Gcaud1831.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1831.t1
Unique NameGcaud1831.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length783
Homology
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BLAST of Gcaud1831.t1 vs. uniprot
Match: A0A2V3IV39_9FLOR (Ankyrin repeat domain-containing protein 50 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV39_9FLOR)

HSP 1 Score: 284 bits (727), Expect = 2.750e-78
Identity = 172/487 (35.32%), Postives = 278/487 (57.08%), Query Frame = 0 
Query:  296 ANELERIWVHAQHSPLSHDQLVSCIQSANISSLTCFVIAHNLLLLAVRKRVTDKKRIQTFGGVRDCLLKRVYLPATKLKLTAPEKYLVLQAVASAEKFGFIYSGNEALVKFVIDLRTEIEASALEVQKATITLARNIYYLRDTCRGSGEWIWESQKEEEFKELGCNQEHMYADMQDLNISLNKLHSCLNEKNESSILEAVIVFCLTIVPVVGRVAKSAAFADPKTALRYSIQQTYSALAAGVSFLPRVDFSSIWTAAALTSNEFAMKLDSVSRKRLECVVRHSKFKTLAKLHSQITSAIDELQFIKPD-EKEDEGKASMRQRFCILASRANMDTISAQVAIEELKCFLDRSFPQDSQRSKHVTTKIVELIDEHSRVSMDAFLLALDELKDMYSGPQ-QKAKFELVHRFRKAANPDTRLLIVIAKAVLLRLFQECVGDKNSVGKEFFSGRTGAWWNDSFVYNTLGEYATNESSIDEDGFVKASMKIMF 780
            +N LE++W+    S    ++L++ ++S  I+S + F++AHNLLLLAVR+R+  K+ ++  GG RD +L  VYLP TK+ LT  +K LV + ++ AEK GFI       VK V +LR+EI  S +++Q A +T+AR I  +        +W    Q  EEF++    Q+ M  DMQ ++ SLN+LHS L +   + ++  ++  CL+I+PVVG     A  A        + +Q  +    G+     VD SS  +   LTS EF  KLD V +KR++ VV+HSKF+T+A+L +++   +++L+    D    D+ +  +RQRF +LA+ +N +T+SAQ A++EL+  L+R     ++    V   ++  +    R++ DAFL+A  ++K  Y  PQ +K   EL   F+ AA   ++LL  IAK VL  LF E   +  S+G      R+   W++S V   L E+  N + I+E+GF++  MK++F
Sbjct:  721 SNALEQLWITYASSVPPKNELLAALRSDQITSFSSFIMAHNLLLLAVRQRIIRKEEVRLLGGSRDYILHEVYLPVTKVDLTQEQKCLVAKVLSYAEKLGFIRDAT--FVKVVAELRSEIRESNIQLQTALVTVARKINSIDQRVDTLEKWT--KQAAEEFRKACEGQQQMVKDMQRMSTSLNELHSLLRKHQRNRMIAGILSSCLSIIPVVGGAIAGATLATCDLGFGITYEQASALGITGLLAFLSVDLSSFQSIGTLTSKEFLSKLDPVVQKRVDTVVKHSKFRTVARLQNEVNVMMNDLEMGDMDLSATDDEEVELRQRFNVLAATSNAETVSAQEAVKELQHILERRLKLQAEAGD-VANAVIGHMGNRGRLNFDAFLMAFCDMKKKYPAPQTRKIPVELSENFQSAAG-GSQLLKSIAKPVLRALFHESCSEGGSIGSGVSFRRSREEWDESEVDRLLTEHGVNGAMIEEEGFIEVGMKVLF 1201
The following BLAST results are available for this feature:
BLAST of Gcaud1831.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IV39_9FLOR2.750e-7835.32Ankyrin repeat domain-containing protein 50 n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 71..100
e-value: 0.34
score: 20.0
coord: 237..266
e-value: 74.0
score: 12.2
coord: 104..133
e-value: 3.1E-6
score: 36.7
coord: 171..200
e-value: 0.0052
score: 26.0
coord: 137..166
e-value: 7.1E-5
score: 32.2
coord: 204..233
e-value: 0.019
score: 24.1
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 203..266
e-value: 6.9E-7
score: 29.8
coord: 119..196
e-value: 6.4E-16
score: 58.7
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 237..269
score: 11.11353
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 204..236
score: 10.95327
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 71..103
score: 10.36565
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 171..203
score: 11.43405
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 104..136
score: 11.94154
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 137..169
score: 10.63275
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 210..298
e-value: 6.9E-17
score: 63.5
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 139..209
e-value: 5.3E-23
score: 83.0
coord: 39..138
e-value: 5.0E-22
score: 79.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 69..288
NoneNo IPR availablePANTHERPTHR24198:SF165ANKYRIN REPEAT FAMILY PROTEINcoord: 68..160
NoneNo IPR availablePANTHERPTHR24198ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEINcoord: 63..279
NoneNo IPR availablePANTHERPTHR24198:SF165ANKYRIN REPEAT FAMILY PROTEINcoord: 63..279
NoneNo IPR availablePANTHERPTHR24198ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEINcoord: 68..160
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 325..342
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..324
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 343..782
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 237..269
score: 9.754822
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 71..103
score: 9.011944
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 104..136
score: 10.577295
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 204..236
score: 9.595634
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 171..203
score: 10.073198
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 137..161
score: 9.436445

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_23_length_76035_cov_4.613123contigNODE_23_length_76035_cov_4.613123:56863..59211 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1831.t1Gcaud1831.t1Gracilaria caudata M_176_S67 malemRNANODE_23_length_76035_cov_4.613123 56863..59211 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1831.t1 ID=Gcaud1831.t1|Name=Gcaud1831.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=783bp
MSWRKRRASALHKDQEDTISKDDNSLHFFTSDSEIQIDQDLRTATLRKKR
ARKVSPRPSKAASAITREIEERSTSLSLAARHGNVQLVKFLLRQNCEVDH
ADKNGWTALHWAARYGYAEVVEQLIQAQCEVNIESKNEWTALHIAARYGH
YDVVRQLLKANCLVDVAHKKHGWTALHFASHYGFSDVVKLLLDASCAVDT
ANNAGRTALHLAILAGYEIVAEQLLSSSARVDICDREGDTPLHKAVPKTQ
KLIILSLIKAGANMKLENKAGRTPISLAGRVDVVALLRSLYIRYQANELE
RIWVHAQHSPLSHDQLVSCIQSANISSLTCFVIAHNLLLLAVRKRVTDKK
RIQTFGGVRDCLLKRVYLPATKLKLTAPEKYLVLQAVASAEKFGFIYSGN
EALVKFVIDLRTEIEASALEVQKATITLARNIYYLRDTCRGSGEWIWESQ
KEEEFKELGCNQEHMYADMQDLNISLNKLHSCLNEKNESSILEAVIVFCL
TIVPVVGRVAKSAAFADPKTALRYSIQQTYSALAAGVSFLPRVDFSSIWT
AAALTSNEFAMKLDSVSRKRLECVVRHSKFKTLAKLHSQITSAIDELQFI
KPDEKEDEGKASMRQRFCILASRANMDTISAQVAIEELKCFLDRSFPQDS
QRSKHVTTKIVELIDEHSRVSMDAFLLALDELKDMYSGPQQKAKFELVHR
FRKAANPDTRLLIVIAKAVLLRLFQECVGDKNSVGKEFFSGRTGAWWNDS
FVYNTLGEYATNESSIDEDGFVKASMKIMFCE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf