIRGVISFDGAYVNYRHLSILVDVMTYRGHLMAITRHGINRADTGPLMKCSFEETTDILLEAATHGIADHLNGVTENIMLGQMAPVGTGCFKLMLNEKMLQDAI----EPKGPVAFAPSPT----TNEGYEAGSWTPARVEATPGRRRGADIRATPGNAYSP 1535
            YSSA  +++KAVQFG+L P+EIRRMSV EIK E  +E G P  EG  D RLGA G   PC+TC   ++ C GHFGHIEL KPM+NIGF   TL++LRCVC +CS++L   R       V+ +L+I     R++      S  K +C     C + QPK++++G + RA F+ SADD++++KQ ++AE+  +IFK ISD D   +GLSPQ SRPEW ILTL PVPP  +RPS+     +R EDDLT KLGDIV+NNNALR +E TGA AH + EQI ++Q H+ T MNN++PG+  A  + G R IKSI QR KGKEGRVRGNLMGKRVDFS RTVI+PDPNL+L +VGVP+TIA NLTYPEVVT +N+ +MR+LV+NGPNEYPGA  +ER DG KV+LA++ +RS + L  G KVIRH+ DGDYV+FNRQPSLHKMSIMGHR++VM YS+FRLNLS TSPYNADFDGDEMNLHVPQS Q RAEV +LM+VP CIVSPQGNKPVMGIVQDTL+G MLFTQRDTF+E+D VMNLL+H   WDG++P P I KPR LWTGKQ+FS+ILP VNL+RF+ TH D++  +   GDTKV ISRGEL+ G VDK TVG++AN L+HVTWKE GP+    +IS IQ LVNH++L RG SIGIGDTIADE T  NVI+ I KAK++VK LVRKAQE EL LLPGK MMESFET VNKVLNGARDKSGS AQ SLLK+NNIKRMV+AGSKGSFINISQICACVGQQNVEGKRI+YGF RRTLPHFVLDDLGPESRGFVENSYLRGLT +EFFFHAMGGREGLIDTAVKT+ETGYIQRRLIKA+ED+MV+YDGTVRNS   I++FLYGEDGMD   +EDQNLRT  M+D KLEQ F LDP D  FG  E  R YL  +  D +R D Q+   L +EF QIK DR  L+ EI+++ ++K PLAVN+DR+IWN K L  IR DS+S L P  I KGV++LL R  V+ L  +S       +   EG    V E D   V   LA EAQ+NATLL+ IHIRA LASK ++ E+RL+ +AF+ +LGEIE+RF+ ++  PGE IGA+A QSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLKEIINV+K+ KTPSLTVYL+    RD   +K+VQA LQHT+L  V Q +EIY+DP+PQ TV+E D+E+V SY+EL   E++ A +SPWLLR+ L K+M+ DR++SM+ V+N IH   G D++++ S+DND  +VLR+R+  +   EK   M  G +  ++E++   D+ +FLR++EG+LL +MNLGG+  I+KV+MR++ +   D  +G    ++EWVLDTDG NLLAVM+H+DVD+TRT+SND+VE+F  LGIE VR ALLNEIRGVISFDGAYVNYRHL+IL D+MT RGH+M+ITRHGINR +TG LM+CSFEET DILLEAA +G  D + GV ENIMLGQMAPVGTG F L+LNEK L++ I    + + P A   SP     T   ++AGS TP    ATPG+       ATP   Y+P
Sbjct:    9 YSSAEVKKVKAVQFGVLSPDEIRRMSVCEIKFETAFEMGKPKTEGLMDPRLGAIGRDLPCKTCHCDEKNCPGHFGHIELVKPMFNIGFFGMTLRVLRCVCFFCSKLLIDPRDPKADFEVKKVLRIKNRINRLKKVQNLCSKVK-ICKH---CSNEQPKFAKEGLQFRAEFKGSADDTMEKKQIVSAEKVLSIFKHISDDDIEIMGLSPQHSRPEWFILTLFPVPPPHIRPSVMMDASMRGEDDLTYKLGDIVRNNNALREMERTGAPAHRLNEQIHVLQAHIITIMNNDLPGMPRAHQKSG-RPIKSISQRLKGKEGRVRGNLMGKRVDFSGRTVISPDPNLRLDQVGVPQTIAMNLTYPEVVTPFNVEKMRRLVMNGPNEYPGAKYIERLDGSKVNLAFVKNRSDIHLNNGEKVIRHLLDGDYVIFNRQPSLHKMSIMGHRVKVMRYSSFRLNLSCTSPYNADFDGDEMNLHVPQSPQARAEVMQLMMVPRCIVSPQGNKPVMGIVQDTLVGTMLFTQRDTFMEKDLVMNLLLHFRGWDGVIPPPAILKPRQLWTGKQLFSMILPDVNLVRFSNTHDDDDIENA--GDTKVLISRGELLSGTVDKRTVGSAANSLVHVTWKEHGPEGACDLISNIQTLVNHWLLQRGFSIGIGDTIADEQTRFNVIEIINKAKEEVKRLVRKAQEGELQLLPGKTMMESFETGVNKVLNGARDKSGSDAQKSLLKTNNIKRMVNAGSKGSFINISQICACVGQQNVEGKRISYGFRRRTLPHFVLDDLGPESRGFVENSYLRGLTATEFFFHAMGGREGLIDTAVKTSETGYIQRRLIKALEDVMVKYDGTVRNSTGLIVQFLYGEDGMDGAMVEDQNLRTLSMNDAKLEQTFHLDPFDLDFGIGENRRSYLAQEVIDDVRNDPQLIKALEDEFAQIKLDRDRLQREIIRSRESKWPLAVNIDRLIWNVKTLFNIRQDSVSDLNPRDILKGVQILLSRCNVVALPPKS------IKLLDEGDGDQVAEVDTNSVSRQLAVEAQENATLLWSIHIRAFLASKVILKEYRLDKKAFMHLLGEIENRFLHAKCPPGEMIGAVAPQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINVAKHCKTPSLTVYLRGEAARDAERAKQVQAELQHTTLNHVTQSTEIYYDPNPQDTVIEADQELVRSYYELPDDENSSANLSPWLLRLNLSKEMMTDRKLSMNHVKNKIHHDLGGDVNVMASEDNDANLVLRIRIAAQKEPEK---MAEGEEHAQEEEE---DECLFLRKVEGSLLSEMNLGGVPDIKKVYMREADRIVPDPRTGGLSVEKEWVLDTDGTNLLAVMSHKDVDYTRTVSNDVVEMFVTLGIEGVRAALLNEIRGVISFDGAYVNYRHLAILADIMTCRGHIMSITRHGINRVETGALMRCSFEETADILLEAAMYGEVDDMKGVAENIMLGQMAPVGTGEFGLLLNEKALKNLITAEEDARTPRAGLMSPAHGFDTPRAFDAGSMTP--YPATPGQ-------ATPSYPYTP 1529          
BLAST of Gcaud7641.t1 vs. uniprot
Match: A0A5J4YJT1_PORPP (DNA-directed RNA polymerase subunit n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJT1_PORPP)

HSP 1 Score: 1814 bits (4699), Expect = 0.000e+0
Identity = 945/1521 (62.13%), Postives = 1154/1521 (75.87%), Query Frame = 0
Query:    8 YSSAPERRLKAVQFGILGPEEIRRMSVAEIKHEKTYENGLPLVEGTADRRLGANGSQFPCQTCGDYDRTCTGHFGHIELAKPMYNIGFMNTTLKILRCVCHYCSRILCTERAV--EDLLKITRPTARMRAAMRATSGTKKVCTARDGCGHTQPKYSRDG-FRIRAVFEDSADDSVDRKQTITAERTHAIFKRISDRDCSALGLSPQWSRPEWLILTLMPVPPLAVRPSISRGG-LRNEDDLTNKLGDIVKNNNALRVLESTGAVAHTIREQIDLVQYHVATYMNNEIPGVVTATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLKLHEVGVPKTIAQNLTYPEVVTTYNMAEMRKLVVNGPNEYPGAHSVEREDGRKVSLAYIPDRSGVRLEVGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFLERDFVMNLLMHVGDWDGIVPEPTIYKPRPLWTGKQIFSLILPPVNLIRFNKTHPDEENTDISPGDTKVYISRGELVCGIVDKNTVGTSANGLIHVTWKEFGPKVTDTMISQIQVLVNHYVLHRGQSIGIGDTIADEATMRNVIQTIQKAKDDVKDLVRKAQERELTLLPGKGMMESFETEVNKVLNGARDKSGSSAQDSLLKSNNIKRMVSAGSKGSFINISQICACVGQQNVEGKRIAYGFTRRTLPHFVLDDLGPESRGFVENSYLRGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEDIMVRYDGTVRNSCNHIIEFLYGEDGMDATFLEDQNLRTYKMSDKKLEQEFWLDPTDSSFGRDERGRPYLNDDTCDRIRQDAQMHIMLTEEFEQIKRDRGVLREEIVKNGDTKRPLAVNVDRVIWNAKLLHGIRPDSLSTLTPDQIRKGVRML---------LKRTRVLVLGDESALEDA-----AFQYSQEGGNPNVLEGDAGI-----VDPLAKEAQDNATLLFQIHIRAMLASKKLIVEHRLNDEAFLWILGEIESRFMTSRVAPGENIGAIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKNTKTPSLTVYLKHGLDRDN--SKRVQASLQHTSLEDVAQCSEIYFDPDPQTTVVEEDREMVSSYFELEDAP--AGVSPWLLRIILDKDMLQDREISMDLVENSIHDTFGNDIHIIRSQDNDEKMVLRLRLQDETTQEKY--------GDMQMGGD----AMEDEDQYDDDDSVFLRRLEGNLLQQMNLGGIAGIRKVFMRKSRQTYVDKVSGTFKTKEEWVLDTDGVNLLAVMAHEDVDHTRTLSNDIVEIFEVLGIEAVREALLNEIRGVISFDGAYVNYRHLSILVDVMTYRGHLMAITRHGINRADTGPLMKCSFEETTDILLEAATHGIADHLNGVTENIMLGQMAPVGTGCFKLMLNEKMLQDAIEPKG 1489
            YSSA  +++  VQFG+LGP+EIRRMSV EIK E  +E G+P V+G  D+RLGA G  FPC+TC   +  C GHFGHIE  KP+++ GF   T+++L+ VC YCSR+  +++    E   +I + ++R++A  +   G  K C   +GCG  QPK+S++G  +IRA F D+ +D+ DRKQ ITAER  +IFK+ISD D   LGL P+++RPE+L+L+  PVPP  VRPSI     +R EDDLT+KLGDIVKNNNALR LE  GA  H I EQIDL+QYHVATYMNNE+PG+  A  +GG R IKSI QR KGKEGRVRGN+MGKRV+FSARTVIT DPNL L EVGVPKTIA NLTYPEVVT +N  EM +LVVNGP+EYPGA  V R+DG ++ LAY  +RS   L+ G KV+RHI+DGD V+FNRQPSLHKMSIMGHR+RV+PYSTFRLNLSVTSPYNADFDGDEMN+HVPQS  TRAE+ ELM+VP CIVSPQGNKPVMGIVQD+LL CMLFTQRDTF ERDFV NLL+HV  WDG+VP   I  P+PLWTGKQ+FSLILP VNLIRF+ THPD+E+T +SPGDTKV IS+GEL+ GIVDK TVG +   LIHVTWKE GP+VT  +IS IQVLVNH++LHRG SIGIGD +AD+ATM  VIQTI+ +K +V +L+ K    EL  LPGK MME+FE EVNKVLNGARDKSGS AQ SLL SNN+KRMV+AGSKGSFINISQICACVGQQNVEGKRIAYGFTRRTLPHF  DDLGPESRGFVENSYLRGLTP+EFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMED+MVRYDGTVRNS   +I+FLYGEDG+D + +E Q L + ++ D   E  F L  +D  FG    GRPYL  +  D +R D ++      EF++++ DR +LR+EI K+G+ K PLAVNVDRV+WNAK    I  +++S L+P ++   V  L         LK+ R++   DE   ED      A +  +E G+ + +     +     +  LAKEAQ+NATLLF+IH+RAML +K+LIV+HRL+  AF W+LGEI++RF  +RV PGE IGA+AAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRLKEIIN++KN KTPSLTV+LK    RD   +K+VQA LQHT+L  V +C+EI+FDPDP+ TV+  D+EMVS ++E ED    + +SPW+LRI + K  L DR++SM L++N I D F  D+H++ S++N E +VLR+RL   +T  K         G+M  GG+    A  D D+ D D+ +FLR++E  LL    LGGI  I+KVFMR+   + +D+ +G F T +EWVLDTDGVNLL VMAHEDVDHTRT+SND+VE+FEVLG+EAVR ALLNE+R VISFDGAYVNYRHL IL DVMTYRGHLM+ITRHGINRADTGP+M+ +FEETT+ILL+AA +   D L GV+ENI+LGQ+A +GTG F L L E    D +  KG
Sbjct:    9 YSSAETKKVGLVQFGVLGPDEIRRMSVVEIKVETAFEAGIPKVDGLMDQRLGAIGRDFPCETCACDESNCAGHFGHIEFTKPVFHPGFFGVTMRVLKSVCFYCSRLKGSKKDAKFERASRIQKRSSRLQAISKLCEGKSK-CDPEEGCGAVQPKFSKEGALKIRAEFVDAPEDTADRKQIITAERVLSIFKQISDSDADVLGLDPRYTRPEYLVLSAFPVPPPPVRPSIMMDATMRGEDDLTHKLGDIVKNNNALRHLELNGAPLHRINEQIDLLQYHVATYMNNEMPGLPRAEQKGG-RPIKSINQRLKGKEGRVRGNIMGKRVNFSARTVITADPNLMLDEVGVPKTIAMNLTYPEVVTRFNYEEMMRLVVNGPDEYPGAKYVVRDDGTQIDLAYYRNRSDFDLQYGMKVVRHIRDGDCVMFNRQPSLHKMSIMGHRVRVLPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSTLTRAEILELMMVPRCIVSPQGNKPVMGIVQDSLLACMLFTQRDTFFERDFVFNLLLHVKGWDGVVPTSAILLPKPLWTGKQLFSLILPDVNLIRFSNTHPDDEDTPMSPGDTKVLISKGELISGIVDKRTVGAAPGSLIHVTWKELGPQVTCELISNIQVLVNHFILHRGFSIGIGDAVADDATMDRVIQTIESSKAEVDELIVKTTNGELETLPGKTMMETFEAEVNKVLNGARDKSGSYAQKSLLPSNNVKRMVTAGSKGSFINISQICACVGQQNVEGKRIAYGFTRRTLPHFHKDDLGPESRGFVENSYLRGLTPTEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEDLMVRYDGTVRNSVGDVIQFLYGEDGLDGSRVEGQTLSSLRLPDHAFEDRFRLSVSDPHFGS-HHGRPYLPPNMIDELRDDPEVKAACEAEFKRLQLDRAILRKEISKSGEPKWPLAVNVDRVLWNAKRRFSIGQNAVSDLSPKEVIDSVTSLCEKCVIIEDLKKRRIV---DEQTREDVEDPNWALEEDEEPGDVDAVTLTRRMKVFADMQVLAKEAQENATLLFRIHLRAMLCAKELIVKHRLSRVAFQWVLGEIQNRFTHARVHPGEMIGAVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLKEIINIAKNPKTPSLTVFLKEHAARDTEKAKQVQAELQHTTLVHVVKCTEIFFDPDPRNTVIRADQEMVSMFYEFEDDEDASKLSPWVLRIEVSKVSLMDRKLSMRLLKNKIVDVFAGDLHVMSSEENAENLVLRIRLPKTSTLHKQENVDGVEEGEMGDGGEQAVVAPGDLDEADMDE-LFLRKVEAVLLGDFTLGGIPSIKKVFMREPNISVIDESTGAFCTGKEWVLDTDGVNLLTVMAHEDVDHTRTMSNDVVEMFEVLGVEAVRAALLNEVRNVISFDGAYVNYRHLGILCDVMTYRGHLMSITRHGINRADTGPIMRATFEETTEILLDAAMYAERDRLRGVSENILLGQLANLGTGSFGLFLQES---DVVGIKG 1519          
BLAST of Gcaud7641.t1 vs. uniprot
Match: A0A7S3EQ85_9RHOD (DNA-directed RNA polymerase subunit n=6 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EQ85_9RHOD)

HSP 1 Score: 1795 bits (4649), Expect = 0.000e+0
Identity = 965/1619 (59.60%), Postives = 1179/1619 (72.82%), Query Frame = 0
Query:    8 YSSAPERRLKAVQFGILGPEEIRRMSVAEIKHEKTYENGLPLVEGTADRRLGANGSQFPCQTCGDYDRTCTGHFGHIELAKPMYNIGFMNTTLKILRCVCHYCSRILCTERA--VEDLLKITRPTARMRAAMRATSGTKKVCTARDGCGHTQPKYSRDGFRIRAVFEDSADDSVDRKQTITAERTHAIFKRISDRDCSALGLSPQWSRPEWLILTLMPVPPLAVRPSISRGGL-RNEDDLTNKLGDIVKNNNALRVLESTGAVAHTIREQIDLVQYHVATYMNNEIPGVVTATV---RGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLKLHEVGVPKTIAQNLTYPEVVTTYNMAEMRKLVVNGPNEYPGAHSVEREDGRKVSLAYIPDRSGVRLEVGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFLERDFVMNLLMHVGDWDGIVPEPTIYKPRPLWTGKQIFSLILPPVNLIRFNKTHPDEENTDISPGDTKVYISRGELVCGIVDKNTVGTSANGLIHVTWKEFGPKVTDTMISQIQVLVNHYVLHRGQSIGIGDTIADEATMRNVIQTIQKAKDDVKDLVRKAQERELTLLPGKGMMESFETEVNKVLNGARDKSGSSAQDSLLKSNNIKRMVSAGSKGSFINISQICACVGQQNVEGKRIAYGFTRRTLPHFVLDDLGPESRGFVENSYLRGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEDIMVRYDGTVRNSCNHIIEFLYGEDGMDATFLEDQNLRTYKMSDKKLEQEFWLDPTDSSFGRDERGRPYLNDDTCDRIRQDAQMHIMLTEEFEQIKRDRGVLREEIVKNGDTKRPLAVNVDRVIWNAKLLHGIRPDSLSTLTPDQIRKGVRMLLKRTRVLV-LGDESALEDAAFQYSQEGGNPNVLEGDAGIVDPLAKEAQDNATLLFQIHIRAMLASKKLIVEHRLNDEAFLWILGEIESRFMTSRVAPGENIGAIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKNTKTPSLTVYLKHGLDRDN--SKRVQASLQHTSLEDVAQCSEIYFDPDPQTTVVEEDREMVSSYFELEDAPAGVSPWLLRIILDKDMLQDREISMDLVENSIHDTFGNDIHIIRSQDNDEKMVLRLRLQDETTQEKYGDMQMGGDAMEDEDQYD-DDDSVFLRRLEGNLLQQMNLGGIAGIRKVFMRKSRQTYVDKVSGTFKTKEEWVLDTDGVNLLAVMAHEDVDHTRTLSNDIVEIFEVLGIEAVREALLNEIRGVISFDGAYVNYRHLSILVDVMTYRGHLMAITRHGINRADTGPLMKCSFEETTDILLEAATHGIADHLNGVTENIMLGQMAPVGTGCFKLMLNEKMLQDAIEPKGPVAFAPSPTTNEGYEAGSWTPAR----VEATPGRRRGADIRATPGNAYSPA--AWSTPNRAGSVRG--GSPLMSQMSPAA---DDAQFSPVASPKGPGLGGGATPLQSPGRDYVTPVSPGGVGAASP 1605
            YSSA  R++K VQFGILGP+E++R SVAEIK E ++E G P  EG  D+RLGA G  FPC TC   ++ C GHFGHIEL KPMYNIGFM+ TL +LR VC +CSR+L    +  ++ + K+    +R++   +   G+KK C     CGH QP Y ++G +  A F  S D+++ +KQ I AER H +F+ ISD D   LGL PQ SRPEWL+ TL+PVPP  VRPSI      R EDDLT+ L DIVK NN LR  E  G     IR+Q++L+Q+ VA+Y+NNE+PG+  AT     GG R +KSI QR KGKEGRVRGNLMGKRVDFSARTVITPDPNL L EVGVP++IA NLTYPEVVT +N+  MR+LV NGP+ YPGA  +ER+DG K+SL YI +R  V LEVG+KVIRH+ DGD VLFNRQPSLHKMSIMGHR+RVMPYSTFRLNLSVTSPYNADFDGDEMN+HV ++HQTRAEV E+M VP CIVSPQGN PVMGIVQDTL+G MLFTQRD+FL RD VMNLL+HVG W+  +P P I KP PLWTGKQ+FSLI+PPVNL+RF+  H D+  ++IS GDTKV +  G+++ GI+DK TVG SA GLIHVTWK+ GP+ T  +IS IQ+LVNH++L RG SIGIGDTIADE T  +V +TIQKAKD+VK+L+ KAQ R+L  LPGK MMESFETEVNKVLNGARDKSGSSA+ SL K+NN+KRMVSAGSKGS+INISQICACVGQQNV GKRI+YGF RRTLPHFVLDDLGPESRGFVENSYLRGLT +EFFFHAMGGREGLIDTAVKTAETGYIQRRL+K+MEDI+V+YDGTVRNS   +I+FLYGEDGMD T +E+QNL  Y ++ K LE+ F L+  D +FG  E  +PYL  D  D  R D  + ++L EEF Q+  D+ +LREEI+K+ + K PL VN+DR++WNAK    I  DS+S L P QI +GVR L+++  V+    D+S+L++                 +  +++ L+ EAQ+NATLLF IH+R+ LA K ++ EHRL+ +AF W+LGEIE++F+    APGE+IGAIAAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRL E+INV+K TKTPSLTVYLK    +D   +K VQA LQHT+L +VA+  EIYFDP+P  TVV +D E+VSSYF+L+D    VSPWLLRI L ++ML DR+++M  V++ IH++F ND+H++ S+DN + +VLR+RL ++  +        G D ME+E++ D + + VFLR++ G  L  M+L GI  I+KVFMR+      DK SG F   +EWVLDTDGVNLLAVM+HE VDH RT+SNDI E+  VLGIE VR ALLNE+R VISFDGAYVNYRHL+ILVD MT RGHLM++TRHGINR  TG L +CSFEETTDILL AA +   D L GVT+NIMLGQ+AP+GTG F + LNE  L  A+        +P   T   +   S TP R      ATP      D   TP  AYSPA  A  +P   GS     GSP     SP          SP  + + P LG     +QSP      PVSPG    ASP
Sbjct:   10 YSSAEVRKVKRVQFGILGPDELKRRSVAEIKSEISFERGKPRREGPMDQRLGAIGRDFPCLTCYCNEKNCPGHFGHIELVKPMYNIGFMSVTLSVLRSVCFFCSRLLIPPDSDHLKTIRKLKNRASRLKLVAKLI-GSKKECHE---CGHKQPTYRKEGLKFVADFPKSEDENIQKKQEIYAERVHGVFRNISDTDADILGLHPQMSRPEWLLFTLLPVPPPHVRPSIMLDATKRGEDDLTHALADIVKCNNLLRTYEEQGMAQQDIRKQVELLQFKVASYLNNELPGLPRATQGGKTGGKRPLKSISQRLKGKEGRVRGNLMGKRVDFSARTVITPDPNLWLDEVGVPRSIAMNLTYPEVVTPFNIERMRELVFNGPDTYPGAKFIERDDGFKMSLGYIANRGDVPLEVGYKVIRHLCDGDVVLFNRQPSLHKMSIMGHRVRVMPYSTFRLNLSVTSPYNADFDGDEMNMHVAETHQTRAEVHEIMKVPRCIVSPQGNSPVMGIVQDTLVGGMLFTQRDSFLTRDVVMNLLLHVGGWNSEIPMPAILKPEPLWTGKQLFSLIMPPVNLVRFSDGHEDD-GSEISYGDTKVLVQNGKIISGIIDKRTVGKSAGGLIHVTWKQCGPQATADLISNIQILVNHWLLQRGFSIGIGDTIADEDTTAHVTKTIQKAKDEVKELISKAQNRDLVPLPGKTMMESFETEVNKVLNGARDKSGSSAEKSLSKTNNVKRMVSAGSKGSYINISQICACVGQQNVVGKRISYGFRRRTLPHFVLDDLGPESRGFVENSYLRGLTAAEFFFHAMGGREGLIDTAVKTAETGYIQRRLMKSMEDILVKYDGTVRNSTGTVIQFLYGEDGMDGTLVENQNLFLYGLNRKTLEKRFLLNNFDPNFGLAENAQPYLEQDIMDAARSDLHLQMLLREEFNQLVADQDILREEILKSDEMKWPLPVNIDRLLWNAKDQFKITQDSISDLHPKQIIEGVRDLIRKCVVIPHKEDDSSLDE-----------------EGKVLNRLSAEAQNNATLLFSIHLRSQLAVKVVLEEHRLSAQAFRWLLGEIENQFVHCICAPGESIGAIAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLNELINVAKTTKTPSLTVYLKSETAKDIELAKIVQAQLQHTTLRNVAKTVEIYFDPNPSQTVVPDDEELVSSYFDLQDEEVQVSPWLLRIELSREMLLDRKLAMKQVKDKIHESFQNDLHVMASEDNMDNLVLRIRLAEQPDKG-------GMDEMEEEEEDDVESEEVFLRKV-GESLAGMDLSGIPAIKKVFMREVEGRKADKSSGGFVKSKEWVLDTDGVNLLAVMSHEQVDHIRTISNDITEVLTVLGIEGVRAALLNEVRNVISFDGAYVNYRHLAILVDTMTCRGHLMSVTRHGINRISTGALQRCSFEETTDILLAAAVYAEEDKLQGVTQNIMLGQLAPLGTGDFGVHLNESALTSAVVDDSAKRLSP---TQYDFAFASSTPGREMFAAPATPATN--LDAVGTPHYAYSPANTAVFSPTVEGSFSPTPGSPTYGGASPGGYLVHTGAESPHRA-QSPSLG-----MQSP---RYQPVSPGRFAVASP 1584          
BLAST of Gcaud7641.t1 vs. uniprot
Match: O04142_NEOYE (DNA-directed RNA polymerase subunit (Fragment) n=2 Tax=Bangiaceae TaxID=31345 RepID=O04142_NEOYE)

HSP 1 Score: 1710 bits (4428), Expect = 0.000e+0
Identity = 922/1571 (58.69%), Postives = 1128/1571 (71.80%), Query Frame = 0
Query:   77 CTGHFGHIELAKPMYNIGFMNTTLKILRCVCHYCSRILCT---ERAVEDLLKITRPTARMRAAMRATSGTKKVCTARD-------------GCGHTQPKYSRDGFRIRAVFEDSADD-----SVDRKQTITAERTHAIFKRISDRDCSALGLSPQWSRPEWLILTLMPVPPLAVRPSISRGGL-RNEDDLTNKLGDIVKNNNALRVLESTGAVAHTIREQIDLVQYHVATYMNNEIPGVVTATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLKLHEVGVPKTIAQNLTYPEVVTTYNMAEMRKLVVNGPNEYPGAHSVEREDGRKVSLAYIPDRSGVRLEVGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFLERDFVMNLLMHVGDWDGIVPEPTIYKPRPLWTGKQIFSLILPPVNLIRFNKTHPDEENTDISPGDTKVYISRGELVCGIVDKNTVGTSANGLIHVTWKEFGPKVTDTMISQIQVLVNHYVLHRGQSIGIGDTIADEATMRNVIQTIQKAKDDVKDLVRKAQERELTLLPGKGMMESFETEVNKVLNGARDKSGSSAQDSLLKSNNIKRMVSAGSKGSFINISQICACVGQQNVEGKRIAYGFTRRTLPHFVLDDLGPESRGFVENSYLRGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEDIMVRYDGTVRNSCNHIIEFLYGEDGMDATFLEDQNLRTYKMSDKKLEQEFWLDPTDSSF-----------GRDER---GRPYLNDDTCDRIRQDAQMHIMLTEEFEQIKRDRGVLREEIVKNGDTKRPLAVNVDRVIWNAKLLHGIRPDSLSTLTPDQIRKGVRMLLKRTRVLVLGDESALEDAAFQYSQEGGNPNVLEGDAGIVDPLAKEAQDNATLLFQIHIRAMLASKKLIVEHRLNDEAFLWILGEIESRFMTSRVAPGENIGAIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKNTKTPSLTVYLKHGL--DRDNSKRVQASLQHTSLEDVAQCSEIYFDPDPQTTVVEEDREMVSSYFELEDAPAGVSPWLLRIILDKDMLQDREISMDLVENSIHDTFGNDIHIIRSQDNDEKMVLRLRLQDE---------TTQEKYGDMQMGGDAMEDEDQYDDDDSVFLRRLEGNLLQQMNLGGIAGIRKVFMRKSRQTYVDKVSGTFKTKEEWVLDTDGVNLLAVMAHEDVDHTRTLSNDIVEIFEVLGIEAVREALLNEIRGVISFDGAYVNYRHLSILVDVMTYRGHLMAITRHGINRADTGPLMKCSFEETTDILLEAATHGIADHLNGVTENIMLGQMAPVGTGCFKLMLNEKMLQDAIEPKGPVA----FAPSPTTNEGYEAGSWTPARV-EATPGRRRGADIRATPGNAYSPAAWSTP-----NRAGSVRGGSPLMSQMSPAADDAQFSPV---ASPKGPGLGGGATPLQSP 1587
            C GHFG IELAKPM++ GFM  TLK+LRCVC++CSR+L T   +  V+ +LK         A +R  SG   +CTAR              GCGH QPKY R+G +IRA F D   D     + +RKQ ++AE+  ++FKRISD D   +GLS +W+RPEWLILTL+PVPP  VR SI      R EDDLT+ L  IVKNN ALR LE  GA AH + EQI L+Q+HVATYMNN++PG+  A  + G R +KSI QR KGKEGR+RGNLMGKRVDFSARTVITPDPNL+L +VGVP +IA+NLT+PE VT YN+ EM++LV NGP+EYP A  ++R+DG +V+LAY+ +R+ V+LE+G+KV+RHI +GD+++FNRQPSLHKMSIMGHRI+VMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQ+H TRAEV ELM+VP CIVSPQGNKPVMGIVQDTLLGCMLFT RDTFL RD  M+LL+HV  WDG++P P I KP PLWTGKQ+FSL+LP VNL+R+  THPD+E+TDISPGDT+V I  GEL+ GIVDK TVG++ANGLIHVTWKE GP+ T  +IS IQVLVNHYV+ RGQSIGIGDTIAD  T  NV  TI  A+ +V  L R+AQE ELTLLPGK MMESFE EVNKVLNGARD SGSSAQ SLLKSNNIKRMVSAGSKGSFINISQICACVGQQNVEGKRI+YGF RRTLPHF +DDLGPESRGFVENSYL GL PSEFFFHAMGGREGLIDTAVKTAETGYIQRRL+KAMED+MV+YDGTVRNS + +I+FLYGEDG+D   +EDQ L T + ++    + + L   D              G  +R   GR         R R      +   EE  ++   RG       K G+ K PLAVN++R+IWNAK +  +R +  S L+P +I +GV +LL RTRVL   +++ ++  A +     G+ +  + +A  +  L++ AQ NATLLFQ+H+RA LASK ++ EHRL  +AF W+L EIE+RF  +    GE +GA AAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRL+EIINVSK TKTPSL VYL+     D + +K+VQA LQHT+L  V   +E+Y+DPD + T+V  D E+VS+Y+EL D     SPWLLR++L KDM+ DR+++M+ ++N IH  FG D+H++ S+DN  ++V+R+R+  E         +T+ ++ D Q       + +  +D + +FLR++E  LL  + L GI GI KVF R+  +  +D V+G+F  + EW+L+TDGVN +AVM HEDVD TRT+SNDIVE FEVLGIEAVR  LLNEIR VISFDGAYVNYRHLS+LVDVMT+RGHLMAI+RHGINR  +  LMKCSFEET+DILL+AA HG  D L GV+E+IMLGQ+AP+GTG F L LN+  L DA+EP+   A     A SP   E      +TP R  + TPGR    D   TP  AYSPA   TP     + A +  GG       SP    A FSP+   A   G    G  TP  SP
Sbjct:    2 CPGHFGFIELAKPMFHAGFMGMTLKLLRCVCYFCSRLLITKVDDPGVQKILKAVSKMESRAARLRIMSG---LCTARKCLITESPDGGASTGCGHEQPKYKREGLKIRADFPDDGADVDGAPANERKQNVSAEKVLSVFKRISDNDAELMGLSARWARPEWLILTLLPVPPPHVRTSIMMDATQRGEDDLTHNLAVIVKNNTALRNLEGHGAPAHRLAEQIFLLQFHVATYMNNDLPGMPRAAQKSG-RPLKSISQRLKGKEGRLRGNLMGKRVDFSARTVITPDPNLRLDQVGVPFSIAKNLTFPETVTAYNIEEMQQLVENGPDEYPDAKYIQRDDGYQVNLAYVRNRADVQLEIGYKVVRHITNGDFIVFNRQPSLHKMSIMGHRIKVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQTHATRAEVMELMMVPRCIVSPQGNKPVMGIVQDTLLGCMLFTYRDTFLRRDVTMSLLLHVEGWDGVIPPPAIIKPEPLWTGKQLFSLLLPDVNLVRYCNTHPDDESTDISPGDTRVLIVGGELITGIVDKRTVGSAANGLIHVTWKEKGPERTCVLISAIQVLVNHYVIMRGQSIGIGDTIADAHTDANVRATITGAQAEVTQLERRAQEGELTLLPGKSMMESFEVEVNKVLNGARDTSGSSAQLSLLKSNNIKRMVSAGSKGSFINISQICACVGQQNVEGKRISYGFRRRTLPHFRMDDLGPESRGFVENSYLIGLRPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLVKAMEDVMVKYDGTVRNSRSSVIQFLYGEDGLDGALVEDQKLDTLRSTNDSFTKRYHLTEPDLHLQGVVQFSVLVAGGSQRYPLGR---------RRRGAVSQGVGTAEEGPRLPTPRGF------KTGEAKLPLAVNIERLIWNAKRIFDVRQNDRSDLSPSKIVRGVELLLHRTRVLTSDEDAEVDAIAREMLPPDGSASGPQDEA--LKELSETAQLNATLLFQVHVRASLASKVVLSEHRLTRKAFTWLLIEIENRFQQALAPAGEMVGATAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLQEIINVSKRTKTPSLVVYLRGDAVHDAERAKQVQAELQHTTLRHVTHMTEVYYDPDLENTIVPADEELVSAYYELPDDVVHASPWLLRLVLAKDMVVDRKLAMNTIKNRIHAHFGGDLHVMASEDNAAELVIRVRVAMENEDKAGISDSTKPRFEDEQDADRVAAEMEDEEDAEDLFLRKVESQLLSNLTLSGIPGIDKVFTRQDNKIVIDSVTGSFTKENEWLLETDGVNFIAVMGHEDVDFTRTVSNDIVETFEVLGIEAVRATLLNEIRTVISFDGAYVNYRHLSVLVDVMTFRGHLMAISRHGINRVSSSALMKCSFEETSDILLDAAMHGETDTLTGVSESIMLGQLAPLGTGSFGLFLNDAALTDAVEPETDAAASARIARSPAMPESERG--YTPGREGQRTPGRA--FDAAMTPTYAYSPARARTPGGTAFSPAYTGPGG------FSPINATASFSPIMSSADAAGRATPGRMTPXXSP 1541          
BLAST of Gcaud7641.t1 vs. uniprot
Match: A0A7S1T799_9RHOD (DNA-directed RNA polymerase subunit (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T799_9RHOD)

HSP 1 Score: 1606 bits (4159), Expect = 0.000e+0
Identity = 827/1380 (59.93%), Postives = 1050/1380 (76.09%), Query Frame = 0
Query:    8 YSSAPERRLKAVQFGILGPEEIRRMSVAEIKHEKTYENGLPLVEGTADRRLGANGSQFPCQTCGDYDRTCTGHFGHIELAKPMYNIGFMNTTLKILRCVCHYCSRILCTERAVEDLLKITRPTARMRAAMRATSGTKKVCTARDGCGHTQPKYSRDGFRIRAVFEDSADDSVDRKQTITAERTHAIFKRISDRDCSALGLSPQWSRPEWLILTLMPVPPLAVRPSISRGGLRN-EDDLTNKLGDIVKNNNALRVLESTGAVAHTIREQIDLVQYHVATYMNNEIPGVVTATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLKLHEVGVPKTIAQNLTYPEVVTTYNMAEMRKLVVNGPNEYPGAHSVEREDGRKVSLAYIPDRSGVRLEVGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFLERDFVMNLLMHVGDWDGIVPEPTIYKPRPLWTGKQIFSLILPPVNLIRFNKTHPDEENTDISPGDTKVYISRGELVCGIVDKNTVGTSANGLIHVTWKEFGPKVTDTMISQIQVLVNHYVLHRGQSIGIGDTIADEATMRNVIQTIQKAKDDVKDLVRKAQERELTLLPGKGMMESFETEVNKVLNGARDKSGSSAQDSLLKSNNIKRMVSAGSKGSFINISQICACVGQQNVEGKRIAYGFTRRTLPHFVLDDLGPESRGFVENSYLRGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEDIMVRYDGTVRNSCNHIIEFLYGEDGMDATFLEDQNLRTYKMSDKKLEQEFWLDPTDSSFGRDERGRPYLNDDTCDRIRQDAQMHIMLTEEFEQIKRDRGVLREEIVKNGDTKRPLAVNVDRVIWNAKLLHGIRPDSLSTLTPDQIRKGVRMLLKRTRVLVLGDESALEDAAFQYSQEGGNPNVLEGDAGIVDPLAKEAQDNATLLFQIHIRAMLASKKLIVEHRLNDEAFLWILGEIESRFMTSRVAPGENIGAIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKNTKTPSLTVYLKHGLDRD--NSKRVQASLQHTSLEDVAQCSEIYFDPDPQTTVVEEDREMVSSYFELE-DAPAGVSPWLLRIILDKDMLQDREISMDLVENSIHDTFGNDIHIIRSQDNDEKMVLRLRL---QDETTQEKYGDMQMGGDAMEDEDQYDDDDSVFLRRLEGNLLQQMNLGGIAGIRKVFMRKSRQTYVDKVSGTFKTK----EEWVLDTDGVNLLAVMAHEDVDHTRTLSNDIVEIFEVLGIEAVR 1376
            YSSA  ++++ VQFGILGPEEIRRMSVAEIKH K +E GLP+ EG  D RLGA G    C+TC   ++ C GHFGHIELAKP++NIGF+N T+K+LRCVC YC+R+L  +   +D  ++ R       A R     K        CG++QPKY R+     A   +  +    RK++++AE+ + +F++I D +C  LG+S ++SRPEWLI+TL+PVPP  VRPSI    +R  EDDLT KLGDI+  N  LR LES G+ +H + EQ+ L+Q+HVATYMNNE+P +  A  +GG R IKSI QR KGKEGRVRGNLMGKRVDFSARTVITPDPNL   EVGVP++IA NLT+PEVVT YN   M ++V  GP+EYPGA  +E +DG+K S+ Y+ D+    LE+G+KVIRHI DGD VLFNRQPSLHKMSIMGHRIRVM +STFRLNLSVTSPYNADFDGDEMN+HV QSHQTRAE+ ELM VP CIVSPQ NKPVMGIVQDTLLGCM+FT RDTF+E+D VMNLL+HV ++DG +P+P I KPRPLWTGKQ+FSLILP VNL+R++  HPD+ENTDISPGDT+V I+ G L+CG VDK TVG+S  GLIHV WKE GP+ T  ++S IQVLVNH++L RG SIGIGD+IADE TM +VI +I KAK++VK LVRKAQE+EL LLPGK M ESFETEVN+VLNGARD+SGS AQ SLLKSNN+KRMVSAGSKGSFINISQI ACVGQQNVEGKRI+YGF +RTLPHFV++DLGPESRGFVENSYLRGLTP+EFFFHAMGGREGLIDTAVKT+ETGYIQRRL+KAMED+ V+YDGTVRNS   +IEFLYGEDGMD T  E Q +   KM+ K++++ F L+P D  FG    G+P+L     + +R D ++   L++EF+Q+  D+  LREE++++ +   PL +N++R+IWN K L  + PDS+S L P  +   +R LL +  +++   ES       + ++EG   ++ +  A  +  LA+ AQDNATLLFQ+HIR+ LASK ++ +HRL+++A+ +++GEI  RF+ +RV+PGE IGA+AAQSI EPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINV+ N KTPSLTVYL     RD   +K+VQ+ LQ+T+L++V  C+EIY+DPDP  TV+E D+++V+SY+EL+ D    VSPWLLRI L K+ML DR+I M+ ++N I++ FG+D++I+ S+DNDE +VLR+RL   +D  T E          +ME+E++  D+  V L+++E  L  ++ LGG+  IRKVFMR++ +  VD+ +G F  +    +EWVLDT+GVNLLAVMAH+DVD TRT+SN + E+F  LGIE VR
Sbjct:    9 YSSAEVKKVQRVQFGILGPEEIRRMSVAEIKHNKKFERGLPVDEGLMDPRLGAIGRDILCRTCECDEKNCPGHFGHIELAKPVFNIGFINITMKVLRCVCFYCARLLIDKGPEKDRTQVQRFLRIKNRAARMREVEKSKMNHCLQCGNSQPKYRREALTFTA---EKVEGDESRKESLSAEKVYQLFRQIPDEECEMLGMSWRYSRPEWLIITLLPVPPPHVRPSIMLDPVRRGEDDLTFKLGDIISANLQLRELESRGSASHLVDEQVKLLQFHVATYMNNELPNIPKAMQKGG-RPIKSITQRLKGKEGRVRGNLMGKRVDFSARTVITPDPNLMPDEVGVPRSIAMNLTFPEVVTPYNYDRMMEVVARGPDEYPGAKYIETDDGQKFSILYLRDKP---LEIGWKVIRHIVDGDVVLFNRQPSLHKMSIMGHRIRVMEHSTFRLNLSVTSPYNADFDGDEMNMHVAQSHQTRAEIFELMSVPRCIVSPQSNKPVMGIVQDTLLGCMVFTTRDTFIEKDLVMNLLLHVRNFDGELPKPAILKPRPLWTGKQLFSLILPEVNLVRYSNEHPDDENTDISPGDTRVLITGGRLICGTVDKRTVGSSPGGLIHVVWKEHGPERTSHLLSDIQVLVNHWILQRGFSIGIGDSIADEFTMSHVISSINKAKNEVKSLVRKAQEKELQLLPGKTMEESFETEVNRVLNGARDESGSFAQKSLLKSNNVKRMVSAGSKGSFINISQITACVGQQNVEGKRISYGFRKRTLPHFVVNDLGPESRGFVENSYLRGLTPTEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDVTVKYDGTVRNSAGQVIEFLYGEDGMDGTMFEKQKIFILKMTRKQMDKAFRLNPFDPKFGLASNGKPFLEPAIIEAVRNDPEIAKALSDEFDQLLEDQKCLREEVIRSKEDSWPLCINLERLIWNTKKLFHLTPDSVSDLNPKDVIASIRNLLAKDTIVI---EST------RVAEEG---DMEDKKANPITRLAQSAQDNATLLFQVHIRSSLASKVVLQQHRLSNKAWDYLIGEIRDRFLGARVSPGEMIGALAAQSISEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVTANPKTPSLTVYLVGDAARDAEKAKKVQSELQYTTLKNVTHCAEIYYDPDPLNTVIEADQDLVNSYYELDADEATDVSPWLLRIQLSKEMLTDRKIGMNHIKNVINEWFGSDLNIMASEDNDESLVLRIRLAKSKDLKTSEVLD------PSMEEEEE--DNGDVILKKVEQELFSKVLLGGVMNIRKVFMRQTNKVSVDEATGGFVDEPSRVKEWVLDTEGVNLLAVMAHKDVDFTRTISNHVTEMFTALGIEGVR 1361          
BLAST of Gcaud7641.t1 vs. uniprot
Match: A0A2R6WP03_MARPO (DNA-directed RNA polymerase subunit n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WP03_MARPO)

HSP 1 Score: 1588 bits (4112), Expect = 0.000e+0
Identity = 860/1615 (53.25%), Postives = 1108/1615 (68.61%), Query Frame = 0
Query:    8 YSSAPERRLKAVQFGILGPEEIRRMSVAEIKHEKTYENGLPLVEGTADRRLGANGSQFPCQTCGDYDRTCTGHFGHIELAKPMYNIGFMNTTLKILRCVCHYCSRILCTE--RAVEDLLKITRPTARMRAAMRATSGTKKVCTARD-----------------GCGHTQPKYSRDGFRIRAVFE------DSAD----DSVDRKQTITAERTHAIFKRISDRDCSALGLSPQWSRPEWLILTLMPVPPLAVRPSISR-GGLRNEDDLTNKLGDIVKNNNALRVLESTGAVAHTIREQIDLVQYHVATYMNNEIPGVVTATVRGGSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLKLHEVGVPKTIAQNLTYPEVVTTYNMAEMRKLVVNGPNEYPG---AHSVEREDGRKVSLAYIPDRSGVRLEVGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQGNKPVMGIVQDTLLGCMLFTQRDTFLERDFVMNLLMHVGDWDGIVPEPTIYKPRPLWTGKQIFSLILPP-VNLIRFNKTHPDEENTDISPGDTKVYISRGELVCGIVDKNTVGTSANGLIHVTWKEFGPKVTDTMISQIQVLVNHYVLHRGQSIGIGDTIADEATMRNVIQTIQKAKDDVKDLVRKAQERELTLLPGKGMMESFETEVNKVLNGARDKSGSSAQDSLLKSNNIKRMVSAGSKGSFINISQICACVGQQNVEGKRIAYGFTRRTLPHFVLDDLGPESRGFVENSYLRGLTPSEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEDIMVRYDGTVRNSCNHIIEFLYGEDGMDATFLEDQNLRTYKMSDKKLEQEFWLDPTDSSFGRDERGRPYLNDDTCDRIRQDAQMHIMLTEEFEQIKRDRGVLREEIVKNGDTKRPLAVNVDRVIWNAKLLHGIRPDSLSTLTPDQIRKGVRMLLKRTRVLVLGDESALEDAAFQYSQEGGNPNVLEGDAGIVDPLAKEAQDNATLLFQIHIRAMLASKKLIVEHRLNDEAFLWILGEIESRFMTSRVAPGENIGAIAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLKEIINVSKNTKTPSLTVYLKHGL--DRDNSKRVQASLQHTSLEDVAQCSEIYFDPDPQTTVVEEDREMVSSYFELED---APAGVSPWLLRIILDKDMLQDREISMDLVENSIHDTFGNDIHIIRSQDNDEKMVLRLRLQDETTQEKYGDMQMGGDAMEDEDQYDDDDSVFLRRLEGNLLQQMNLGGIAGIRKVFMRKSRQTYVDKVSGTFKTKEEWVLDTDGVNLLAVMAHEDVDHTRTLSNDIVEIFEVLGIEAVREALLNEIRGVISFDGAYVNYRHLSILVDVMTYRGHLMAITRHGINRADTGPLMKCSFEETTDILLEAATHGIADHLNGVTENIMLGQMAPVGTGCFKLMLNEKMLQDAIEPKGPVAFAPSPTTNEGYEAGSWTPARVEATPGRRRGADIRATPGNA--YSPAAWSTPNRAGSVRGGSPLMSQMSPAADDAQFSP-----VASPKGPG 1576
            YS A   R+K VQFGILGP+EIR+MSV +I+  +TY+ G P + G +D RLG       C+TC      C GHFGH+ELAKPM++IGF+ T L +LRCVC+ CSR+L  E     +   K+  P  R++  +     +K  C   D                 GCG  QPK S DG +I A F+      D  D    + V+RKQ ++AE+  +I KRISD + + LGL+P+++RPEWLIL ++P+PP  VRPS+      R+EDDLT++L  I+++NN L+  E  GA  H I E   L+Q+H+ATY +N++PG   AT R G R IKSI QR K KEGR+RGNLMGKRVDFSARTVITPDPN+ + E+GVP +IA NLTYPE VT YNM  +++LV  GP+  PG   A  + REDG+++ L ++   S   LE+G+KV RH+ DGD+VLFNRQPSLHKMSIMGHRIR+MPYSTFRLNLSVTSPYNADFDGDEMN+HVPQS +TRAEV ELM+VP CIVSPQ NKPV+GIVQDTLLGC   T+RD F+E+D  MN+LM   D+DG +P PTI KPRP+WTGKQ+F+LI+P  +NL+R +  HPD E  D+SPGDT V I +GELVCGI+ K ++GTS   LIHV W+E GP      +   Q LVN+++L +G SIGIGDTIAD ATM  +  TI KAK DVK+L+++AQE++L   PG+ MMESFE  VN+VLN ARD++GSSAQ SL +SNN+K MV+AGSKGSFINISQ+ ACVGQQNVEGKRI YGF  RTLPHF  DD GPESRGFVENSYLRGLTP EFFFHAMGGREGLIDTAVKT+ETGYIQRRL+KAMED+MV+YDGTVRNS   +I+FLYGEDGMD+ ++E Q L + KM  K+    +  +       RD+    Y+  +  + I+   +   +   E ++++ DR  +  EI  +GD    L VN+ R+IWNA+ +  +     S + P +I + V  L +R +V V GD                            DP++ EAQ NATL F   +R+ LASK+++ E RL  EAF W++GEIE+RF+ S VAPGE IG +AAQSIGEPATQMTLNTFH+AGVSAKNVTLGVPRL+EIIN++K TKTPSL+VYLK G+  ++D +K VQ +L++T+L  V Q +EI++DPDP +T++EED E V SY+E+ D   AP  +SPWLLRI L+++M+ D++++M  +   I+  F +D+  I + DN EK++LR+R+             M  +A + E     +D VFL+++E N+L +M L GI  IRKVF+R+++     ++ G FK ++EW+LDT+GVN+LAVM HE+VD TRT SN ++E+ EVLGIEAVR ALL E+R VI FDG+YVNYRHL+IL D+MTYRGHLMAITRHGINR DTGP+M+CSFEET DILL+AA +  ADHL GVTENIMLGQ+AP+GTG F L LNE+MLQ AIE +        P+  EG      TPAR         G+ +  TP +    SP+   +P+             + SP +D AQFSP     V SP  PG
Sbjct:    7 YSPADLARVKTVQFGILGPDEIRQMSVVKIESSETYDRGKPRMGGLSDPRLGTIDRHVKCETCSGSMAECPGHFGHLELAKPMFHIGFLKTVLALLRCVCYNCSRVLADEDDHRFKQAKKVRNPKHRLKKVLECCK-SKTKCEGGDEIEDDTKEEIEKKKKHGGCGAQQPKISIDGMKIIAEFKQPRKRADEQDQYMPEPVERKQQLSAEKILSILKRISDEEITLLGLNPKFARPEWLILQVLPIPPPPVRPSVMMDSSARSEDDLTHQLVMIIRHNNNLKRQEQNGAPTHIINEFAQLLQFHIATYFDNDLPGQPRATQRSG-RPIKSICQRLKAKEGRIRGNLMGKRVDFSARTVITPDPNINIDELGVPWSIALNLTYPETVTPYNMERLKELVEYGPHPPPGKTGAKYIIREDGQRLDLRFLKKSSDRHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNKPVIGIVQDTLLGCRKVTKRDAFIEKDVFMNILMWWEDFDGKIPIPTILKPRPVWTGKQVFNLIIPKQINLMRQSFGHPDGETGDMSPGDTVVRIEKGELVCGILCKKSLGTSGGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQGFSIGIGDTIADSATMEKINDTIAKAKSDVKELIKQAQEKQLEAQPGRTMMESFENNVNRVLNNARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMIACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDVMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQKLDSLKMKKKEFNNTYKFE-----IDRDDWNPDYMQPEAAEDIKTIQEFRNVFDAEVQKLEADRRQMGTEIAPSGDPNCYLPVNLKRLIWNAQKIFKVDTKKPSDMHPMEIVEAVDKLQERLKV-VAGD----------------------------DPISMEAQKNATLFFNCLLRSTLASKRVLKEWRLPKEAFEWVIGEIETRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHFAGVSAKNVTLGVPRLREIINLAKKTKTPSLSVYLKAGVNGEKDKAKNVQCALEYTTLRSVTQATEIWYDPDPMSTIIEEDVEFVRSYYEMPDEDVAPEKISPWLLRIELNREMMVDKKLTMADIAEKINLEFDDDLTCIFNDDNAEKLILRVRI-------------MNDEAPKGEVPEQSEDDVFLKKIESNMLTEMALRGIPDIRKVFIREAKTQKFHEIDG-FKPEKEWMLDTEGVNMLAVMCHEEVDATRTNSNHLIEVIEVLGIEAVRNALLKELRSVIEFDGSYVNYRHLAILCDIMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADHLRGVTENIMLGQLAPIGTGDFGLHLNEQMLQHAIELQ-------LPSFMEGPGDFGVTPAR---------GSPMIGTPHHEGMMSPSYLLSPSM------------RSSPISDSAQFSPYVGGMVFSPSSPG 1543          
The following BLAST results are available for this feature:
BLAST of Gcaud7641.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXL8_9FLOR0.000e+089.53DNA-directed RNA polymerase subunit n=1 Tax=Gracil... [more]
R7QLG5_CHOCR0.000e+071.03DNA-directed RNA polymerase subunit n=1 Tax=Chondr... [more]
O09451_9FLOR0.000e+073.00DNA-directed RNA polymerase subunit (Fragment) n=1... [more]
Q9AXN1_9FLOR0.000e+069.35DNA-directed RNA polymerase subunit (Fragment) n=1... [more]
Q9AXN0_9RHOD0.000e+062.04DNA-directed RNA polymerase subunit n=1 Tax=Glauco... [more]
A0A5J4YJT1_PORPP0.000e+062.13DNA-directed RNA polymerase subunit n=1 Tax=Porphy... [more]
A0A7S3EQ85_9RHOD0.000e+059.60DNA-directed RNA polymerase subunit n=6 Tax=Rhodos... [more]
O04142_NEOYE0.000e+058.69DNA-directed RNA polymerase subunit (Fragment) n=2... [more]
A0A7S1T799_9RHOD0.000e+059.93DNA-directed RNA polymerase subunit (Fragment) n=1... [more]
A0A2R6WP03_MARPO0.000e+053.25DNA-directed RNA polymerase subunit n=2 Tax=Marcha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 663..690
NoneNo IPR availableGENE3D2.40.40.20coord: 316..496
e-value: 2.3E-77
score: 261.0
NoneNo IPR availableGENE3D6.10.250.2940coord: 774..832
e-value: 1.3E-31
score: 109.9
NoneNo IPR availableGENE3D6.20.50.80coord: 833..876
e-value: 5.9E-13
score: 50.1
NoneNo IPR availableGENE3D1.10.150.390coord: 1428..1471
e-value: 7.1E-21
score: 75.9
NoneNo IPR availableGENE3D3.30.1490.180RNA polymerase iicoord: 358..417
e-value: 2.3E-77
score: 261.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1533..1562
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1734..1835
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1497..1585
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1686..1710
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1687..1705
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1800..1821
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1759..1778
NoneNo IPR availablePANTHERPTHR19376:SF56DNA-DIRECTED RNA POLYMERASE SUBUNITcoord: 8..1490
NoneNo IPR availableCDDcd02584RNAP_II_Rpb1_Ccoord: 1057..1477
e-value: 0.0
score: 717.062
NoneNo IPR availableCDDcd02733RNAP_II_RPB1_Ncoord: 17..840
e-value: 0.0
score: 1415.37
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 8..1480
IPR006592RNA polymerase, N-terminalSMARTSM00663rpolaneu7coord: 215..518
e-value: 1.4E-189
score: 645.8
IPR000722RNA polymerase, alpha subunitPFAMPF00623RNA_pol_Rpb1_2coord: 325..490
e-value: 1.7E-74
score: 249.5
IPR007075RNA polymerase Rpb1, domain 6PFAMPF04992RNA_pol_Rpb1_6coord: 860..1078
e-value: 5.3E-49
score: 166.6
IPR007081RNA polymerase Rpb1, domain 5PFAMPF04998RNA_pol_Rpb1_5coord: 794..1426
e-value: 2.2E-104
score: 349.2
IPR007073RNA polymerase Rpb1, domain 7PFAMPF04990RNA_pol_Rpb1_7coord: 1161..1303
e-value: 4.2E-37
score: 127.2
IPR038120RNA polymerase Rpb1, funnel domain superfamilyGENE3D1.10.132.30coord: 655..773
e-value: 4.7E-39
score: 135.2
IPR038593RNA polymerase Rpb1, domain 7 superfamilyGENE3D3.30.1360.140coord: 1161..1305
e-value: 1.6E-37
score: 130.4
IPR007066RNA polymerase Rpb1, domain 3PFAMPF04983RNA_pol_Rpb1_3coord: 494..656
e-value: 6.4E-49
score: 165.9
IPR007080RNA polymerase Rpb1, domain 1PFAMPF04997RNA_pol_Rpb1_1coord: 14..323
e-value: 9.4E-94
score: 314.2
IPR007083RNA polymerase Rpb1, domain 4PFAMPF05000RNA_pol_Rpb1_4coord: 685..787
e-value: 2.8E-34
score: 117.3
IPR042102RNA polymerase Rpb1, domain 3 superfamilyGENE3D1.10.274.100RNA polymerase Rpb1, domain 3coord: 497..650
e-value: 1.0E-54
score: 186.3
IPR044893RNA polymerase Rpb1, clamp domain superfamilyGENE3D4.10.860.120RNA polymerase II, clamp domaincoord: 4..128
e-value: 7.0E-30
score: 105.4
IPR045867DNA-directed RNA polymerase, subunit beta-primePANTHERPTHR19376DNA-DIRECTED RNA POLYMERASEcoord: 8..1490

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_240_length_34680_cov_4.545549contigNODE_240_length_34680_cov_4.545549:15052..20559 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7641.t1Gcaud7641.t1Gracilaria caudata M_176_S67 malemRNANODE_240_length_34680_cov_4.545549 15052..20559 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7641.t1 ID=Gcaud7641.t1|Name=Gcaud7641.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1836bp
MYVPAQQYSSAPERRLKAVQFGILGPEEIRRMSVAEIKHEKTYENGLPLV
EGTADRRLGANGSQFPCQTCGDYDRTCTGHFGHIELAKPMYNIGFMNTTL
KILRCVCHYCSRILCTERAVEDLLKITRPTARMRAAMRATSGTKKVCTAR
DGCGHTQPKYSRDGFRIRAVFEDSADDSVDRKQTITAERTHAIFKRISDR
DCSALGLSPQWSRPEWLILTLMPVPPLAVRPSISRGGLRNEDDLTNKLGD
IVKNNNALRVLESTGAVAHTIREQIDLVQYHVATYMNNEIPGVVTATVRG
GSRAIKSIGQRFKGKEGRVRGNLMGKRVDFSARTVITPDPNLKLHEVGVP
KTIAQNLTYPEVVTTYNMAEMRKLVVNGPNEYPGAHSVEREDGRKVSLAY
IPDRSGVRLEVGFKVIRHIKDGDYVLFNRQPSLHKMSIMGHRIRVMPYST
FRLNLSVTSPYNADFDGDEMNLHVPQSHQTRAEVQELMLVPHCIVSPQGN
KPVMGIVQDTLLGCMLFTQRDTFLERDFVMNLLMHVGDWDGIVPEPTIYK
PRPLWTGKQIFSLILPPVNLIRFNKTHPDEENTDISPGDTKVYISRGELV
CGIVDKNTVGTSANGLIHVTWKEFGPKVTDTMISQIQVLVNHYVLHRGQS
IGIGDTIADEATMRNVIQTIQKAKDDVKDLVRKAQERELTLLPGKGMMES
FETEVNKVLNGARDKSGSSAQDSLLKSNNIKRMVSAGSKGSFINISQICA
CVGQQNVEGKRIAYGFTRRTLPHFVLDDLGPESRGFVENSYLRGLTPSEF
FFHAMGGREGLIDTAVKTAETGYIQRRLIKAMEDIMVRYDGTVRNSCNHI
IEFLYGEDGMDATFLEDQNLRTYKMSDKKLEQEFWLDPTDSSFGRDERGR
PYLNDDTCDRIRQDAQMHIMLTEEFEQIKRDRGVLREEIVKNGDTKRPLA
VNVDRVIWNAKLLHGIRPDSLSTLTPDQIRKGVRMLLKRTRVLVLGDESA
LEDAAFQYSQEGGNPNVLEGDAGIVDPLAKEAQDNATLLFQIHIRAMLAS
KKLIVEHRLNDEAFLWILGEIESRFMTSRVAPGENIGAIAAQSIGEPATQ
MTLNTFHYAGVSAKNVTLGVPRLKEIINVSKNTKTPSLTVYLKHGLDRDN
SKRVQASLQHTSLEDVAQCSEIYFDPDPQTTVVEEDREMVSSYFELEDAP
AGVSPWLLRIILDKDMLQDREISMDLVENSIHDTFGNDIHIIRSQDNDEK
MVLRLRLQDETTQEKYGDMQMGGDAMEDEDQYDDDDSVFLRRLEGNLLQQ
MNLGGIAGIRKVFMRKSRQTYVDKVSGTFKTKEEWVLDTDGVNLLAVMAH
EDVDHTRTLSNDIVEIFEVLGIEAVREALLNEIRGVISFDGAYVNYRHLS
ILVDVMTYRGHLMAITRHGINRADTGPLMKCSFEETTDILLEAATHGIAD
HLNGVTENIMLGQMAPVGTGCFKLMLNEKMLQDAIEPKGPVAFAPSPTTN
EGYEAGSWTPARVEATPGRRRGADIRATPGNAYSPAAWSTPNRAGSVRGG
SPLMSQMSPAADDAQFSPVASPKGPGLGGGATPLQSPGRDYVTPVSPGGV
GAASPYATSPAYATSPAYAASPAYAQSPAYSAASPAYVASPAAASPGRAA
SPYGAGNHSSFVPSSPGYSLKSPAAGLSGVPQSPGLVAKYSPTSPGFSPT
SPAYSPSAARAAGGGGTGGAAYSPTSPGYNSTAASPAAGYGGGGGLNYSP
GTPKAYSPGSPAFSPSSPAAQGYSPSTPGFMPQGAARHSRGAGAYQPGDA
ASPSSPQYSPSSPQYSPRAPSPRGHSPQDEAPEEQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006592RNA_pol_N
IPR000722RNA_pol_asu
IPR007075RNA_pol_Rpb1_6
IPR007081RNA_pol_Rpb1_5
IPR007073RNA_pol_Rpb1_7
IPR038120Rpb1_funnel_sf
IPR038593RNA_pol_Rpb1_7_sf
IPR007066RNA_pol_Rpb1_3
IPR007080RNA_pol_Rpb1_1
IPR007083RNA_pol_Rpb1_4
IPR042102RNA_pol_Rpb1_3_sf
IPR044893RNA_pol_Rpb1_clamp_domain
IPR045867DNA-dir_RpoC_beta_prime