Gcaud7638.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud7638.t1
Unique NameGcaud7638.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length546
Homology
BLAST of Gcaud7638.t1 vs. uniprot
Match: A0A2V3IXN0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXN0_9FLOR)

HSP 1 Score: 588 bits (1517), Expect = 2.270e-204
Identity = 293/544 (53.86%), Postives = 395/544 (72.61%), Query Frame = 0
Query:    1 MSPTSTKFDARPSQYFEKAVVWLLGLSFGEHDDGAERTAVSLKIGEIINIWVSGLLAADFPADEVENTFSSFSKLIQTEDIPELINWSVISISDVDRLIHVHWVRAARNMIELPLPPAKPLELAIDSLNVALKLLDCIAAKDNRRSAAANTAPGHLVFSTLRLFISAEHQNDQRSSNVRDLCDKSLSHLCRMRRSENKSQLLSSLLNHVIPLIRDAAQVDLSSFKAPYTAHDAAPTSHVLHSLLCEADENKLNEAAGEVLPILRELVESVPESIRVQSLHSISLLSSRLPTSVMEPQRTSKSLQAALSWGDVPTSMIALPLLATFLPKTKPMDSRGEEYFASISKVIETIVRHMQARDQRPDSNAQDLSRLESAKAVVVLSTFVPSLLQDLMLCRIDWILSLSAFLRQLGSFVKCGALTAADVTQTLAVLQESIKWAWLRVDSFRKEVFEGCLSLLMETKTIPGSFRIQAAIRDVVLQLGKCGQEERLIELAQEVRSCAKHYESLAVATELCKEVENIVAIEGKTDSHSSIMAGSLVERFFPEL 544
            MSP++ +  A PS++ E+A+V LLGLSFGEHDDG +R  +S K+ ++IN WVSGLLAADF +DEVE TF +FSKL+ +E +PELI WS + ISD+D LIH+HWVRA+RN+IELPLPPAKP+ELAIDSL+  LKLLD  AAKDNRRSAAANTAP HL+F+T RL +S E   ++ +  +  +C++SL HL RMRR E K+ LLSSL   VIPLIR A +VDL++ K  Y  H  APTSHVLH L+C+A +  LN+ AGEVL ILR+L E+V E IRVQ+L+S+S LSSR+P   M+P +T +SL +A+ W D PT M A+PLLA  LP+T+  DS+   Y A++SK++ETIVR MQ R+    SNA+    L +AKA V L+  VP LL++LM+  + W+ +LS F +++ +  + G +  +D+   L VL +S+KWAWLRVDSFR +VFE CLS+ METK +  SF I+  I+ +VLQLGKCG+ ++++E+ QEVR  +  Y+SL    E CKE+EN ++ E + D  ++I  G+L  RFF EL
Sbjct:    1 MSPSTIRTTALPSKFIERAIVLLLGLSFGEHDDGTQRRVISQKLADVINKWVSGLLAADFASDEVEATFLAFSKLLHSEGVPELIMWSEVPISDIDSLIHLHWVRASRNLIELPLPPAKPIELAIDSLSTGLKLLDFAAAKDNRRSAAANTAPAHLIFATTRLLLSRERLPNRETERIGFVCEESLEHLLRMRRFERKADLLSSLFQSVIPLIRLAVEVDLNTLKPAYNIHCIAPTSHVLHRLMCDATDQNLNDNAGEVLAILRDLAEAVQEHIRVQALYSMSFLSSRIPLFSMQPSKTCESLLSAIVWNDAPTLMTAIPLLAALLPRTRISDSQARRYSAAVSKIVETIVRLMQTRENGT-SNAEHALVLTNAKAAVELAGLVPPLLKELMMRHMGWLTALSDFAKRIANMARHGDIQVSDIVHVLTVLSDSVKWAWLRVDSFRSDVFEACLSVFMETKDVEDSFLIRTEIKRIVLQLGKCGRVDQILEIVQEVRQSSNGYDSLRSVAEFCKEIENDISFENENDDQATIAGGALFSRFFSEL 543          
The following BLAST results are available for this feature:
BLAST of Gcaud7638.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IXN0_9FLOR2.270e-20453.86Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 31..484

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_240_length_34680_cov_4.545549contigNODE_240_length_34680_cov_4.545549:6433..8070 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud7638.t1Gcaud7638.t1Gracilaria caudata M_176_S67 malemRNANODE_240_length_34680_cov_4.545549 6433..8070 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud7638.t1 ID=Gcaud7638.t1|Name=Gcaud7638.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=546bp
MSPTSTKFDARPSQYFEKAVVWLLGLSFGEHDDGAERTAVSLKIGEIINI
WVSGLLAADFPADEVENTFSSFSKLIQTEDIPELINWSVISISDVDRLIH
VHWVRAARNMIELPLPPAKPLELAIDSLNVALKLLDCIAAKDNRRSAAAN
TAPGHLVFSTLRLFISAEHQNDQRSSNVRDLCDKSLSHLCRMRRSENKSQ
LLSSLLNHVIPLIRDAAQVDLSSFKAPYTAHDAAPTSHVLHSLLCEADEN
KLNEAAGEVLPILRELVESVPESIRVQSLHSISLLSSRLPTSVMEPQRTS
KSLQAALSWGDVPTSMIALPLLATFLPKTKPMDSRGEEYFASISKVIETI
VRHMQARDQRPDSNAQDLSRLESAKAVVVLSTFVPSLLQDLMLCRIDWIL
SLSAFLRQLGSFVKCGALTAADVTQTLAVLQESIKWAWLRVDSFRKEVFE
GCLSLLMETKTIPGSFRIQAAIRDVVLQLGKCGQEERLIELAQEVRSCAK
HYESLAVATELCKEVENIVAIEGKTDSHSSIMAGSLVERFFPELR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold