Gcaud1880.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1880.t1
Unique NameGcaud1880.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length280
Homology
BLAST of Gcaud1880.t1 vs. uniprot
Match: A0A2V3IKI0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKI0_9FLOR)

HSP 1 Score: 424 bits (1091), Expect = 2.490e-147
Identity = 204/278 (73.38%), Postives = 240/278 (86.33%), Query Frame = 0
Query:    2 IELASHTISLDECVPTDHAFTKSESPGLAIVDYPDASANGQLMLEYIQRRLSWSHLYGPHQPQSDLCAILAAALSAYGSPPGFSALLLDTAHDFLHVAWVGSCGFVIVRDDAIVYRSYGDRLGRSALEHALKEPHDPPPPNATTTPTPLTPDSLAAQKRPHRDTVSTSDIHVDFFSLQDNDLVIAGTDGFFSNVSERQILAFVRPVPDAEDPTLAIANATCLGSWRYDDVHFISYYLAIIAANFATATNSQPYLPFPFPPSPHLDDVTVACISSSFAL 279
            IELA+HTISLD+  PTDH   +++ P LA++DYP  S++ +LM++Y+++RL+ S +YG HQPQSDL AILA+AL+A+GSPPGFSA+L+DTA+DFLHVAWVGSCGFV+VRDD IVYRSYGD LGR ALEH+ +      P      PTPLT D+LAA+KRPH D+V  + IHVD+F+LQDNDL+IAGTDGFF+NVSERQILAFVRPVPD EDPTLAIAN+TCLGSWRYDD  FISYYLAIIAANFATATNSQPYLPFPFPPSPHLDDVTVAC+SSSFAL
Sbjct:   52 IELAAHTISLDDAAPTDHTSVQNDPPALAMLDYPAPSSDAKLMIQYMRQRLAQSRIYGVHQPQSDLRAILASALTAFGSPPGFSAMLVDTAYDFLHVAWVGSCGFVVVRDDNIVYRSYGDDLGRHALEHSFQAQAQSHPEPKIDVPTPLTTDALAARKRPHHDSVDAASIHVDYFALQDNDLIIAGTDGFFANVSERQILAFVRPVPDPEDPTLAIANSTCLGSWRYDDPQFISYYLAIIAANFATATNSQPYLPFPFPPSPHLDDVTVACMSSSFAL 329          
BLAST of Gcaud1880.t1 vs. uniprot
Match: R7Q8L2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8L2_CHOCR)

HSP 1 Score: 243 bits (619), Expect = 2.370e-75
Identity = 133/294 (45.24%), Postives = 185/294 (62.93%), Query Frame = 0
Query:    2 IELASHTI----SLDECVPTDHAFTKSESPGLAIVDYPDASANGQLMLEYIQRRLSWSHLYGPHQPQSDLCAILAAALSAYGSPPGFSALLLDTAHDFLHVAWVGSCGFVIVRDDAIVYRSYGDRLGRSALEHALKEPHDPPPP-----------NATTTPTP--LTPDSLAAQKRPHRDTVSTSDIHVDFFSLQDNDLVIAGTDGFFSNVSERQILAFVRPVPD-AEDPTLAIANATCLGSWRYDDVHFISYYLAIIAANFATATNSQPYLPFPFPPSPHLDDVTVACISSSF 277
            +EL+SH I    +     PTD  F       +A+VDY   S  G  ++  +++ LS +      + + D+   L++A+  +G+PPG S L++D + + + +AW GSCG V++RD+AIVYRSY     R ALE  L    D               +AT + T        +   ++  + T+++ +++ D+  L+DNDL+IAG+DGFFSNVSE QILAFVRP+PD AED TL+IAN+TCLGSWR DD  FISYYLAIIA NFATA NS+P+LPFPFPPSPH+DD+TV C + SF
Sbjct:   61 LELSSHYIPNSNAAQSTEPTDRNFVDENLGIMAMVDYAQPSTQGAALIRDLRQTLSHNAALYDREARMDIRRSLSSAILRHGAPPGSSVLVMDCSSNVVRLAWAGSCGIVLIRDNAIVYRSYSKAATRDALETHLGRTTDVKTEKNAKYWLSWGGSATQSATGGYYAAGLVTGARQDGQFTINSDEVYADYIELEDNDLIIAGSDGFFSNVSEGQILAFVRPLPDGAEDKTLSIANSTCLGSWRSDDTDFISYYLAIIADNFATAPNSKPHLPFPFPPSPHVDDITVMCAACSF 354          
BLAST of Gcaud1880.t1 vs. uniprot
Match: A0A1X6NM94_PORUM (Protein phosphatase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NM94_PORUM)

HSP 1 Score: 108 bits (270), Expect = 1.120e-23
Identity = 68/182 (37.36%), Postives = 97/182 (53.30%), Query Frame = 0
Query:   66 DLCAILAAALSAYGSPPGFSALLLDTAHDFLHVAWVGSCGFVIVRDDAIVYRSYGDRLGR-SALEHALKEPHDPPPPNATTTPTPLTPDSLAAQKRPHRDTVSTSDIHVDFFSLQDNDLVIAGTDGFFSNVSERQILAFVRPVPDAEDPTLAIANATCLGSWRYDDVHFISYYLAIIAANFA 246
            DL ++LA +LS    P   SALL+   H  L  A+VG+C F+++R + I++RS   R G  +AL+ A                  +   S+ A         +   I      +Q+ D+VIAG+DGFF+NVSERQ+LA +RP     D TL+IAN TCL +W  DD   ++Y LA +A  FA
Sbjct:  166 DLPSVLADSLSRVSRPKSASALLVSLDHGVLRSAYVGTCAFIVLRGEQIIFRS--PRTGSVAALKRAFV----------------VGGGSVPADPSAAVGVAAMPSIGSTTLEVQEGDVVIAGSDGFFANVSERQVLALLRPTDSPHDGTLSIANNTCLATWTSDDPVLLAYMLAHLAWTFA 329          
BLAST of Gcaud1880.t1 vs. uniprot
Match: M1VLP8_CYAM1 (Protein phosphatase n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VLP8_CYAM1)

HSP 1 Score: 97.8 bits (242), Expect = 1.330e-19
Identity = 67/199 (33.67%), Postives = 95/199 (47.74%), Query Frame = 0
Query:   62 QPQSDLCAILAAALSAYGSPPGFS-----ALLLDTAHDFLHVAWVGSCGFVIVRDDAIVYRSYGDRLGRSALEHALKEPHDPPPPNATTTPTPLTPDSLAAQKRPHRDTVSTSDIHVDFFSLQDNDLVIAGTDGFFSNVSERQILAFVRPVPDAEDPTLAIANATCLGSWRYDDVHFISYYLAIIAANFATATNSQPYL 255
            QP+ +L + L  A++    P         A  L    + L+    G+ GF+++RD  IV+ S     G                 N  T  T +T ++      P         I++D F L+  D VI GTDG F N+SE QILA V PV  A D  LA+AN TCLG++ + D   +SY LA +A NF++ TN  PY+
Sbjct:  213 QPRFELLSCLRDAVTHMRPPEAVRSVSVLAACLANNGNLLYAVRTGNIGFLVIRDQTIVFSSLNGIEG-----------------NPETQRTSITIETCTGDVVP---------IYLDVFRLRAYDTVIFGTDGLFDNISESQILALVCPVSSAYDSNLAVANRTCLGTFTHIDPVLLSYQLAQLAHNFSSCTNCDPYI 385          
BLAST of Gcaud1880.t1 vs. uniprot
Match: M2XSY6_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XSY6_GALSU)

HSP 1 Score: 85.5 bits (210), Expect = 8.240e-16
Identity = 57/162 (35.19%), Postives = 84/162 (51.85%), Query Frame = 0
Query:   85 SALLLDTAHDFLHVAWVGSCGFVIVRDDAIVYRSYGDRLGRSALEHALKEPHDPPPPNATTTPTPLTPDSLAAQKRPHRDTVSTSDIHVDFFSLQDNDLVIAGTDGFFSNVSERQILAFVRPVPDAEDPTLAIANATCLGSWRYDDVHFISYYLAIIAANFA 246
            S  ++    + L  A +G+CGFVI+RDD + Y +    L    LE A +                   +S+   K P+ +    S I  +  S+Q++D+VI G  GF  ++S  QI+A++RPV ++ D TL+IAN T LG  R DD   ISY L  IA +FA
Sbjct:  105 SCCIMKMEGERLFCATIGTCGFVIIRDDKVFYDTRPSCL--QILESAYES------------------NSIRKDKLPYLE----SHIRYNEISVQEDDVVIIGNRGFLWHISNEQIIAYLRPVSNSFDSTLSIANYTSLGYLRQDDPRMISYMLTHIAYHFA 242          
BLAST of Gcaud1880.t1 vs. uniprot
Match: A0A7S2ZYE8_9RHOD (Protein phosphatase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZYE8_9RHOD)

HSP 1 Score: 57.8 bits (138), Expect = 4.320e-6
Identity = 42/163 (25.77%), Postives = 72/163 (44.17%), Query Frame = 0
Query:   44 MLEYIQRRLSWSHLYGPHQPQSDLCAILAAALSAYGSPPGFSALLLDTAHDFLHVAWVGSCGFVIVRDDAIVYRSYGDRLGRSALEHALKEPHDPPPPNATTTPTPLTPDSLAAQKRPHRDTVSTSDIHVDFFSLQDNDLVIAGTDGFFSNVSERQILAFVRP 206
            +L+ + R++ +S    P    + +   +  ALS    P   S  +L      +  AWVGS GF+++R D IVY S    +   +LE +L E          + P PL   S                       +++ DL++  TDG + NV++ Q+L+++RP
Sbjct:   91 LLDNVVRKVLFSP---PESRWTCISTYIENALSRLTFPKFASTCILSLEDQKIRAAWVGSSGFIVLRGDKIVYSSLPSAV--ESLESSLSE--------QMSAPNPLVAKSAV-------------------IDVEEEDLIVLATDGLWDNVTDCQVLSYLRP 221          
The following BLAST results are available for this feature:
BLAST of Gcaud1880.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IKI0_9FLOR2.490e-14773.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q8L2_CHOCR2.370e-7545.24Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NM94_PORUM1.120e-2337.36Protein phosphatase n=1 Tax=Porphyra umbilicalis T... [more]
M1VLP8_CYAM11.330e-1933.67Protein phosphatase n=1 Tax=Cyanidioschyzon merola... [more]
M2XSY6_GALSU8.240e-1635.19Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A7S2ZYE8_9RHOD4.320e-625.77Protein phosphatase n=2 Tax=Rhodosorus marinus Tax... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036457PPM-type phosphatase domain superfamilyGENE3D3.60.40.10coord: 41..233
e-value: 6.9E-9
score: 37.8
IPR036457PPM-type phosphatase domain superfamilySUPERFAMILY81606PP2C-likecoord: 82..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_238_length_34707_cov_4.869829contigNODE_238_length_34707_cov_4.869829:15815..16654 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1880.t1Gcaud1880.t1Gracilaria caudata M_176_S67 malemRNANODE_238_length_34707_cov_4.869829 15815..16654 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1880.t1 ID=Gcaud1880.t1|Name=Gcaud1880.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=280bp
LIELASHTISLDECVPTDHAFTKSESPGLAIVDYPDASANGQLMLEYIQR
RLSWSHLYGPHQPQSDLCAILAAALSAYGSPPGFSALLLDTAHDFLHVAW
VGSCGFVIVRDDAIVYRSYGDRLGRSALEHALKEPHDPPPPNATTTPTPL
TPDSLAAQKRPHRDTVSTSDIHVDFFSLQDNDLVIAGTDGFFSNVSERQI
LAFVRPVPDAEDPTLAIANATCLGSWRYDDVHFISYYLAIIAANFATATN
SQPYLPFPFPPSPHLDDVTVACISSSFAL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036457PPM-type_dom_sf