Gcaud1823.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1823.t1
Unique NameGcaud1823.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length220
Homology
BLAST of Gcaud1823.t1 vs. uniprot
Match: A0A2V3IJW9_9FLOR (5-demethoxyubiquinone hydroxylase, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJW9_9FLOR)

HSP 1 Score: 333 bits (853), Expect = 8.800e-114
Identity = 175/219 (79.91%), Postives = 191/219 (87.21%), Query Frame = 0
Query:    1 MFLAVSRRARKVQSLSSLRLYCSSAALDEDKSQRSRAQFRSPFLTDPRKKKIIDRMLRVDHAGEIGARQIYAGQLAVFRNTPVGKVIREMAEQEQKHLDAFDKLIKNRRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYNDQVRALMTWEDEGELRNLFREFRDDELEHKDTGIQYDAEKAPFYRALSDVIQAGCRAAITITERV 219
            M + V RRARKV + S+LR  C++ A  E+ S  SR+  +SPFL DP KKK+ID MLRVDHAGEIGARQIYAGQLAVFRNTPVG VI EMAEQE+KHL+AFD LIK RRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYN+QVRAL+  + E +LR LFREFRDDELEHKDTGI+YDAEKAPFYRALSDVIQAGCRAAI ITERV
Sbjct:    4 MLVGVPRRARKVATRSTLRCLCTTTAPHEN-SDESRSGPQSPFLADPNKKKLIDTMLRVDHAGEIGARQIYAGQLAVFRNTPVGNVIHEMAEQEKKHLNAFDALIKERRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYNEQVRALLKDDTERQLRALFREFRDDELEHKDTGIEYDAEKAPFYRALSDVIQAGCRAAIAITERV 221          
BLAST of Gcaud1823.t1 vs. uniprot
Match: A0A7S0BT74_9RHOD (5-demethoxyubiquinone hydroxylase, mitochondrial n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BT74_9RHOD)

HSP 1 Score: 252 bits (643), Expect = 7.480e-82
Identity = 125/181 (69.06%), Postives = 149/181 (82.32%), Query Frame = 0
Query:   41 SPFLTDPRKKKIIDRMLRVDHAGEIGARQIYAGQLAVFRNTPVGKVIREMAEQEQKHLDAFDKLIKNRRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYNDQVRALMT--WEDEGELRNLFREFRDDELEHKDTGIQYDAEKAPFYRALSDVIQAGCRAAITITERV 219
            SP   D   K ++D+M+RVDHAGE+GARQIYAGQLA+FR T +  VI EMAEQE+KHL+AF++LI  RRVRPTAMLP+W VAGYALG G+AL+GKEAAMACTVAVEEVIAEHYNDQ+R L    +E E  LR + +EFRDDELEHKD GI++DAE AP Y+A+S VI+AGC AAI I+ERV
Sbjct:   40 SPLFADKESKAVLDKMIRVDHAGELGARQIYAGQLAIFRGTSLQPVIEEMAEQEKKHLNAFNRLISERRVRPTAMLPVWRVAGYALGFGSALVGKEAAMACTVAVEEVIAEHYNDQIRQLHETGFEKEQPLREMIKEFRDDELEHKDIGIEFDAEMAPMYKAISQVIKAGCHAAIYISERV 220          
BLAST of Gcaud1823.t1 vs. uniprot
Match: A0A7S1TNN0_9RHOD (5-demethoxyubiquinone hydroxylase, mitochondrial n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TNN0_9RHOD)

HSP 1 Score: 234 bits (596), Expect = 1.190e-73
Identity = 114/178 (64.04%), Postives = 148/178 (83.15%), Query Frame = 0
Query:   44 LTDPRKKKIIDRMLRVDHAGEIGARQIYAGQLAVFRNTPVGKVIREMAEQEQKHLDAFDKLIKNRRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYNDQVRALMT--WEDEGELRNLFREFRDDELEHKDTGIQYDAEKAPFYRALSDVIQAGCRAAITITERV 219
            +++  ++ I+ RMLRV+HAGE+GARQIYAGQLAV R T  G VI EMA QE+KHLD F+KL+  RRVRPTA+LP+WN+AG+ALG+GTALLG +AAMACTVAVE+VI+ HYN+QVR L+   +E E  LR+ FR+FRD+ELEH  TG++++AE+AP Y ALS+VI+ GC+AAI I+ERV
Sbjct:  120 MSESERRAIVHRMLRVNHAGELGARQIYAGQLAVLRGTATGPVIEEMALQEKKHLDEFEKLLCERRVRPTALLPLWNIAGFALGMGTALLGTKAAMACTVAVEDVISRHYNEQVRELLAPEFESEKSLRDTFRQFRDEELEHMHTGVEHEAEQAPMYHALSEVIKTGCKAAIYISERV 297          
BLAST of Gcaud1823.t1 vs. uniprot
Match: A0A5J4YUZ8_PORPP (5-demethoxyubiquinone hydroxylase, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUZ8_PORPP)

HSP 1 Score: 229 bits (583), Expect = 2.370e-72
Identity = 111/178 (62.36%), Postives = 144/178 (80.90%), Query Frame = 0
Query:   44 LTDPRKKKIIDRMLRVDHAGEIGARQIYAGQLAVFRNTPVGKVIREMAEQEQKHLDAFDKLIKNRRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYNDQVRALMT--WEDEGELRNLFREFRDDELEHKDTGIQYDAEKAPFYRALSDVIQAGCRAAITITERV 219
            L    ++K+I+RMLRV+HAGE+GARQIYAGQLAV  N+ VG +IREMA+ E +HL  F+KL+  RRVRPT MLP+WN+AG+ALG G+AL+GKEAAMACTVAVE+VI++HYNDQVR L+   WE E  LR   R+FRDDE++H D GI++DA+KAP Y  +S++I+ GC AAI ++ERV
Sbjct:   71 LAKEEQRKVIERMLRVNHAGELGARQIYAGQLAVLGNSSVGGMIREMAQHELEHLQEFEKLVVERRVRPTVMLPLWNIAGFALGFGSALMGKEAAMACTVAVEDVISKHYNDQVRELLQPGWEHEQPLREKLRKFRDDEMDHHDIGIEHDAQKAPAYDFISNIIKQGCHAAIFVSERV 248          
BLAST of Gcaud1823.t1 vs. uniprot
Match: A0A0B6ZDP2_9EUPU (5-demethoxyubiquinone hydroxylase, mitochondrial n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6ZDP2_9EUPU)

HSP 1 Score: 221 bits (562), Expect = 6.980e-70
Identity = 109/181 (60.22%), Postives = 141/181 (77.90%), Query Frame = 0
Query:   41 SPFLTDPRKKKIIDRMLRVDHAGEIGARQIYAGQLAVFRNTPVGKVIREMAEQEQKHLDAFDKLIKNRRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYNDQVRALMTWEDEG--ELRNLFREFRDDELEHKDTGIQYDAEKAPFYRALSDVIQAGCRAAITITERV 219
            S  L D R + ++DR++RVDHAGE GA +IYAGQLAV RN+ VG +I+EM E+E+ H + F+KL+   RVRPT +LP WN+AG+ALG GTALLGKEAAMACTVAVE+VI +HYN Q+R L+  + E   EL  + ++FRDDEL H DTG++YDAEKAPFY AL+ VI+ GCR AI ++ER+
Sbjct:   17 STTLKDSRTQALLDRVIRVDHAGEFGADRIYAGQLAVLRNSSVGPLIKEMWEEEKYHRETFEKLMVENRVRPTVLLPFWNIAGFALGAGTALLGKEAAMACTVAVEDVIGDHYNSQLRQLVEDDPEKHKELLEIVKKFRDDELHHHDTGLKYDAEKAPFYSALTQVIKVGCRGAIWLSERI 197          
BLAST of Gcaud1823.t1 vs. uniprot
Match: K1QQZ7_CRAGI (5-demethoxyubiquinone hydroxylase, mitochondrial n=2 Tax=Crassostrea TaxID=6564 RepID=K1QQZ7_CRAGI)

HSP 1 Score: 220 bits (561), Expect = 9.270e-70
Identity = 109/176 (61.93%), Postives = 138/176 (78.41%), Query Frame = 0
Query:   46 DPRKKKIIDRMLRVDHAGEIGARQIYAGQLAVFRNTPVGKVIREMAEQEQKHLDAFDKLIKNRRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYNDQVRALMTWEDEG--ELRNLFREFRDDELEHKDTGIQYDAEKAPFYRALSDVIQAGCRAAITITERV 219
            D + +K++ R++RVD AGE+GA +IYAGQ+AV  NTPVG +I+EM EQEQ+HL+ F+KLI  +RVRPTA+LP+WN+AG+ALG GTALLGKE AMACTVAVE VI EHYN Q+R LM  + E   EL     +FRDDEL H DTG+++DAEKAP Y ALS VI+ GC  AI ++ER+
Sbjct:   20 DEKTRKLLSRIIRVDQAGELGADRIYAGQIAVLGNTPVGPIIQEMKEQEQEHLETFNKLIVEKRVRPTALLPLWNIAGFALGAGTALLGKEGAMACTVAVESVIGEHYNSQIRDLMEDDPEKHKELIKKLSKFRDDELHHHDTGLEHDAEKAPMYDALSQVIKVGCIGAIWLSERI 195          
BLAST of Gcaud1823.t1 vs. uniprot
Match: A0A7M7NQH7_STRPU (5-demethoxyubiquinone hydroxylase, mitochondrial n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7NQH7_STRPU)

HSP 1 Score: 221 bits (562), Expect = 1.140e-69
Identity = 118/218 (54.13%), Postives = 160/218 (73.39%), Query Frame = 0
Query:   12 VQSLSSLRLYC--------SSAALDEDKSQRSRAQFRSPFLTDPRKKKIIDRMLRVDHAGEIGARQIYAGQLAVFRNTPVGKVIREMAEQEQKHLDAFDKLIKNRRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYNDQVRALMTWEDE--GELRNLFREFRDDELEHKDTGIQYDAEKAPFYRALSDVIQAGCRAAITITERV 219
            +Q+L+S+R YC         S A+ E K QRS +      L+   ++++IDR +RVDHAGE+GA +IYAGQLAV +NT VG +I+EM +QE+ H + F++LI  RRVRPT +LPIWNVAGY LG GTAL+GKEAAMACTVAVEE I +HYNDQ+RAL+  + E   EL  + ++FRD+ELEH +TG++ DA+KAP Y  +  VI+ GC+AAI ++ER+
Sbjct:    1 MQNLTSIR-YCVLRQYKLRMSRAIVEVKGQRSASS-----LSGLTRREMIDRFIRVDHAGEVGADRIYAGQLAVLKNTSVGPLIQEMWDQEKHHKETFERLIPERRVRPTVLLPIWNVAGYVLGAGTALMGKEAAMACTVAVEESIGQHYNDQIRALIEDDPEVHKELLEIIKQFRDEELEHLNTGLENDAKKAPMYSTMDMVIKGGCKAAIWLSERI 212          
BLAST of Gcaud1823.t1 vs. uniprot
Match: UPI00035978DA (5-demethoxyubiquinone hydroxylase, mitochondrial n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035978DA)

HSP 1 Score: 219 bits (559), Expect = 2.200e-69
Identity = 108/184 (58.70%), Postives = 143/184 (77.72%), Query Frame = 0
Query:   38 QFRSPFLTDPRKKKIIDRMLRVDHAGEIGARQIYAGQLAVFRNTPVGKVIREMAEQEQKHLDAFDKLIKNRRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYNDQVRALMTWEDEG--ELRNLFREFRDDELEHKDTGIQYDAEKAPFYRALSDVIQAGCRAAITITERV 219
            +F S  + D R + +ID+++RVDHAGE+GA +IYAGQ AV   TPVG +I+EM E+E+ H   FD+L+  RRVRPTA+LP+WNVAG+ LG  TA+LGKEAAMACTVAVE+VI +HYN Q+R LM  + E   EL  + ++FRDDEL H DTG+++DAEKAPFY AL++VI+ GCR AI I+E++
Sbjct:   17 RFASTAVKDARTRALIDKIIRVDHAGELGADRIYAGQHAVLGKTPVGPLIKEMWEEEKYHKATFDRLMAERRVRPTALLPLWNVAGFVLGASTAMLGKEAAMACTVAVEDVIGDHYNSQIRELMEDDPEKHKELLEIVKKFRDDELHHHDTGLEHDAEKAPFYSALTEVIKVGCRGAIWISEKI 200          
BLAST of Gcaud1823.t1 vs. uniprot
Match: UPI001E1DE160 (5-demethoxyubiquinone hydroxylase, mitochondrial-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DE160)

HSP 1 Score: 219 bits (558), Expect = 3.790e-69
Identity = 104/188 (55.32%), Postives = 144/188 (76.60%), Query Frame = 0
Query:   34 RSRAQFRSPFLTDPRKKKIIDRMLRVDHAGEIGARQIYAGQLAVFRNTPVGKVIREMAEQEQKHLDAFDKLIKNRRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYNDQVRALMTWEDEG--ELRNLFREFRDDELEHKDTGIQYDAEKAPFYRALSDVIQAGCRAAITITERV 219
            R+ +++ S    D + K ++D+++R+DHAGE GA++IY GQLAV  +TP G +I+EM E+E+KHL  F+KL+++ R RPT +LP+WN+AG+ALG G+ALLGKE AMACTVAVE VI +HYNDQ+R LM  + E   EL    +EFRDDEL H DTG+++DAEKAPFY  LS+ I+ GC+ AI I+E++
Sbjct:   19 RTLSRYISDRAKDEQTKALLDKIIRIDHAGEFGAKRIYQGQLAVLADTPTGPLIQEMQEEEEKHLAEFEKLMRDHRARPTVLLPLWNIAGFALGAGSALLGKEGAMACTVAVESVIGQHYNDQIRELMEDDPEKHRELLKTLKEFRDDELHHHDTGLEHDAEKAPFYNVLSEAIKIGCKGAIWISEKI 206          
BLAST of Gcaud1823.t1 vs. uniprot
Match: UPI00142590C4 (5-demethoxyubiquinone hydroxylase, mitochondrial-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142590C4)

HSP 1 Score: 216 bits (551), Expect = 4.230e-68
Identity = 108/173 (62.43%), Postives = 136/173 (78.61%), Query Frame = 0
Query:   51 KIIDRMLRVDHAGEIGARQIYAGQLAVFRNTPVGKVIREMAEQEQKHLDAFDKLIKNRRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIAEHYNDQVRALMTWEDEG----ELRNLFREFRDDELEHKDTGIQYDAEKAPFYRALSDVIQAGCRAAITITERV 219
            ++IDR++RVDHAGE+GA +IYAGQ+AV   T VG VI+EM +QE++HL  F+KLI   RVRPTA+LP WNVAG+ALG G+ALLGKE AMACTVAVE VI EHYNDQ+R L+  ED+     EL  + ++FRDDE+ H DTG+  DAEKAPFY  L++VI+ GCRAA+ + ERV
Sbjct:   35 QLIDRIIRVDHAGELGADRIYAGQMAVLGKTDVGPVIQEMWDQEKEHLATFEKLIPENRVRPTALLPFWNVAGFALGAGSALLGKEGAMACTVAVESVIGEHYNDQIRQLL--EDDPKKHEELLEILKKFRDDEMHHHDTGLANDAEKAPFYSGLTEVIKVGCRAAVWVAERV 205          
The following BLAST results are available for this feature:
BLAST of Gcaud1823.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJW9_9FLOR8.800e-11479.915-demethoxyubiquinone hydroxylase, mitochondrial n... [more]
A0A7S0BT74_9RHOD7.480e-8269.065-demethoxyubiquinone hydroxylase, mitochondrial n... [more]
A0A7S1TNN0_9RHOD1.190e-7364.045-demethoxyubiquinone hydroxylase, mitochondrial n... [more]
A0A5J4YUZ8_PORPP2.370e-7262.365-demethoxyubiquinone hydroxylase, mitochondrial n... [more]
A0A0B6ZDP2_9EUPU6.980e-7060.225-demethoxyubiquinone hydroxylase, mitochondrial n... [more]
K1QQZ7_CRAGI9.270e-7061.935-demethoxyubiquinone hydroxylase, mitochondrial n... [more]
A0A7M7NQH7_STRPU1.140e-6954.135-demethoxyubiquinone hydroxylase, mitochondrial n... [more]
UPI00035978DA2.200e-6958.705-demethoxyubiquinone hydroxylase, mitochondrial n... [more]
UPI001E1DE1603.790e-6955.325-demethoxyubiquinone hydroxylase, mitochondrial-l... [more]
UPI00142590C44.230e-6862.435-demethoxyubiquinone hydroxylase, mitochondrial-l... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012347Ferritin-likeGENE3D1.20.1260.10coord: 45..193
e-value: 9.0E-10
score: 40.2
IPR011566Ubiquinone biosynthesis protein Coq7PFAMPF03232COQ7coord: 53..219
e-value: 3.3E-70
score: 235.3
IPR011566Ubiquinone biosynthesis protein Coq7PANTHERPTHR11237COENZYME Q10 BIOSYNTHESIS PROTEIN 7coord: 11..219
IPR011566Ubiquinone biosynthesis protein Coq7HAMAPMF_01658COQ7coord: 5..219
score: 31.020538
IPR011566Ubiquinone biosynthesis protein Coq7CDDcd01042DMQHcoord: 53..218
e-value: 1.03969E-82
score: 241.662
IPR009078Ferritin-like superfamilySUPERFAMILY47240Ferritin-likecoord: 55..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_23_length_76035_cov_4.613123contigNODE_23_length_76035_cov_4.613123:37883..38542 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1823.t1Gcaud1823.t1Gracilaria caudata M_176_S67 malemRNANODE_23_length_76035_cov_4.613123 37883..38542 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1823.t1 ID=Gcaud1823.t1|Name=Gcaud1823.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=220bp
MFLAVSRRARKVQSLSSLRLYCSSAALDEDKSQRSRAQFRSPFLTDPRKK
KIIDRMLRVDHAGEIGARQIYAGQLAVFRNTPVGKVIREMAEQEQKHLDA
FDKLIKNRRVRPTAMLPIWNVAGYALGLGTALLGKEAAMACTVAVEEVIA
EHYNDQVRALMTWEDEGELRNLFREFRDDELEHKDTGIQYDAEKAPFYRA
LSDVIQAGCRAAITITERV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012347Ferritin-like
IPR011566Ubq_synth_Coq7
IPR009078Ferritin-like_SF