Gcaud1884.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1884.t1
Unique NameGcaud1884.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length567
Homology
BLAST of Gcaud1884.t1 vs. uniprot
Match: A0A2V3IKE1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKE1_9FLOR)

HSP 1 Score: 415 bits (1067), Expect = 3.400e-138
Identity = 204/312 (65.38%), Postives = 257/312 (82.37%), Query Frame = 0
Query:  251 WLPPSVATVTDNSTGSKIYIVGCVHGSNFSANDVCQVLDRTDPDAIVLELCEPRLKALRKTIAKKDEGSQYAANIGARTKKSFAQLSKSFGGRGPAIVALVLEKVYEFQTLVGIDPGIEFVEPIVRFPPNRIICGDVLARDTVNALFRVFAAPFRSLNDCFSSVVDIFNRVMFPPQGGVQMLLVFLRSPGRLLELLRLIFPASLVAILIGLVGNAGAFAFDMTPIGASVSHPVFAASLASLSSLVDSLLLAYVSVSLLRFTKVLIADRDKVLSESVLNTLSSFRKGQGAPVTVCVVVGLLHVNGILRILQKR 562
            WLPPSVATVTD STG++IYIVGCVHGSN SANDV  VLD TDP+A+VLELCEPRLK+L KTIA+K     +AANI AR +KSFAQL ++FGG GPA VA++LEKVYEFQTLVG+DPGIEFVEPIVRFP +R+ICGD LA+DTV ALF+ FAAP RSL+DC  S+ D+ NRV+FPP+GGV+M  +FLR P RLLEL RLI PA +++I+IG++GNAGA A D+ PI  S + P+ +   +S++S++ +LL+AY +VSLLRF KVLI DRD+V+++++++  SSF+  +G P T+CVVVGL HVNGILRILQ R
Sbjct:   72 WLPPSVATVTDCSTGTRIYIVGCVHGSNVSANDVRTVLDTTDPEAVVLELCEPRLKSLLKTIARKSADQPFAANIKARKRKSFAQLKEAFGGAGPAAVAVILEKVYEFQTLVGVDPGIEFVEPIVRFPSDRVICGDALAKDTVKALFKAFAAPLRSLSDCIYSIKDLLNRVVFPPKGGVRMFSIFLRDPVRLLELFRLILPAGVLSIIIGVIGNAGALALDLAPISGSTTPPLVSLWSSSVASVLQTLLIAYFNVSLLRFMKVLIPDRDQVIAQNIVSAASSFKTARGDPATICVVVGLFHVNGILRILQDR 383          
BLAST of Gcaud1884.t1 vs. uniprot
Match: A0A2V3IKG4_9FLOR (NAD(P)-bd_dom domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKG4_9FLOR)

HSP 1 Score: 352 bits (902), Expect = 3.020e-115
Identity = 172/225 (76.44%), Postives = 194/225 (86.22%), Query Frame = 0
Query:   25 RIQLCAKVSSPPADILVVAANRGLGAHLCRALRDADNLHTTHRPCSATSSEQEQASTTHALDALDGSAAEALFQSLKPRTVVSCIGGEPGALELPDFEGNKNLIDAARRASVRHFVLISALGAGNSEGSVPFQVMDTLRPLLLEKSRAEAYLKKTPDMEWTIVRPAPIVDGKGGKPVATEDVSCYGTITRPDLAGVVKRILASEKAKNKTLHVVDRTGLLIVAPY 249
            R Q+CAKVSSPPADIL+VAANRGLGAHL  ALR  +NLHTTHRPCS+ S+EQ+Q STTH LDALD S  +AL   L+P  VVSCIGG  G  +LPDFEGNKNLIDA++RA V+ F+L+SALGAGNSEGSVPFQVMDT+RPLLLEKSRAE +LK+   MEWTIVRPAPIVDG  GKPVATED+SCYGTITRPDLA VVK+I+ S+KA NKTLH+VDRTGLLIVAPY
Sbjct:   25 RTQVCAKVSSPPADILIVAANRGLGAHLSTALRGTENLHTTHRPCSSASAEQQQVSTTHPLDALDESETDALLSGLRPNVVVSCIGGRAGQWDLPDFEGNKNLIDASKRAGVKRFILVSALGAGNSEGSVPFQVMDTMRPLLLEKSRAELHLKEIEGMEWTIVRPAPIVDGGRGKPVATEDISCYGTITRPDLAEVVKKIIGSDKASNKTLHIVDRTGLLIVAPY 249          
BLAST of Gcaud1884.t1 vs. uniprot
Match: R7QA69_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA69_CHOCR)

HSP 1 Score: 212 bits (539), Expect = 3.300e-61
Identity = 116/240 (48.33%), Postives = 159/240 (66.25%), Query Frame = 0
Query:  328 RTKKSFAQLSKSFGGRGPAIVALVLEKVYEFQTLVGIDPGIEFVEPIVRFPPNRIICGDVLARDTVNALFRVFAAPFRSLNDCFSSVVDIFNRVMFPPQGGVQMLLVFLRSPGRLLELLRLIFPASLVAILIGLVGNAGAFAFDMTP-IGASVSHPVFAASLASL-SSLVDSLLLAYVSVSLLRFTKVLIADRDKVLSESVLNTLSSFRKGQGAPVTVCVVVGLLHVNGILRILQKRIES 565
            R  ++F ++SK+FGG GPA++A +LE VY  Q L G+ PG EF E I R  P +I+CGD  ARDT+  L+ VF  P RSL D  SS+ +I  R++ PP+ GV ML +FL  P R+LEL+RL FPA +++  I L GNAGA A D  P I  S+    +A +L  + +SL  +L ++Y+ VS LRF KVLIADRD+ L++S+L T S  +     PV +C VVGLLHVNGI+R +Q + E+
Sbjct:   12 RKPRTFEEVSKTFGGTGPAVIAFILESVYNLQILSGVQPGAEFYEAIRREGPWKIVCGDAPARDTIQNLYGVFGNPLRSLRDSLSSIEEIVGRLILPPKDGVTMLGLFLLEPRRVLELVRLTFPALVISSAISLAGNAGALALDSAPSIPISMLSEGYATTLLPIVASLGQTLTMSYIIVSTLRFMKVLIADRDRFLTKSILETASEIQSTHERPVVICAVVGLLHVNGIVRQIQGQSEA 251          
BLAST of Gcaud1884.t1 vs. uniprot
Match: A0A7S1TDL5_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TDL5_9RHOD)

HSP 1 Score: 139 bits (349), Expect = 2.800e-33
Identity = 77/183 (42.08%), Postives = 115/183 (62.84%), Query Frame = 0
Query:   72 TSSEQ----EQASTTHALDALDGSAAEALFQSLKPRTVVSCIGGEPGALELPDFEGNKNLIDAARRASVRHFVLISALGAGNSEGSVPFQVMDTLRPLLLEKSRAEAYLKKTPDMEWTIVRPAPIVDGKG-GKPVATEDVSCYGTITRPDLAGVVKRILASEKAKNKTLHVVDRTGLLIVAPY 249
            TSSE+    + +S + A++  + +A E  F+ ++P  +VSCI G        DF GN NL+D      VR F+++SALGAG+SE  VPFQVMDT+R LL++KSRAE YLK++  +E+ I+RP P+ +    G  V TE    YG+IT  DLA ++ + + S +  N+TLH +D+  +L  +PY
Sbjct:  109 TSSEEIGSVDGSSISVAVNVREKTALEKAFRRIRPSVIVSCIEGRTDDESRLDFLGNTNLVDVGIEIGVRRFIMVSALGAGDSESIVPFQVMDTMRSLLMDKSRAELYLKQS-GLEYVIIRPGPLENEPARGSAVFTESRQGYGSITTEDLASLICQAIESPRVANRTLHSMDKARVLHTSPY 290          
BLAST of Gcaud1884.t1 vs. uniprot
Match: A0A7C3KFJ2_9CYAN (SDR family oxidoreductase n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3KFJ2_9CYAN)

HSP 1 Score: 134 bits (337), Expect = 1.690e-32
Identity = 84/210 (40.00%), Postives = 123/210 (58.57%), Query Frame = 0
Query:   37 ADILVVAANRGLGAHLCRALRDADNLHTTHRPCSATSSEQEQASTTHAL-DALDGSAAEALFQSLKP-RTVVSCIGGEPGALELPDFEGNKNLIDAARRASVRHFVLISALGAGNSEGSVPFQVMDTLRPLLLEKSRAEAYLKKTPDMEWTIVRPAPIV-DGKGGKPVATEDVSCYGTITRPDLAGVVKRILASEKAKNKTLHVVDRTGL 243
            A +LV  A+RG+G  + + LR+ D   T      A  +E E      AL DAL+  A EA      P   ++S IGG P   E  D++GNK+LIDAA +A V+HF+L+S++GAG S  ++P  V++ L  +L EK  AE YL  +  + +TI+RP  ++ +  GG+ V TED    G+I R D+A +V + L SE+AKN+    VDR+ L
Sbjct:    5 AHVLVAGASRGVGREVVKCLREQDQTVTALLRSEAARAELEAMGVAIALADALNVEAVEAALLEAPPIDALISTIGGLPSEGERADYKGNKHLIDAAVKAGVKHFILVSSIGAGKSVDALPPHVLEALGEVLKEKELAEDYLMAS-GLPYTIIRPGGLLSEPSGGEAVLTEDYRVAGSIRRADVATLVCQCLTSERAKNRVFSAVDRSKL 213          
BLAST of Gcaud1884.t1 vs. uniprot
Match: K9VDH8_9CYAN (Short-chain dehydrogenase/reductase SDR n=8 Tax=Cyanobacteria TaxID=1117 RepID=K9VDH8_9CYAN)

HSP 1 Score: 124 bits (312), Expect = 4.950e-29
Identity = 80/207 (38.65%), Postives = 118/207 (57.00%), Query Frame = 0
Query:   37 ADILVVAANRGLGAHLCRALRDADNLHTTHRPCSATSSEQEQASTTHAL-DALDGSAAEALFQSLKP-RTVVSCIGGEPGALELPDFEGNKNLIDAARRASVRHFVLISALGAGNSEGSVPFQVMDTLRPLLLEKSRAEAYLKKTPDMEWTIVRPAPIVDGKG-GKPVATEDVSCYGTITRPDLAGVVKRILASEKAKNKTLHVVDR 240
            + I +  A+RG+G  + + L       T      ATS+E E         DALD +A EA     +P    +S IGG P   E  D+ GNKNLIDAA +A V+ F+L+S++G+GNS G++P Q ++TLRP+L+EK +AE +L  +  M +T++RP  +      G  + TED    GTI R D+A +V + L S+ A NK +  VD+
Sbjct:    5 SHIFLAGASRGVGLEIAKCLAAQKMQVTALLRSPATSTELEAMGIKVVTGDALDAAAMEAAMAGGEPIHAAISTIGGLPKDGERADYLGNKNLIDAALKAGVQKFILVSSIGSGNSVGALPPQALETLRPVLIEKEKAENHLIAS-GMIYTVIRPGGLKSEPATGNGILTEDCRVSGTIHRADVAQLVCQCLVSDAANNKVVSAVDK 210          
BLAST of Gcaud1884.t1 vs. uniprot
Match: A0A0N7Z4G0_9CYAN (Flavin reductase n=2 Tax=unclassified Leptolyngbya TaxID=2650499 RepID=A0A0N7Z4G0_9CYAN)

HSP 1 Score: 124 bits (310), Expect = 1.040e-28
Identity = 77/206 (37.38%), Postives = 116/206 (56.31%), Query Frame = 0
Query:   39 ILVVAANRGLGAHLCRALRDADNLHTTHRPCSATSSEQEQASTTHALDALDGSAAEALFQSLKPRTVVSCIGGEPGALELPDFEGNKNLIDAARRASVRHFVLISALGAGNSEGSVPFQVMDTLRPLLLEKSRAEAYLKKTPDMEWTIVRPAPIVDGKG-GKPVATEDVSCYGTITRPDLAGVVKRILASEKAKNKTLHVVDRTGL 243
            ILV  A+RG+G  + R L+    +    R  SA +  +     T   DA++    EA FQ      V+S IGG P      DFEGN+NLIDAA++A+V+ FVL++++GAG S  ++P   ++ L  +L +K +AE +L ++  + +TIVRP  +      G  + TED    G+I R D+A +V R L S++A  K L  +DRT L
Sbjct:   13 ILVAGASRGVGREIARLLQPHFTVVALLRSNSAVTELEALGVQTVIGDAMESEQLEAAFQGRSIDAVISTIGGLPAESRRADFEGNRNLIDAAKKANVKKFVLVTSIGAGESVVALPPGALEALGAVLKDKEKAEQHLIES-GLTYTIVRPGGLKSEPATGTGILTEDPKLAGSINRADVAELVSRCLVSDRANQKVLSALDRTQL 217          
BLAST of Gcaud1884.t1 vs. uniprot
Match: UPI001F477F29 (SDR family oxidoreductase n=1 Tax=Tychonema sp. BBK16 TaxID=2699888 RepID=UPI001F477F29)

HSP 1 Score: 123 bits (308), Expect = 1.770e-28
Identity = 81/210 (38.57%), Postives = 117/210 (55.71%), Query Frame = 0
Query:   34 SPPADILVVAANRGLGAHLCRALRDADNLHTTHRPCSATSSEQEQASTTHAL-DALDGSAAEALFQSLKP-RTVVSCIGGEPGALELPDFEGNKNLIDAARRASVRHFVLISALGAGNSEGSVPFQVMDTLRPLLLEKSRAEAYLKKTPDMEWTIVRPAPIVDGKG-GKPVATEDVSCYGTITRPDLAGVVKRILASEKAKNKTLHVVDR 240
            S    + +  A+RG+G  + + L   +   T       TSSE         L DALD +A EA      P   V+S IGG P   E  D+ GNKNLIDAA +A V+ F+L+S++G+GNS G++P Q ++TL P+L+EK +AE +L  +  M +T++RP  +      G  + TED    GTI R D+A +V + L S+ A NK L  VD+
Sbjct:    2 SEKLHVFLAGASRGVGKEIAKCLTGQNIEVTAFMRSPETSSELTALGIKVTLGDALDSAAIEAAMTGGAPIYAVISTIGGLPKDGERADYLGNKNLIDAAVKAGVQKFILVSSIGSGNSAGALPPQALETLGPVLIEKEKAENHLIAS-GMIYTVIRPGGLKSEPATGNGILTEDCRVAGTIHRADVAQLVCQCLVSDAANNKVLSAVDK 210          
BLAST of Gcaud1884.t1 vs. uniprot
Match: A0ZDD4_NODSP (Flavin reductase n=3 Tax=Nodularia spumigena TaxID=70799 RepID=A0ZDD4_NODSP)

HSP 1 Score: 122 bits (307), Expect = 2.490e-28
Identity = 84/209 (40.19%), Postives = 119/209 (56.94%), Query Frame = 0
Query:   39 ILVVAANRGLGAHLCRALRDADNLHTTH--RPCSATSSEQEQASTTHALDALDGSAAEALFQSLKP-RTVVSCIGGEPGALELPDFEGNKNLIDAARRASVRHFVLISALGAGNSEGSVPFQVMDTLRPLLLEKSRAEAYLKKTPDMEWTIVRPAPIVDGKG-GKPVATEDVSCYGTITRPDLAGVVKRILASEKAKNKTLHVVDRTGL 243
            I +  A+RG+G  + + L  A NL      R  SA +  +     T   DALD S  E    + +P  TV+S IGG P   E  DF GNKN+IDAA +A V  F+L+S++G GNS G++P Q + TL P+L+EK +AE +L  T  + +TI+RP  +      G  + TED    GTI RPD+A +V + L S+++  KTL  VD+  L
Sbjct:    7 IFLAGASRGVGREIAKYL-SAQNLQVKALLRNESAVAELESMGIETVMGDALDISDVERAIIADQPIHTVISTIGGLPSEGERADFLGNKNIIDAAVKAGVHRFILVSSIGTGNSAGALPPQALATLGPVLVEKDKAEQHLI-TSGLIYTIIRPGGLKSEPATGNGILTEDPRIVGTIHRPDVAELVCKSLNSQRSHYKTLSAVDKNML 213          
BLAST of Gcaud1884.t1 vs. uniprot
Match: A0A8J7ACG2_9CYAN (SDR family oxidoreductase n=4 Tax=Nostocales TaxID=1161 RepID=A0A8J7ACG2_9CYAN)

HSP 1 Score: 122 bits (305), Expect = 4.700e-28
Identity = 80/205 (39.02%), Postives = 116/205 (56.59%), Query Frame = 0
Query:   39 ILVVAANRGLGAHLCRALRDADNLHTTHRPCSATSSEQEQASTTHAL-DALDGSAAEALFQSLKP-RTVVSCIGGEPGALELPDFEGNKNLIDAARRASVRHFVLISALGAGNSEGSVPFQVMDTLRPLLLEKSRAEAYLKKTPDMEWTIVRPAPIV-DGKGGKPVATEDVSCYGTITRPDLAGVVKRILASEKAKNKTLHVVDR 240
            I +  A+RG+G  +   L              AT++E E       L DAL+ S  E    + +P   V+S +GG P  +E PD+ GNKNLIDAA +A ++ F+L+S++G GNS  +VP QV+ TL P+L EK +AE +L  +  + +TI+RP  +  D   G  + +ED    GTI R D+A +V R L S++A NK L  VDR
Sbjct:    7 IFLAGASRGVGREIANYLTAQSLKVKALLRKEATAAELEAIGVQVVLGDALNVSDVERAILTDEPIHAVISTLGGLPTDVERPDYSGNKNLIDAAVKAGIKKFILVSSIGTGNSAVAVPPQVLQTLGPVLAEKDKAEQHLIAS-GLTYTIIRPGGLKSDPATGNGILSEDPRIVGTINRADVAQLVCRCLNSDRANNKVLSAVDR 210          
The following BLAST results are available for this feature:
BLAST of Gcaud1884.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IKE1_9FLOR3.400e-13865.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IKG4_9FLOR3.020e-11576.44NAD(P)-bd_dom domain-containing protein n=1 Tax=Gr... [more]
R7QA69_CHOCR3.300e-6148.33Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1TDL5_9RHOD2.800e-3342.08Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7C3KFJ2_9CYAN1.690e-3240.00SDR family oxidoreductase n=1 Tax=Oscillatoriales ... [more]
K9VDH8_9CYAN4.950e-2938.65Short-chain dehydrogenase/reductase SDR n=8 Tax=Cy... [more]
A0A0N7Z4G0_9CYAN1.040e-2837.38Flavin reductase n=2 Tax=unclassified Leptolyngbya... [more]
UPI001F477F291.770e-2838.57SDR family oxidoreductase n=1 Tax=Tychonema sp. BB... [more]
A0ZDD4_NODSP2.490e-2840.19Flavin reductase n=3 Tax=Nodularia spumigena TaxID... [more]
A0A8J7ACG2_9CYAN4.700e-2839.02SDR family oxidoreductase n=4 Tax=Nostocales TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 39..243
e-value: 1.8E-29
score: 105.0
NoneNo IPR availablePANTHERPTHR15020FLAVIN REDUCTASE-RELATEDcoord: 38..241
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 471..481
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 509..566
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 437..447
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 482..508
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..416
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 448..470
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 417..436
NoneNo IPR availableTMHMMTMhelixcoord: 483..505
NoneNo IPR availableTMHMMTMhelixcoord: 537..559
NoneNo IPR availableTMHMMTMhelixcoord: 448..470
IPR016040NAD(P)-binding domainPFAMPF13460NAD_binding_10coord: 44..227
e-value: 5.7E-23
score: 81.7
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 39..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_238_length_34707_cov_4.869829contigNODE_238_length_34707_cov_4.869829:24884..28018 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1884.t1Gcaud1884.t1Gracilaria caudata M_176_S67 malemRNANODE_238_length_34707_cov_4.869829 24884..28018 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1884.t1 ID=Gcaud1884.t1|Name=Gcaud1884.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=567bp
MKSINFVSPFIAKGHPSRSHPIGPRIQLCAKVSSPPADILVVAANRGLGA
HLCRALRDADNLHTTHRPCSATSSEQEQASTTHALDALDGSAAEALFQSL
KPRTVVSCIGGEPGALELPDFEGNKNLIDAARRASVRHFVLISALGAGNS
EGSVPFQVMDTLRPLLLEKSRAEAYLKKTPDMEWTIVRPAPIVDGKGGKP
VATEDVSCYGTITRPDLAGVVKRILASEKAKNKTLHVVDRTGLLIVAPYS
WLPPSVATVTDNSTGSKIYIVGCVHGSNFSANDVCQVLDRTDPDAIVLEL
CEPRLKALRKTIAKKDEGSQYAANIGARTKKSFAQLSKSFGGRGPAIVAL
VLEKVYEFQTLVGIDPGIEFVEPIVRFPPNRIICGDVLARDTVNALFRVF
AAPFRSLNDCFSSVVDIFNRVMFPPQGGVQMLLVFLRSPGRLLELLRLIF
PASLVAILIGLVGNAGAFAFDMTPIGASVSHPVFAASLASLSSLVDSLLL
AYVSVSLLRFTKVLIADRDKVLSESVLNTLSSFRKGQGAPVTVCVVVGLL
HVNGILRILQKRIESV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
IPR036291NAD(P)-bd_dom_sf