Gcaud1815.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1815.t1
Unique NameGcaud1815.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length221
Homology
BLAST of Gcaud1815.t1 vs. uniprot
Match: A0A2V3IJU5_9FLOR (Mitochondrial inner membrane protease subunit 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJU5_9FLOR)

HSP 1 Score: 352 bits (904), Expect = 1.560e-121
Identity = 180/220 (81.82%), Postives = 192/220 (87.27%), Query Frame = 0
Query:    1 MVRLLYRLLRAFNFVGSANENQRRSAMRSSSLLRDLIVADLEKPLSYSLPLTGNAMSPIFNANVNDMRTAHDRLVIRRLSGSTQSFLNRVYVDDVVVITDPNDARRKYVRRISAMEGAQMHSVHGDPPFSIPKSHCWVERENTQADAPDSSSFGPLSLQNVIGRVMYAIRSATDHGRVKNSPYAMASDSIVLAHENVSKHFNSPPPPQSQSQSGTQDKSN 220
            M R LYRLLRAFNFVGS  ++Q R+AMRSS LLRDL+ ADLEKPLSYSLPLTGNAMSP+FN +V DM T  DRLVIRRLSGSTQSFLNRVYVDDVVVI DPND RRKYVRRI+A+EG+ MHS   DPPF IPKSHCWVEREN   DAPDS+SFGPLSLQNVIGRVMYAIRSAT+HGRVKNSPYAMASDSIVLAHEN+SKHFN PPP QSQS S  QDK N
Sbjct:    1 MARFLYRLLRAFNFVGSTTDSQMRAAMRSSILLRDLMHADLEKPLSYSLPLTGNAMSPLFNNDVKDMNTVQDRLVIRRLSGSTQSFLNRVYVDDVVVILDPNDERRKYVRRIAALEGSHMHSTQDDPPFRIPKSHCWVERENKDTDAPDSTSFGPLSLQNVIGRVMYAIRSATEHGRVKNSPYAMASDSIVLAHENISKHFN-PPPSQSQSGSQPQDKPN 219          
BLAST of Gcaud1815.t1 vs. uniprot
Match: R7QQ86_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ86_CHOCR)

HSP 1 Score: 271 bits (692), Expect = 8.160e-88
Identity = 143/217 (65.90%), Postives = 169/217 (77.88%), Query Frame = 0
Query:    1 MVRLLYRLLRAFNFVGSANENQRRSAMRSSSL---LRDLIVADLEKPLSYSLPLTGNAMSPIFNANVNDMRTAHDRLVIRRLSGSTQSFLNRVYVDDVVVITDPNDARRKYVRRISAMEGAQMHSVHGDPP-FSIPKSHCWVERENTQADA-PDSSSFGPLSLQNVIGRVMYAIRSATDHGRVKNSPYAMASDSIVLAHENVSKHFNSPPPPQSQSQ 212
            M RLLYR+LR  NFVGS  E+Q R AMRSS++   L+ +I ADL+KPLSY+LPLTGNAM+P+ NA+V DM    DRL+IRRLSG+TQSFLN VYV+DVVVI DPNDARRKYVRRI+ +EGA M S + D P F +P  HCWV R+N  A A PDS+ FGPLSL  +IGRVMYAIRSATDHGRV NS YAMASDSIVLA E ++ H + PP  +S +Q
Sbjct:   76 MARLLYRILRVVNFVGSVEESQLRGAMRSSAVMSRLQSMIAADLDKPLSYALPLTGNAMAPLLNADVPDMNAVADRLIIRRLSGNTQSFLNCVYVNDVVVIRDPNDARRKYVRRIAGLEGAHMASDNDDDPSFRVPPRHCWVARDNQDATAAPDSTLFGPLSLDYIIGRVMYAIRSATDHGRVPNSSYAMASDSIVLAQEPITMHLHPPPEEKSSAQ 292          
BLAST of Gcaud1815.t1 vs. uniprot
Match: A0A5J4YI97_PORPP (Mitochondrial inner membrane protease subunit 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YI97_PORPP)

HSP 1 Score: 145 bits (366), Expect = 5.320e-40
Identity = 78/162 (48.15%), Postives = 105/162 (64.81%), Query Frame = 0
Query:   37 IVADLEKPLSYSLPLTGNAMSPIFNANVNDMRTAHDRLVIRRLSGSTQSFLNRVYVDDVVVITDPNDARRKYVRRISAMEGAQMHSVHGD---PPFSIPKSHCWVERENTQADAPDSSSFGPLSLQNVIGRVMYAIRSATDHGRVKNSPYAMASDSIVLAHE 195
            I A+ +KPL Y L +TGN+M+P+ N N  +   A D L IRRL   T+     V+V DVVV+ DP+DARRKYVRRI A  G +M S       PPF IP +HCWV+ +N  A   DS SFG +   ++IGR +YA+++AT+H R+KNS  A A D I+L++E
Sbjct:   49 ISAEWQKPLLYKLAMTGNSMAPLLNENAREDE-ARDVLFIRRLPRPTEQ---SVFVRDVVVMRDPSDARRKYVRRIVAAAGDEMISDREPEKFPPFFIPDNHCWVQCDNPAAPTRDSRSFGAIRFDHIIGRAIYAVKNATEHYRIKNSDRATAEDDIILSYE 206          
BLAST of Gcaud1815.t1 vs. uniprot
Match: A0A7S0T6I0_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T6I0_9RHOD)

HSP 1 Score: 130 bits (326), Expect = 9.090e-35
Identity = 74/148 (50.00%), Postives = 94/148 (63.51%), Query Frame = 0
Query:   51 LTGNAMSPIFNANVNDMR--TAHDRLVIRRLSGSTQSFLNRVYVDDVVVITDPNDARRKYVRRISAMEGAQMHSVHGD-PPFSIPKSHCWVERENTQADAPDSSSFGPLSLQNVIGRVMYAIRSATDHGRVKNSPYAMASDSIVLAHE 195
            +TG+AM+P  N   +        ++L IRRL   ++     V+ DDVVV+ DP D RRKYVRRI+AM G +M S   + PPF IP +HCWV  +N     PDS  FGPL+L  +IGRV+YA R+ATDH RV+NS  AMA D  VLA E
Sbjct:    3 MTGSAMAPTINGGKDGTGGGDVKEQLWIRRLEHVSEE---SVFNDDVVVVVDPEDDRRKYVRRITAMPGEEMVSKKAEEPPFVIPDNHCWVMCDNLNGK-PDSRWFGPLALDKIIGRVLYAARNATDHARVRNSDAAMAIDDAVLAIE 146          
BLAST of Gcaud1815.t1 vs. uniprot
Match: Q84VZ6_ARATH (At2g31140 n=13 Tax=Brassicaceae TaxID=3700 RepID=Q84VZ6_ARATH)

HSP 1 Score: 106 bits (264), Expect = 6.870e-25
Identity = 62/149 (41.61%), Postives = 89/149 (59.73%), Query Frame = 0
Query:   53 GNAMSPIFNANVNDMRTAHDRLVIRRLSGSTQSFLNRVYVDDVVVITDPNDARRKYVRRISAMEGAQMHSVHGDP---PFSIPKSHCWVERENTQA---DAPDSSSFGPLSLQNVIGRVMYAIRSATDHGRVKNSPYAMASDSIVLAHE 195
            G  MSP   AN N        L+IR++  +   F   V++ D VV+ DPND+ +  VRR++A+EG +M  V GD    PF + K+ CWV  EN +    +A DS +FGP+S  +++GR +Y +R+A DHG V+NS  AM  DS +LA E
Sbjct:   57 GPEMSPTMTANENT-------LLIRKIPIANTRF---VFIGDAVVLKDPNDSDKYLVRRLAAVEGFEM--VSGDEKEEPFVLEKNQCWVTAENQELKAKEAYDSRTFGPVSTADIVGRAIYCLRTAVDHGPVRNSQTAMGQDSPILAVE 193          
BLAST of Gcaud1815.t1 vs. uniprot
Match: A0A6D2III8_9BRAS (Uncharacterized protein n=3 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2III8_9BRAS)

HSP 1 Score: 105 bits (263), Expect = 9.660e-25
Identity = 61/180 (33.89%), Postives = 98/180 (54.44%), Query Frame = 0
Query:   20 ENQRRSAMRSSSLLRDLIVADLEKPLSYSLPLTGNAMSPIFNANVNDMRTAHDRLVIRRLSGSTQSFLNRVYVDDVVVITDPNDARRKYVRRISAMEGAQM-HSVHGDPPFSIPKSHCWVERENTQA---DAPDSSSFGPLSLQNVIGRVMYAIRSATDHGRVKNSPYAMASDSIVLAHE 195
            +N  R  +    L+  ++   +   ++Y     G  M+P    N N        L++R+L      +   V++ D VV+ DPN+  +  VRR++A+EG++M  S   D PF + K  CWV  EN +    +A DS +FGP+S+ +++GR +Y +R+A DHG V NS +AM  DS +LA E
Sbjct:   24 KNHTREKLSERELIGVVLKNLVSGRITYLHSGKGQEMAPTMGTNENT-------LLVRKLPVVDTRY---VFIGDAVVLKDPNETNKYLVRRLAALEGSEMVSSDEKDEPFVLEKDQCWVVAENKEIKSKEAYDSRTFGPVSMADIVGRAIYCLRTAVDHGPVSNSEFAMEEDSPILAVE 193          
BLAST of Gcaud1815.t1 vs. uniprot
Match: A0A5A7PQD5_STRAF (Peptidase S24/S26A/S26B/S26C family protein n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7PQD5_STRAF)

HSP 1 Score: 104 bits (259), Expect = 3.870e-24
Identity = 53/126 (42.06%), Postives = 83/126 (65.87%), Query Frame = 0
Query:   74 LVIRRLSGSTQSFLNRVYVDDVVVITDPNDARRKYVRRISAMEGAQM-HSVHGDPPFSIPKSHCWVERENTQA---DAPDSSSFGPLSLQNVIGRVMYAIRSATDHGRVKNSPYAMASDSIVLAHE 195
            L++R++S +  +   +VYV DVVV+ DP D+ +  VRR++A+EG +M  S   D PF + K+HCWV  +N      ++ DS +FGP+++  ++GRV+Y +R+A DHG V NS ++   DS VLA E
Sbjct:   71 LLVRKISDADPT---KVYVGDVVVLKDPTDSDKYIVRRLAAIEGYEMVSSDESDEPFILEKNHCWVIADNENLKPKESYDSRTFGPVNMTTIVGRVIYYLRNAVDHGPVNNSDFSAGQDSPVLAME 193          
BLAST of Gcaud1815.t1 vs. uniprot
Match: A0A087GMX0_ARAAL (Uncharacterized protein n=1 Tax=Arabis alpina TaxID=50452 RepID=A0A087GMX0_ARAAL)

HSP 1 Score: 104 bits (259), Expect = 3.870e-24
Identity = 63/149 (42.28%), Postives = 88/149 (59.06%), Query Frame = 0
Query:   53 GNAMSPIFNANVNDMRTAHDRLVIRRLSGSTQSFLNRVYVDDVVVITDPNDARRKYVRRISAMEGAQMHSVHGD---PPFSIPKSHCWVERENTQA---DAPDSSSFGPLSLQNVIGRVMYAIRSATDHGRVKNSPYAMASDSIVLAHE 195
            G  M+P   A+ N        L+IR++  +   +L   +V D VV+ DPND+ +  VRR++A+EG +M  V GD    PF I K  CWV  EN +    +A DS +FGP+S  ++IGR +Y +R+A DHG V+NS  AM  DS VLA E
Sbjct:   58 GREMAPTMGAHENT-------LLIRKIPIANTRYL---FVGDAVVLKDPNDSDKYLVRRLAAVEGFEM--VSGDVKEEPFVIEKDQCWVTAENQELKANEAYDSRTFGPVSTADIIGRAIYCLRTAVDHGPVRNSDTAMGQDSPVLAVE 194          
BLAST of Gcaud1815.t1 vs. uniprot
Match: B7FH08_MEDTR (Peptidase S24/S26A/S26B/S26C family protein n=1 Tax=Medicago truncatula TaxID=3880 RepID=B7FH08_MEDTR)

HSP 1 Score: 103 bits (257), Expect = 7.460e-24
Identity = 57/126 (45.24%), Postives = 78/126 (61.90%), Query Frame = 0
Query:   74 LVIRRLSGSTQSFLNRVYVDDVVVITDPNDARRKYVRRISAMEGAQMHSV-HGDPPFSIPKSHCWVERENTQA---DAPDSSSFGPLSLQNVIGRVMYAIRSATDHGRVKNSPYAMASDSIVLAHE 195
            L++RRL    Q    RVYV DVVV+ +P       VRR++A EG +M S    D  F + K  CWV  EN +    +A DS +FGP+ + N++GRV+Y +R+A DHGRV+NSP++M  DS VL  E
Sbjct:   71 LLVRRLPIPDQK---RVYVGDVVVLKNPEKPDDYLVRRLAATEGYEMASTDEKDESFVLEKDQCWVVAENEKLKAKEAIDSRTFGPIHMTNIVGRVLYCLRNAVDHGRVQNSPFSMQKDSPVLEME 193          
BLAST of Gcaud1815.t1 vs. uniprot
Match: A0A6J0KRN9_RAPSA (mitochondrial inner membrane protease subunit 2-like n=1 Tax=Raphanus sativus TaxID=3726 RepID=A0A6J0KRN9_RAPSA)

HSP 1 Score: 102 bits (254), Expect = 7.550e-24
Identity = 56/154 (36.36%), Postives = 92/154 (59.74%), Query Frame = 0
Query:   45 LSYSLPLTGNAMSPIFNANVNDMRTAHDRLVIRRLSGSTQSFLNRVYVDDVVVITDPNDARRKYVRRISAMEGAQM-HSVHGDPPFSIPKSHCWVERENTQA--DAPDSSSFGPLSLQNVIGRVMYAIRSATDHGRVKNSPYAMASDSIVLAHE 195
            ++Y   + G  M+P   A+ N+       L++R+L      +++   V D VV+ DPN+  +  VRR++A+EG++M  S   + PF + K  CWV  +N +   +A DS +FGP+SL +++GR +Y +R+A DHG V NS ++M  DS +LA E
Sbjct:    9 ITYLHSVKGAEMAPTMGAHDNNT------LLVRKLPDVDTRYVS---VGDAVVLKDPNETHKYLVRRLAALEGSEMVSSDEKEEPFVLEKDQCWVVADNQEKSKEAYDSRTFGPVSLADIVGRAIYCMRTAVDHGPVSNSEFSMQEDSPILAVE 153          
The following BLAST results are available for this feature:
BLAST of Gcaud1815.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJU5_9FLOR1.560e-12181.82Mitochondrial inner membrane protease subunit 1 n=... [more]
R7QQ86_CHOCR8.160e-8865.90Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YI97_PORPP5.320e-4048.15Mitochondrial inner membrane protease subunit 2 n=... [more]
A0A7S0T6I0_9RHOD9.090e-3550.00Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
Q84VZ6_ARATH6.870e-2541.61At2g31140 n=13 Tax=Brassicaceae TaxID=3700 RepID=Q... [more]
A0A6D2III8_9BRAS9.660e-2533.89Uncharacterized protein n=3 Tax=Coluteocarpeae Tax... [more]
A0A5A7PQD5_STRAF3.870e-2442.06Peptidase S24/S26A/S26B/S26C family protein n=1 Ta... [more]
A0A087GMX0_ARAAL3.870e-2442.28Uncharacterized protein n=1 Tax=Arabis alpina TaxI... [more]
B7FH08_MEDTR7.460e-2445.24Peptidase S24/S26A/S26B/S26C family protein n=1 Ta... [more]
A0A6J0KRN9_RAPSA7.550e-2436.36mitochondrial inner membrane protease subunit 2-li... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.10.109.10Umud Fragment, subunit Acoord: 48..183
e-value: 6.9E-13
score: 50.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..220
NoneNo IPR availablePANTHERPTHR47040OSJNBA0068L06.9 PROTEINcoord: 24..195
IPR036286LexA/Signal peptidase-like superfamilySUPERFAMILY51306LexA/Signal peptidasecoord: 53..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_23_length_76035_cov_4.613123contigNODE_23_length_76035_cov_4.613123:17038..17700 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1815.t1Gcaud1815.t1Gracilaria caudata M_176_S67 malemRNANODE_23_length_76035_cov_4.613123 17038..17700 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1815.t1 ID=Gcaud1815.t1|Name=Gcaud1815.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=221bp
MVRLLYRLLRAFNFVGSANENQRRSAMRSSSLLRDLIVADLEKPLSYSLP
LTGNAMSPIFNANVNDMRTAHDRLVIRRLSGSTQSFLNRVYVDDVVVITD
PNDARRKYVRRISAMEGAQMHSVHGDPPFSIPKSHCWVERENTQADAPDS
SSFGPLSLQNVIGRVMYAIRSATDHGRVKNSPYAMASDSIVLAHENVSKH
FNSPPPPQSQSQSGTQDKSN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036286LexA/Signal_pep-like_sf