Gcaud7642.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7642.t1
Unique NameGcaud7642.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length317
Homology
BLAST of Gcaud7642.t1 vs. uniprot
Match: A0A2V3IXH8_9FLOR (Cyclin-U4-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXH8_9FLOR)

HSP 1 Score: 382 bits (980), Expect = 4.020e-130
Identity = 208/314 (66.24%), Postives = 251/314 (79.94%), Query Frame = 0
Query:    1 MTAQTVQSPSAVEATAAVSPLHFTLITSRSALISLLSATIQAHVTVNDEPPEPPFDEMTVFHALEAPSITVSDYVSRVSKYAFCSEACLVAAYHYMMRAIEKDPKLVLTSLSFHRLFITAIVLACKFFDDLSYNLVYYSKVGGLPHQELANLEMQMLHILDFRLNIPAATFVEIEANLVSGLKVIEANATKAVVANLVAEAREALMDPEMHTIPYELLPGEQPELGTSTGACLPSPCMMPVSPSNCVETSLSRNSSLASVPDETMFAQSSHPKRLSFSQRTFGRQRSSKTHSRFSHSPVSPDSAYRRRARASLG 314
            MTAQT +S +    T+     +FTL+ SR AL+++LSATIQAHV  ND+ PEP  D+MTVFHALEAP+I+V +YV+R+SKYAFCS+ACLVAAYHYM RAI  DPKL LTSLS HR+FITA+VLACK+ DDLSYNLVYYSKVGGLP++ELANLEMQMLHILDFRL+I    FVE+E+NLVSGLKV+EANA+KAVV NLV  A+  LM  +   + YE  PGE+    T       SP   P S + CV+T+LSRNSSLASVPDE ++AQ++HP+RLS+S + F RQRSSKT+SRFSHSP+SP+SAYRRRARASLG
Sbjct:    1 MTAQTTESNAPCVPTSVRPSKNFTLLASRQALVAILSATIQAHVAANDQLPEPALDQMTVFHALEAPAISVCEYVTRLSKYAFCSDACLVAAYHYMTRAIASDPKLALTSLSIHRMFITALVLACKYMDDLSYNLVYYSKVGGLPYKELANLEMQMLHILDFRLDISPNQFVELESNLVSGLKVLEANASKAVVLNLVDHAKSLLMQSDSRGVAYEPFPGEKLVDDTE------SPVSSPSSSTTCVDTALSRNSSLASVPDEALYAQAAHPRRLSYSHKNFARQRSSKTYSRFSHSPISPESAYRRRARASLG 308          
BLAST of Gcaud7642.t1 vs. uniprot
Match: R7QMA3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMA3_CHOCR)

HSP 1 Score: 210 bits (534), Expect = 1.240e-62
Identity = 114/195 (58.46%), Postives = 146/195 (74.87%), Query Frame = 0
Query:   23 FTLITSRSALISLLSATIQAHVTVNDEPPEPPFDEMTVFHALEAPSITVSDYVSRVSKYAFCSEACLVAAYHYMMRAIEKDPKLVLTSLSFHRLFITAIVLACKFFDDLSYNLVYYSKVGGLPHQELANLEMQMLHILDFRLNIPAATFVEIEANLVSGLKVIEANATKAVVANLVAEAREALMDPEMHTIPYEL 217
            F+LITS  AL++++ A IQA V+VND  P  PF++MTVFHA E P+I+V+DYV+RVSKYAFCS ACLVAA +Y+  AI KDPKL L+SLS HRLFITA++LA K+FDD+SYNL YY+KVGGLP +ELANLE+ +L +L+FRL+IPA  F  IE NLV  L V EA+     +  +V  AR  L   ++  +P EL
Sbjct:   16 FSLITSPPALVAVIIANIQAQVSVNDAKPPAPFEDMTVFHAQEPPAISVADYVARVSKYAFCSHACLVAASYYIDEAIRKDPKLALSSLSVHRLFITAVILASKYFDDVSYNLPYYAKVGGLPFKELANLEINLLSVLNFRLDIPAQKFAAIETNLVDQLDVFEAHPIDEELTRVVDVARYELWHADI--VPVEL 208          
BLAST of Gcaud7642.t1 vs. uniprot
Match: D8R719_SELML (Uncharacterized protein (Fragment) n=4 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R719_SELML)

HSP 1 Score: 117 bits (292), Expect = 1.550e-28
Identity = 55/114 (48.25%), Postives = 79/114 (69.30%), Query Frame = 0
Query:   58 MTVFHALEAPSITVSDYVSRVSKYAFCSEACLVAAYHYMMRAIEKDPKLVLTSLSFHRLFITAIVLACKFFDDLSYNLVYYSKVGGLPHQELANLEMQMLHILDFRLNIPAATF 171
            +TVFH L APSI++  Y+ R+ KYA CS +C V AY Y+ R I++ P L +TSL+ HRL +T++++A KF DD  YN  YY+KVGG+  QE+  LE++ L  L+FRL +  + F
Sbjct:   32 LTVFHGLRAPSISIDKYLERIFKYANCSPSCFVVAYVYIDRFIQQKPSLPITSLNVHRLLVTSVMVAAKFLDDAYYNNAYYAKVGGVNTQEMNRLELEFLFHLNFRLQVTVSVF 145          
BLAST of Gcaud7642.t1 vs. uniprot
Match: A0A4Y7J5V7_PAPSO (Cyclin n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7J5V7_PAPSO)

HSP 1 Score: 112 bits (281), Expect = 1.490e-26
Identity = 56/116 (48.28%), Postives = 79/116 (68.10%), Query Frame = 0
Query:   56 DEMTVFHALEAPSITVSDYVSRVSKYAFCSEACLVAAYHYMMRAIEKDPKLVLTSLSFHRLFITAIVLACKFFDDLSYNLVYYSKVGGLPHQELANLEMQMLHILDFRLNIPAATF 171
            D +T+FHA+ APS+++  Y++R+ KYA CS +C V AY Y+ R +E     V TSL+ HRLFIT++++A KF DDL YN  YY+KVGG+   E+  +E+  L  LDFRL +   TF
Sbjct:   61 DTITIFHAVRAPSLSIQQYINRIFKYASCSPSCFVIAYIYIDRFLECADVHV-TSLNVHRLFITSVMIAAKFIDDLFYNNAYYAKVGGVSTAEMNKMEISFLFSLDFRLQVTERTF 175          
BLAST of Gcaud7642.t1 vs. uniprot
Match: A0A660KRZ5_9ROSI (Cyclin n=1 Tax=Carpinus fangiana TaxID=176857 RepID=A0A660KRZ5_9ROSI)

HSP 1 Score: 112 bits (280), Expect = 3.150e-26
Identity = 59/140 (42.14%), Postives = 85/140 (60.71%), Query Frame = 0
Query:   32 LISLLSATIQAHVTVNDEPPEPPFDEMTVFHALEAPSITVSDYVSRVSKYAFCSEACLVAAYHYMMRAIEKDPKLVLTSLSFHRLFITAIVLACKFFDDLSYNLVYYSKVGGLPHQELANLEMQMLHILDFRLNIPAATF 171
            LI+ LS+ +Q  V  ND        +++VFH L  P+I++  Y+ R+ KYA CS +C V AY Y+ R  ++   L + S S HRL IT++++A KF DD+ YN  YY+KVGG+   E+  LE+  L  L FRLN+   TF
Sbjct:   13 LIAFLSSLLQRAVESNDLNRRLQPQQISVFHGLTRPTISIQSYLERIFKYANCSPSCFVVAYVYLDRFAQRQAALPINSFSVHRLLITSVMVAAKFMDDMYYNNAYYAKVGGISTTEMKFLEVDFLFGLGFRLNVTPTTF 152          
BLAST of Gcaud7642.t1 vs. uniprot
Match: UPI001CC685AD (cyclin-P3-1 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC685AD)

HSP 1 Score: 112 bits (279), Expect = 6.730e-26
Identity = 61/142 (42.96%), Postives = 89/142 (62.68%), Query Frame = 0
Query:   30 SALISLLSATIQAHVTVNDEPPEPPFDEMTVFHALEAPSITVSDYVSRVSKYAFCSEACLVAAYHYMMRAIEKDPKLVLTSLSFHRLFITAIVLACKFFDDLSYNLVYYSKVGGLPHQELANLEMQMLHILDFRLNIPAATF 171
            S L S+L  T+Q +  + D   +   D +T+FH L  PS+ + +Y+ R+ KY+ CS +C V AY Y+ R I++   + LTSL+ HRL IT+++ A KFFDD  +N  YY+KVGG+   E+  LEM+ L  LDFRL +   TF
Sbjct:   36 SLLSSILERTVQKNEKLLDTTKKK--DTVTIFHGLREPSLGIRNYIDRIFKYSSCSPSCFVVAYIYIDRFIQRMD-VHLTSLNVHRLIITSVMAAAKFFDDAFFNNAYYAKVGGVSTSEMNRLEMKFLFSLDFRLQVTVMTF 174          
BLAST of Gcaud7642.t1 vs. uniprot
Match: A0A0H5R953_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R953_9EUKA)

HSP 1 Score: 110 bits (274), Expect = 3.330e-25
Identity = 51/118 (43.22%), Postives = 81/118 (68.64%), Query Frame = 0
Query:   56 DEMTVFHALEAPSITVSDYVSRVSKYAFCSEACLVAAYHYMMRAIEKDPKLVLTSLSFHRLFITAIVLACKFFDDLSYNLVYYSKVGGLPHQELANLEMQMLHILDFRLNIPAATFVE 173
            D +T FHAL+ P+IT+ DY+ R+ KYA CS+ C V A  Y+ R I+ +    + SL+ HRL IT+++LA KFFDD  +N  YY+KVGG+P  E+ +LE++ L +++F L + +  +++
Sbjct:   35 DSVTKFHALKPPAITILDYLERIRKYASCSDECFVLALVYIDRIIQSNHNFTVNSLNVHRLLITSVMLAAKFFDDQYFNNAYYAKVGGVPCHEINSLEVEFLFMINFSLFVTSDAYMQ 152          
BLAST of Gcaud7642.t1 vs. uniprot
Match: A0A0V0QPK1_PSEPJ (Cyclin-like protein n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0QPK1_PSEPJ)

HSP 1 Score: 109 bits (272), Expect = 3.490e-25
Identity = 59/151 (39.07%), Postives = 88/151 (58.28%), Query Frame = 0
Query:   21 LHFTLITSRSALISLLSATIQAHVTVNDEPPEPPFDEMTVFHALEAPSITVSDYVSRVSKYAFCSEACLVAAYHYMMRAIEKDPKLVLTSLSFHRLFITAIVLACKFFDDLSYNLVYYSKVGGLPHQELANLEMQMLHILDFRLNIPAATF 171
            L+ + I S   LIS++S  +   +   D+      + +T FH    P ITV DY+ R+ K + CS+ C + A  Y+ R  E++   ++ S + HRL IT+I+LA KFFDD  YN  YYSK+GG+ +QE+  LE + LH ++FRL I    F
Sbjct:   27 LNHSKIMSNEELISIVSGLLTEIIQETDQIQN---NFLTQFHGKSVPQITVKDYLIRIQKASHCSQECFILALIYIDRITERNKNFLINSFNIHRLLITSIMLAAKFFDDRYYNNEYYSKIGGISNQEINQLEREFLHYINFRLYISPVLF 174          
BLAST of Gcaud7642.t1 vs. uniprot
Match: UPI001CF98EA5 (cyclin-U3-1-like isoform X1 n=4 Tax=Anacardiaceae TaxID=4011 RepID=UPI001CF98EA5)

HSP 1 Score: 110 bits (274), Expect = 4.990e-25
Identity = 55/116 (47.41%), Postives = 78/116 (67.24%), Query Frame = 0
Query:   56 DEMTVFHALEAPSITVSDYVSRVSKYAFCSEACLVAAYHYMMRAIEKDPKLVLTSLSFHRLFITAIVLACKFFDDLSYNLVYYSKVGGLPHQELANLEMQMLHILDFRLNIPAATF 171
            D +TVFH L APSIT+  Y+ R+ KYA CS +C V A  Y+ + +++  ++ LTSL+ HRL IT++++A KF DD  YN  YY++VGG+   EL  +EM+ L  LDFRL +   TF
Sbjct:   77 DNITVFHGLRAPSITIQQYIDRIFKYASCSPSCFVVAQIYVDKFLQQT-EVRLTSLNVHRLLITSVMVAAKFIDDAFYNNAYYARVGGVSTAELNRMEMKFLFSLDFRLQVNVKTF 191          
BLAST of Gcaud7642.t1 vs. uniprot
Match: M1V7G0_CYAM1 (Similar to PREG1-like negative regulator n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V7G0_CYAM1)

HSP 1 Score: 113 bits (282), Expect = 7.020e-25
Identity = 58/124 (46.77%), Postives = 80/124 (64.52%), Query Frame = 0
Query:   57 EMTVFHALEAPSITVSDYVSRVSKYAFCSEACLVAAYHYMMRAIEKDPKLVLTSLSFHRLFITAIVLACKFFDDLSYNLVYYSKVGGLPHQELANLEMQMLHILDFRLNIPAATFVEIEANLVS 180
            E + FHA   PSI+V  Y  R+  +AFCS+AC V A  Y+ R   ++  L LTS + HRL ITA++LA KFFDD+ YN  YY+KVGGLP  E+  LE++ML  L ++LN+    F   E+ L++
Sbjct:  187 EASPFHASRIPSISVEAYFERIYTFAFCSKACYVIALLYLDRLSARNANLALTSFTAHRLLITAVMLAAKFFDDIFYNNAYYAKVGGLPLSEMNALEVRMLRELSYQLNVSVEEFYNFESMLIN 310          
The following BLAST results are available for this feature:
BLAST of Gcaud7642.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXH8_9FLOR4.020e-13066.24Cyclin-U4-1 n=1 Tax=Gracilariopsis chorda TaxID=44... [more]
R7QMA3_CHOCR1.240e-6258.46Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
D8R719_SELML1.550e-2848.25Uncharacterized protein (Fragment) n=4 Tax=Selagin... [more]
A0A4Y7J5V7_PAPSO1.490e-2648.28Cyclin n=2 Tax=Papaver somniferum TaxID=3469 RepID... [more]
A0A660KRZ5_9ROSI3.150e-2642.14Cyclin n=1 Tax=Carpinus fangiana TaxID=176857 RepI... [more]
UPI001CC685AD6.730e-2642.96cyclin-P3-1 n=1 Tax=Telopea speciosissima TaxID=54... [more]
A0A0H5R953_9EUKA3.330e-2543.22Uncharacterized protein n=1 Tax=Spongospora subter... [more]
A0A0V0QPK1_PSEPJ3.490e-2539.07Cyclin-like protein n=1 Tax=Pseudocohnilembus pers... [more]
UPI001CF98EA54.990e-2547.41cyclin-U3-1-like isoform X1 n=4 Tax=Anacardiaceae ... [more]
M1V7G0_CYAM17.020e-2546.77Similar to PREG1-like negative regulator n=1 Tax=C... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013922Cyclin PHO80-likePFAMPF08613Cyclincoord: 58..164
e-value: 4.8E-27
score: 95.3
IPR013922Cyclin PHO80-likePANTHERPTHR15615UNCHARACTERIZEDcoord: 27..289
NoneNo IPR availableGENE3D1.10.472.10coord: 20..210
e-value: 2.2E-42
score: 147.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..316
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 72..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_240_length_34680_cov_4.545549contigNODE_240_length_34680_cov_4.545549:21186..22136 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7642.t1Gcaud7642.t1Gracilaria caudata M_176_S67 malemRNANODE_240_length_34680_cov_4.545549 21186..22136 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7642.t1 ID=Gcaud7642.t1|Name=Gcaud7642.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=317bp
MTAQTVQSPSAVEATAAVSPLHFTLITSRSALISLLSATIQAHVTVNDEP
PEPPFDEMTVFHALEAPSITVSDYVSRVSKYAFCSEACLVAAYHYMMRAI
EKDPKLVLTSLSFHRLFITAIVLACKFFDDLSYNLVYYSKVGGLPHQELA
NLEMQMLHILDFRLNIPAATFVEIEANLVSGLKVIEANATKAVVANLVAE
AREALMDPEMHTIPYELLPGEQPELGTSTGACLPSPCMMPVSPSNCVETS
LSRNSSLASVPDETMFAQSSHPKRLSFSQRTFGRQRSSKTHSRFSHSPVS
PDSAYRRRARASLGVK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013922Cyclin_PHO80-like
IPR036915Cyclin-like_sf