Gcaud1887.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1887.t1
Unique NameGcaud1887.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length514
Homology
BLAST of Gcaud1887.t1 vs. uniprot
Match: A0A2V3IKJ4_9FLOR (DEAD-box ATP-dependent RNA helicase 39 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKJ4_9FLOR)

HSP 1 Score: 665 bits (1716), Expect = 1.580e-235
Identity = 340/491 (69.25%), Postives = 406/491 (82.69%), Query Frame = 0
Query:   15 YRQLRIRWCASVPTIAPHLHLPSI-TPDRKSFDSLGLHASIQDALSANEIIEPTNIQAQAAPILLAHRNAVIAAETGAGKTIAYLAPLISSLKHSEESANADGLSRGMSLSPMRPSILVVVPTRELSAQVFSVSKSLSHIARFRVRAAVGGPQIGRSRKRLQDSPVDLIVGTPGSIENMRNQQLLYLSRISTIVLDEADELISSSAGFGPQLTGLMNVLREKDVQFVYSAATVPTSMEIGLRRWHGGNLDVARGSRLHRATSSSQVKTTFIRVDGSEDAKLQKLMEVFSVVRKGTNSGKVLIFCDNVKRRETIVQEIRSRGTDVVHLSGEGRDRDDRNTDWDAFSSGEVWVAVCSKSFGRGIDDHKIDTVILFDVPMTGSEYLHRIGRIRGTGRAYVLVGRREQAIAEELFLSHVKGLPIAGVCPKKAWKEYTGAGRDRIATDKVLRTARSKRHARWVDERLKADGTFRGRKRQVRIK-------RDNSRE 497
            Y+ L  R  +S+ T      LPS+ +P+ KSFDS  +H SI+DAL++N IIEPT IQ  A P LL+ +NA++AAETGAGKT+AYLAPL+S LK SE+ +    L       PMRPS+LV+VPTRELSAQV SVSKSLSH+A+ RVRAAVGGPQ  R+RK L++SPVDL VGTPGS+  MR QQLLY+SR+STIVLDEADEL+S +AGFG QL GLM+ LRE++  FVY+AATVPT+ME GL+RWH GN++V R S+LHRAT SS+VKTTF+RVDG+EDAKL+KL+++FSV +   NSGKVLIFCDNV+RRE I+Q +R+RGTDVVHLSGEGRDRDDR TDW+AF  G+V VAVCSKSFGRGIDDH+I TVI+FDVPMTGSEYLHRIGRIRGTGRAY+LV RREQ IAE+LFL+HVKGLPIAGV P+KAWK YTGAGRDRIATDKV++ ARSKR+ARWVDER  ADGTFRGRKRQ+ ++       RD S+E
Sbjct:   19 YQWLHARSSSSLETSVFPRPLPSVPSPEPKSFDSWNIHPSIKDALTSNNIIEPTEIQMLATPTLLSQKNAILAAETGAGKTLAYLAPLLSLLKQSEQQSTQTRL-------PMRPSVLVLVPTRELSAQVLSVSKSLSHVAKLRVRAAVGGPQKSRARKLLRESPVDLFVGTPGSVATMREQQLLYISRVSTIVLDEADELVSPAAGFGDQLAGLMSTLRERNAHFVYAAATVPTAMETGLQRWHDGNIEVVRSSKLHRATPSSRVKTTFVRVDGAEDAKLRKLIDIFSVAKHRANSGKVLIFCDNVQRREAIMQTLRARGTDVVHLSGEGRDRDDRYTDWNAFVDGQVSVAVCSKSFGRGIDDHQIRTVIMFDVPMTGSEYLHRIGRIRGTGRAYILVSRREQPIAEDLFLAHVKGLPIAGVSPQKAWKGYTGAGRDRIATDKVVKIARSKRYARWVDERASADGTFRGRKRQISVQHMSRGKHRDESKE 502          
BLAST of Gcaud1887.t1 vs. uniprot
Match: R7Q761_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q761_CHOCR)

HSP 1 Score: 426 bits (1096), Expect = 5.330e-141
Identity = 236/489 (48.26%), Postives = 334/489 (68.30%), Query Frame = 0
Query:   22 WCASV-PTIAPHLH----LPSITPDRKSFDSLGLHASIQDALSANEIIEPTNIQAQAAPILLAHRNAVIAAETGAGKTIAYLAPLISSLKHSEESANADGLSRGMSLSPMRPSILVVVPTRELSAQVFSVSKSLSHIARFRVRAAVGGPQIGRSRKRLQDSPVDLIVGTPGSIENMRNQQLLYLSRISTIVLDEADELISSSAGFGPQLTGLMNVLREK-DVQFVYSAATVPTSMEIGLRRWHGGNLDVARGSRLHRATSSSQVKTTFIRVDGSEDAKLQKLMEVFS-VVRKGTNSGKVLIFCDNVKRRETIVQEIRSR-GTDVVHLSGEGRDRDDRNTDWDAF----SSGE-VWVAVCSKSFGRGIDDHKIDTVILFDVPMTGSEYLHRIGRIRGTGRAYVLVGRREQAIAEELFLSHVKGLPIAGVCPKKAWKEYTGAGRDRIATDKVLRTARSKRHARWVDERLKADGTFRGRKRQVRIKRDNSRE 497
            +C +V PT  P       L ++ P + +F S GLH SI  ALS+  I  PT+IQ  + P LL+ ++ ++AAETGAGKT+AYLAPL+S LK +E++      S  ++   MRP++LV+VPTREL+ QV  V+K+L+H+A+FR RAA+GG Q    ++ L+++PVD++VGTPG++ N+ +Q+L+YLS++  +V+DEAD L++   GF  Q   +++ L +K DVQFVY+ ATVP S+   + + H G L+V +G R H+A   + +KTTFIRVDG E+AKL K +E+   V+R+   + ++L+FCD  +RRE +V  +R   G +VVHL G   D  DR  DWD+F    ++GE   VAVC+KSFGRG+D H I TV+L DVP TGSEYLHR+GRIRG+G+A+VLVG REQA+AE LFL HVKG  +  + P+ AWK YT AG+DRI T+ ++  AR K  ARWVDER  A G+ R  +     +R+N  E
Sbjct:   15 FCTTVHPTALPRRRARTPLSALAP-KTTFASHGLHPSITSALSSANIHTPTSIQLLSLPPLLSRKHVLLAAETGAGKTLAYLAPLLSHLKRAEQAPQTTAGSIQVAPPCMRPTVLVLVPTRELAVQVLRVAKTLAHVAKFRARAAMGGSQRVALKRALREAPVDVLVGTPGAVNNLIDQKLIYLSKVQAVVVDEADALLAEKGGFADQTLPIVDSLGKKEDVQFVYAGATVPGSVREEIEKRHDG-LEVVKGKRFHKALGPADLKTTFIRVDGGEEAKLAKAVEIAGRVLRQKGGADRLLVFCDERERRERLVDLLREHVGENVVHLCGRN-DYQDRERDWDSFLGTKTNGEQTRVAVCAKSFGRGLDHHGIGTVLLVDVPWTGSEYLHRVGRIRGSGKAFVLVGNREQAVAEALFLGHVKGESLDSIQPRSAWKGYTTAGKDRITTEPMVNFARRKGQARWVDERPHAIGSARDAESGPNFRRNNGNE 500          
BLAST of Gcaud1887.t1 vs. uniprot
Match: A0A830HHH2_9CHLO (Uncharacterized protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HHH2_9CHLO)

HSP 1 Score: 182 bits (463), Expect = 1.110e-47
Identity = 134/410 (32.68%), Postives = 216/410 (52.68%), Query Frame = 0
Query:   44 SFDSLGLHASIQDALSANEIIEPTNIQAQAAPILLAHRNAVIAAETGAGKTIAYLAPLISSLKHSE---------ESANADGLSRGMSLS--PMRPSILVVVPTRELSAQVFSVSKSLSHIARFRVRAAVGGPQIGRSRKRLQDSPVDLIVGTPGSIENMRNQQLLYLSRISTIVLDEADELISSSAGFGPQLTGLMNVLREKDVQFVYSAATVPTSMEIGLRRWHGGNLDVARGSRLHRATSSSQVKTTFIRVDGSEDAKLQKLMEVFSVVRKGTNSGKVLIFCDNVKRRETIVQEIRSRGTDVVHLSGEGRDRDDRNTDWDAF----SSGEVWVA-VCSKSFGRGIDDHK-IDTVILFDVPMTGSEYLHRIGRIRGTGRAYVLVG---RREQAIAEELFLSHVKGLPI 433
            SF   GL+A +  A+       PT++QA A P++L   + +IA++TG+GKT+AYL P++ S+++ E         +     G ++G+ +     RP  LV+ PTREL+ Q++SV+K L H ARFR    VGG  +   R  L  +PVDL++ TP  + ++  ++ L+   + T+VLDEAD L+S  AGF    T L+  +R  D + +  +ATV  +++  L + +      A    LHR   ++  K TF+RV G +D KLQ L +  ++        +VL+FC+ V+        +   G +VV   GE   + +R    +AF    S  E   A VC+    RG+D    +D V++FD P+   EYLHR GR    G+  ++ G   +R+Q +A  +  +   G P+
Sbjct:   49 SFKQAGLNAELVQAVRELGFNVPTDVQAAALPLILQREDVLIASQTGSGKTLAYLLPIVQSMRNEEAELAKLTPEQVVERSGKNKGLFVGCRVRRPRALVIAPTRELAEQIYSVAKELGHHARFRSTLIVGGASLKVQRTVLARAPVDLVIATPKRLSDVHAEESLFFGDVKTVVLDEADTLVS--AGFNEVQT-LLERMRHPDRKSILVSATVTPAVQKLLAK-NFPQAKRAATKSLHRVPKNA--KHTFLRVPGDQD-KLQVLAD--TIRASHAKGNRVLVFCNTVQSCRAASHRLNEEGMNVVCHHGEVP-KSERARAVEAFARDGSEHEGPPAMVCTDLAARGLDFRADVDHVVMFDFPLNTVEYLHRTGRTARAGKPGLVTGLVTKRDQILAFRIEQAIQSGKPL 448          
BLAST of Gcaud1887.t1 vs. uniprot
Match: A0A7S4M911_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4M911_9EUKA)

HSP 1 Score: 179 bits (454), Expect = 1.520e-46
Identity = 142/463 (30.67%), Postives = 224/463 (48.38%), Query Frame = 0
Query:   17 QLRIRWCAS-VPTIAPHLHL----------PSITPDRKSFDSLGLHASIQDALSANEIIEPTNIQAQAAPILLAHRNAVIAAETGAGKTIAYLAPLI----------SSLKHSEESANADGLSRGMSL---------SPMRPSILVVVPTRELSAQVFSVSKSLSHIARFRVRAAVGGPQIGRSRKRLQDSPVDLIVGTPGSIENMRNQQLLYLSRISTIVLDEADELISSSAGFGPQLTGLMNVLREKD------VQFVYSAATVPTSMEIGLRRWHGGNLDVARGSRLHRATSSSQVKTTFIRVDGSEDAKLQKLMEVFSVVRKGTNSGK-VLIFCDNVKRRETIVQEIRSRGTDVVHL-SGEGRDRDDRNTDWDAFSSGEVWVAVCSKSFGRGIDDHKIDTVILFDVPMTGSEYLHR---IGRIRGTGRAYVLVGRREQAIAEEL--FLSHVKGLPIAGV 436
            QLR+  CA+ +P  AP + +           + +P+  +++SL +   +   +S   I  PT IQ  A P +L  RN + +AETG GKT+AYL PLI          ++ K  E++   D +++  S          +  RP I+V+VP REL+ QVF+ +K +           +GGP+       L     DL+V TP  I + R Q  +Y S++  +V+DEAD L+S   GF  ++  ++  LR K       VQ V ++ATV  S    L   H  +L   RG   ++ T+  +V   FIR+   E  K  KL+E+  V++      + V++FC++ K        +   G +   L SG    R  R  +W  F  GE  V VCS    RG+D  K++ V++FD P  G +YLHR    GR+  +GR   LV  ++  +A ++  ++ + K L    V
Sbjct:    5 QLRLSSCAARLPGWAPRISMRFSSFDNGKTSTSSPNEVTWESLRIPDQLLQKISHYGISSPTQIQKMAIPPILKGRNVMFSAETGTGKTLAYLLPLIQRSMEKMKKENTNKEQEKTKETDPVAKRFSKRLQKETRDKNNRRPRIIVLVPNRELAHQVFATAKQICG-GEMNCALLIGGPKRNTQASTLTKESPDLLVATPQRILHHRQQDRIYFSKMDALVIDEADVLVSEQGGFKKEIEKIVVPLRRKGEDRKSPVQVVAASATVTPSSTKFLSE-HIPDLRTIRGRNTNKPTA--KVVHDFIRIKQHE--KQDKLIELVQVLKDNMRGNEPVMVFCNSSKSCRATDHHLNENGFNASSLHSGIPPSR--RKDEWVKFRKGESQVLVCSDIAARGLDTTKVNLVVMFDFPKNGVDYLHRSGRTGRLGSSGRVVSLVNHKDDFLAAKIEEYIKYGKSLEALSV 459          
BLAST of Gcaud1887.t1 vs. uniprot
Match: A0A836CEI1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEI1_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.210e-44
Identity = 131/429 (30.54%), Postives = 213/429 (49.65%), Query Frame = 0
Query:   36 PSITPDRKS-FDSLGLHASIQDALSANEIIEPTNIQAQAAPILLAHRNAVIAAETGAGKTIAYLAPLISSLKHSEESANADGLSRGMSLSPMRPSILVVVPTRELSAQVFSVSKSLSHIARFRVRAAVGGPQIGRSRKRLQDSPVDLIVGTPGSIENMRNQQLLYLSRISTIVLDEADELISSSAGFGPQLTGLMNVLREKD----VQFVYSAATVPTSMEIGLRRWHGGNLDVARGSRLHRATSSSQVKTTFIRVDGSEDAKLQKLMEVFSVVRKGTNSG------KVLIFCDNVKRRETIVQEIRSRGTDVVHLSGEGRDRDDRNTDWDAFSSGEVWVAVCSKSFGRGIDDHKIDTVILFDVPMTGSEYLHRIGR---IRGTGRAYVLVGRREQAIAEELFLSHVKGLPIAGVCPKKAWKEYTGAGR 450
            P+  P+    + SLGL   +Q A+       P++IQ  A P + +  N V+AA TG+GKT+AYL P+I++LK  E+      LS      P RP  LV+VPTREL+AQV  V+K ++H A+       GG   G+ ++ L     D++VG+PG +   R+Q  L+LS+++ +V+DE D +++   GFGP +T L+  L  +     VQFV  +ATV  ++   L       + +     +HRA  +  +K   +   G +  KL  L+EV +      +S       + LIFC+ V     +   +R  G       GE      R     AF +G     V +    RG+D  ++  VI+FD P+   +YLHR GR   +   GR   L+ +R++ +A  +  + + G P+  +  ++   +Y   G+
Sbjct:   11 PASAPEATGEWSSLGLLPEVQGAVDNMGFATPSSIQRIAIPQITSGGNMVVAAATGSGKTLAYLLPVINALKSQEQ------LSDATVRKPGRPRALVLVPTRELAAQVLGVTKQVAHTAKVSSCGIFGGEDYGKQKRELAACQ-DVVVGSPGRLLKHRDQGTLFLSQVTHVVIDEVDTMLTQ--GFGPDITALVKPLMRRQGEDAVQFVLVSATVTAALRRLLEAGEFPKVRMVETRDVHRALPN--MKHAMVDCKGRD--KLSVLLEVLAQHGGSGSSAAAQAAARTLIFCNTVASARAVDHALRDAGVAAAAYHGEVPSAQ-RAAALAAFRAGSPPRLVATDVAARGLDLPEVGHVIMFDFPLNPVDYLHRSGRTARMGARGRVTSLLAKRDRVLAAAIEAAVLAGRPLDALTARRT--DYLPGGK 423          
BLAST of Gcaud1887.t1 vs. uniprot
Match: F0WEP4_9STRA (DEAD/DEAH box RNA helicase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WEP4_9STRA)

HSP 1 Score: 173 bits (438), Expect = 1.870e-44
Identity = 129/404 (31.93%), Postives = 206/404 (50.99%), Query Frame = 0
Query:   10 SRELLYRQLRIRWCASVPTIAPHLHLPSITPDRKS-FDSLGLHASIQDALSANEIIEPTNIQAQAAPILLAHRNAVIAAETGAGKTIAYLAPLISSLKHSEESANADGLSRGMSLSPM--RPSILVVVPTRELSAQVFSVSKSLSHIARFRVRAAVGGPQIGRSRKRLQDSPVDLIVGTPGSIENMRNQQLLYLSRISTIVLDEADELISSSAGFGPQLTGLMNVL------REKDVQFVYSAATVPTSMEIGLRRWHGGNLDVARGSRLHRATSSSQVKTTFIRVDGSEDAKLQKLMEVFSVVRKGTNSGK---VLIFCDNVKRRETIVQEIRSRGTDVVHLSGEGRDRDDRNTDWDAFSSGEVWVAVCSKSFGRGIDDHKIDTVILFDVPMTGSEYLHRIGR 401
            SR  L R+  I W     T++ H  + S TPD+KS F+   LHA++  AL  + I +PT+IQ ++   +L+  N +  A+TG GKT++Y+ P+I  +K SE +       R    +P+  RP +L+ VP+REL+ Q+ SV+K L+H  +F       G      +++L   P+D+++GTPG I     +Q  YLS+I T++LDEAD L  +  GF   L  ++  +      RE  +Q +  AAT   S+     R   G + +   ++ +R     ++K TF+RV  +  AK   L +     R G    K    +IFC+++   +     +R  G     L  +   +  R      F SG V V VC+   GRG+D   I+ VI+ D P +  +Y+HR+GR
Sbjct:    7 SRNCLGRKRSIPWT----TVSTHRLVHSNTPDQKSTFEQYSLHANLCKALHESGIHKPTSIQRKSINAVLSGHNILCLAQTGTGKTLSYMIPIIEKIKRSESAK-----LRETQAAPLISRPRVLIAVPSRELALQLGSVAKQLAHHVKFASCVVTNGEHKKVQQQKLA-RPIDILIGTPGRIVTCIKKQDFYLSQIDTLILDEADTLFDAKMGFIDDLKAILAPIQASCHKRECKLQSILVAATATKSVGRVWNRMFEG-IKLVSDNQFNRIPK--EIKQTFVRV--APQAKYTVLRDALEQHR-GRGKAKFQRTIIFCNDIASCQAAEHMLRQNGFKTASLHKDVP-KPIRQAAIQNFDSGSVPVLVCTDLGGRGLDIDSIEHVIMLDFPRSVIDYIHRVGR 393          
BLAST of Gcaud1887.t1 vs. uniprot
Match: A0A0G4J7W8_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J7W8_PLABS)

HSP 1 Score: 174 bits (440), Expect = 2.830e-44
Identity = 130/421 (30.88%), Postives = 209/421 (49.64%), Query Frame = 0
Query:   22 WCASVPTIAPHLHLPSITPDRKSFDSLGLHASIQDALSANEIIEPTNIQAQAAPILLAHRNAVIAAETGAGKTIAYLAPLISSLKHSEESANADGLSRGMSLSPMRPSILVVVPTRELSAQVFSVSKSLSHIARFRVRAAVGGPQIGRSRKRLQDSPVDLIVGTPGSIENMRNQQLLYLSRISTIVLDEADELISSSAGFGPQL-TGLMNVLREKD-------VQFVYSAATVPTSMEIGLRRWHGGNLDVARGSRLHRATSSSQVKTTFIRVDGSEDAKLQKLMEVFSVVRKGTNSGKVLIFCDNVKRRETIVQEIRSRG-TDVVHLSGEGRDRDDRNTDWDAFSSGEVWVAVCSKSFGRGIDDHKIDTVILFDVPMTGSEYLHRIGRIR---GTGRAYVLVGRREQAIAEELFLSHVKG 430
            WC         L   +   DR SF  LGL+ S+ DAL+  +I  PT IQA+  P +LA ++ ++A +TG GKT+AYLAP++  +K+ +          G+     +P  +VVVP+REL+ QV +V+K LSH  +  VR  +GG +I   R  L  SP+DL++GTPG I  +   +   L  +  +V+DEAD L     GF  +L  GL+  +R          VQF+  +AT+   +   L+    G ++     +LHR  S+  V   F+ + G+ D K++ L+     +        V+IFC+       +   +   G ++   L G+   +  R  ++  F+SGE  + V S    RG+D      V++FD P+   ++LHR GR      TG     V +R+Q +A  +  +  +G
Sbjct:   10 WCLGSRVARTFLRRMATAADRASFAGLGLNTSVCDALTDMKIATPTWIQAEVIPRVLARKDVLLADQTGTGKTLAYLAPVMQLIKNIDADT-------GVMACAGKPRGVVVVPSRELAVQVANVAKMLSHHLKLSVRVMLGGAKIRVQRSDLS-SPIDLVIGTPGRIRKLVYTRDCRLGDVQFVVIDEADTLFDPKCGFLDELDAGLLTPVRNLKAKAKGGPVQFILVSATMRQQVVADLQAGFPG-IETVLSQKLHRLPSAMTVD--FVGI-GARD-KVEVLVSTLRQMTTRPIHDPVVIFCNTTDSCRAVDHALHDSGFSNTACLHGDILPKT-RRENFTKFTSGEKSILVTSDVAFRGLDFPTKTRVVMFDFPLNPCDFLHRAGRTARAGSTGVVVAFVSKRDQVLARAIKNAMARG 416          
BLAST of Gcaud1887.t1 vs. uniprot
Match: A0A2P4Y4S2_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y4S2_9STRA)

HSP 1 Score: 171 bits (432), Expect = 1.080e-43
Identity = 128/402 (31.84%), Postives = 206/402 (51.24%), Query Frame = 0
Query:   43 KSFDSLGLHASIQDALSANEIIEPTNIQAQAAPILLAHRNAVIAAETGAGKTIAYLAPLISSLKHSEESANADGLSRGMSLSPM-----RPSILVVVPTRELSAQVFSVSKSLSHIARFRVRAAVGGPQIGRSRKRLQDSP----VDLIVGTPGSIENMRNQQLLYLSRISTIVLDEADELISSSAGFGPQLTGLMNVL------REKDVQFVYSAATVPTSMEIGLRRWHGGNLDVARGSRLHRATSSSQVKTTFIRVDGSEDAKLQKLMEVFSVVRKGTNSGKVLIFCDNVKRRETIVQEIRSRG-TDVVHLSGEGRDRDDRNTDWDAFSSG-EVWVAVCSKSFGRGIDDHKIDTVILFDVPMTGSEYLHRIGRIRGTGRAYVLVGRREQAIAEELFLSH 427
            +SF+ LG+ A I   L   +I  PT IQ+++ P +LA  + + AA+TG GKT+AYL P++  +  +E +   +  ++G S  P      RP  LV++P+REL+ QV SV+K LSH A+F       G      RK +Q       +DL++GTPG +    ++   ++SRI T+V+DEAD L  +  GF  +L  ++  +      R + +Q + +AAT+ + ++  L++  G  L V     +H+  SS  ++  F+RV+   ++K   L E   + R+   + K +IFC N     +    +R  G  D V L G+      R+    AF+    V + VC+    RG+D   +  VI+FD P +  +Y+HR GR   TGRA       EQ +   L   H
Sbjct:   30 RSFNDLGVDARIVAGLQEMKISTPTGIQSKSIPAILARHDVLCAAQTGTGKTLAYLVPVVEQILRTEAAKQKEHEAKGQS-GPAEVVLGRPCALVLLPSRELALQVASVAKQLSHSAKFASCTVTSG-----ERKSIQQRNTARRLDLVIGTPGRVAKCISKGDFFVSRIDTVVVDEADTLFDAKMGFRKELDAVLGPIQASAAKRNQPLQMILAAATIRSPIDQVLKKKFG-QLRVVSDDEIHKTPSS--IREEFVRVN--PESKHSALREALHLHRR--RAAKTMIFCRNSASVRSTEHMLREHGFQDTVCLHGDMPPAR-RHDAIHAFTEDPNVNILVCTDLAARGLDVESVKHVIMFDFPKSAVDYVHRAGR---TGRA------GEQGLVTSLVTKH 408          
BLAST of Gcaud1887.t1 vs. uniprot
Match: M4B7I8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B7I8_HYAAE)

HSP 1 Score: 170 bits (431), Expect = 2.810e-43
Identity = 124/394 (31.47%), Postives = 198/394 (50.25%), Query Frame = 0
Query:   33 LHLPSITPDRKS-------FDSLGLHASIQDALSANEIIEPTNIQAQAAPILLAHRNAVIAAETGAGKTIAYLAPLISSLKHSEESANADGLSRG----MSLSPMRPSILVVVPTRELSAQVFSVSKSLSHIARFRVRAAVGGPQIGRSRKRLQDSPVDLIVGTPGSIENMRNQQLLYLSRISTIVLDEADELISSSAGFGPQLTGLMNVL------REKDVQFVYSAATVPTSMEIGLRRWHGGNLDVARGSRLHRATSSSQVKTTFIRVDGSEDAKLQKLMEVFSVVRKGTNSGKVLIFCDNVKRRETIVQEIRSRG-TDVVHLSGEGRDRDDRNTDWDAFSSGEVWVAVCSKSFGRGIDDHKIDTVILFDVPMTGSEYLHRIGRIRGTGRA 408
            L  PS++P   +       F  LGL A +   L+   I  PT IQA++ P +LA  N +  A+TG GKT+AYLAP++  L   E +      S+G    + +   RP  LV++P+REL+ QV SV+K LSH A+F       G +    +K      +DL++GTPG +    +    ++SRI T+V+DEAD +  +  GF  +L  ++  +      R + +Q + +AAT+ + ++  L++   G L V    ++H+  ++  +K  F+RV    ++K   L E   + R+   + K +IFC N     +    +R  G  + V L G+      R+          V V VC+    RG+D   +  VI+FD P T  +Y+HR GR   TGRA
Sbjct:   46 LQWPSLSPLASNRLFSVLTFQDLGLDARLVSGLNEKHITTPTGIQAKSIPAILARTNVLCTAQTGTGKTLAYLAPVVEQLLRKEAAKQKQYESQGNEGPIEVVRGRPGALVLLPSRELALQVASVAKQLSHSAKFASCTVTSGERKSIQQKNTARR-LDLVIGTPGRVAKCISMGDFFISRIDTVVVDEADTMFDAKMGFRKELDAVLGPIQASAAKRNQPLQVILAAATIRSPIDQVLKKKFNG-LRVVSDDKIHKTPTT--IKEEFVRV--IPESKHSALRETLRLRRR--YAAKTMIFCRNSASVRSTEHMLREHGFQESVCLHGDMPPARRRDAIQAFTEDANVNVLVCTDLAARGLDFDLVKHVIIFDFPKTAVDYVHRAGR---TGRA 428          
BLAST of Gcaud1887.t1 vs. uniprot
Match: A0A225WU71_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WU71_9STRA)

HSP 1 Score: 169 bits (428), Expect = 3.880e-43
Identity = 127/402 (31.59%), Postives = 203/402 (50.50%), Query Frame = 0
Query:   43 KSFDSLGLHASIQDALSANEIIEPTNIQAQAAPILLAHRNAVIAAETGAGKTIAYLAPLISSLKHSEESANADGLSRGMSLSPM-----RPSILVVVPTRELSAQVFSVSKSLSHIARFRVRAAVGGPQIGRSRKRLQDSP----VDLIVGTPGSIENMRNQQLLYLSRISTIVLDEADELISSSAGFGPQLTGLMNVL------REKDVQFVYSAATVPTSMEIGLRRWHGGNLDVARGSRLHRATSSSQVKTTFIRVDGSEDAKLQKLMEVFSVVRKGTNSGKVLIFCDNVKRRETIVQEIRSRG-TDVVHLSGEGRDRDDRNTDWDAFSSG-EVWVAVCSKSFGRGIDDHKIDTVILFDVPMTGSEYLHRIGRIRGTGRAYVLVGRREQAIAEELFLSH 427
            +SF  LG+ A I   L   +I  PT IQA++ P +LA  + + AA+TG GKT+AYL P++  +   E +   +   +  S  P      RP  LV++P+REL+ QV SV+K LSH A+F       G      RK +Q       +DL++GTPG +    ++   ++SRI T+V+DEAD L  +  GF  +L  ++  +      R + +Q + +AAT+ + ++  L++  G  L V     +H+  ++  +K  F+RV+   ++K   L EV  + R+   + K +IFC N     +    +R  G  D V L G+      R+    AF+    V + VC+    RG+D   +  V++FD P +  +Y+HR GR   TGRA       EQ +   L   H
Sbjct:   29 RSFHELGVDARIVAGLQEMKITSPTGIQAKSIPAILARHDVLCAAQTGTGKTLAYLVPVVEQILRKEAAKQKEQQMKNQS-GPAEVVLGRPCALVLLPSRELALQVASVAKQLSHSAKFASCTITSG-----ERKSIQQRNTARRLDLVIGTPGRVAKCISKGDFFVSRIDTVVVDEADTLFDAKMGFRKELDAVLGPIQASAAKRNQPLQMILAAATIRSPIDQVLKKKFG-ELRVVSDDEIHKTPTT--IKEEFVRVN--PESKHSALREVLHLHRR--RAAKTMIFCRNSASVRSTEHMLREHGFQDAVCLHGDMPPAR-RHDSIHAFTGDPNVNILVCTDLAARGLDVESVKHVVMFDFPKSAVDYVHRAGR---TGRA------GEQGLVTSLVTKH 407          
The following BLAST results are available for this feature:
BLAST of Gcaud1887.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IKJ4_9FLOR1.580e-23569.25DEAD-box ATP-dependent RNA helicase 39 n=1 Tax=Gra... [more]
R7Q761_CHOCR5.330e-14148.26Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A830HHH2_9CHLO1.110e-4732.68Uncharacterized protein n=2 Tax=Pycnococcus provas... [more]
A0A7S4M911_9EUKA1.520e-4630.67Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A836CEI1_9STRA1.210e-4430.54DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
F0WEP4_9STRA1.870e-4431.93DEAD/DEAH box RNA helicase putative n=1 Tax=Albugo... [more]
A0A0G4J7W8_PLABS2.830e-4430.88Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A2P4Y4S2_9STRA1.080e-4331.84DEAD/DEAH box RNA helicase n=1 Tax=Phytophthora pa... [more]
M4B7I8_HYAAE2.810e-4331.47Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A225WU71_9STRA3.880e-4331.59DEAD/DEAH box RNA helicase n=1 Tax=Phytophthora me... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 324..405
e-value: 7.5E-6
score: 35.4
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 294..402
e-value: 1.1E-12
score: 48.2
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 296..444
score: 12.620195
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 62..280
e-value: 6.7E-34
score: 128.6
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 74..251
score: 18.663841
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 266..429
e-value: 9.0E-26
score: 92.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 29..258
e-value: 1.1E-51
score: 177.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 36..250
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 200..414
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 67..249
e-value: 4.9E-33
score: 114.3
NoneNo IPR availablePANTHERPTHR47960DEAD-BOX ATP-DEPENDENT RNA HELICASE 50coord: 43..421
NoneNo IPR availableCDDcd00268DEADccoord: 54..251
e-value: 4.96605E-48
score: 162.996
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 207..215
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 43..71
score: 9.641493

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_238_length_34707_cov_4.869829contigNODE_238_length_34707_cov_4.869829:31449..32990 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1887.t1Gcaud1887.t1Gracilaria caudata M_176_S67 malemRNANODE_238_length_34707_cov_4.869829 31449..32990 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1887.t1 ID=Gcaud1887.t1|Name=Gcaud1887.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=514bp
MIRRFLAWSSRELLYRQLRIRWCASVPTIAPHLHLPSITPDRKSFDSLGL
HASIQDALSANEIIEPTNIQAQAAPILLAHRNAVIAAETGAGKTIAYLAP
LISSLKHSEESANADGLSRGMSLSPMRPSILVVVPTRELSAQVFSVSKSL
SHIARFRVRAAVGGPQIGRSRKRLQDSPVDLIVGTPGSIENMRNQQLLYL
SRISTIVLDEADELISSSAGFGPQLTGLMNVLREKDVQFVYSAATVPTSM
EIGLRRWHGGNLDVARGSRLHRATSSSQVKTTFIRVDGSEDAKLQKLMEV
FSVVRKGTNSGKVLIFCDNVKRRETIVQEIRSRGTDVVHLSGEGRDRDDR
NTDWDAFSSGEVWVAVCSKSFGRGIDDHKIDTVILFDVPMTGSEYLHRIG
RIRGTGRAYVLVGRREQAIAEELFLSHVKGLPIAGVCPKKAWKEYTGAGR
DRIATDKVLRTARSKRHARWVDERLKADGTFRGRKRQVRIKRDNSREGDY
LLVRYNSRRRNAP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR000629RNA-helicase_DEAD-box_CS
IPR014014RNA_helicase_DEAD_Q_motif