Gcaud3550.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud3550.t1
Unique NameGcaud3550.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length408
Homology
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BLAST of Gcaud3550.t1 vs. uniprot
Match: A0A2V3IE01_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE01_9FLOR)

HSP 1 Score: 282 bits (722), Expect = 4.050e-89
Identity = 171/338 (50.59%), Postives = 224/338 (66.27%), Query Frame = 0 
Query:   11 THVLYIESALASLESTIRRGIAPDSLAKFHPLEKLADLYLERPAGHRLDNIDRALASYALASRTAACALQPSADLNRARLSAKLAKCWYLRWQYVSHHC-ADMPLV--KRAHLRAAADAIDIALQRYDDCRDWEHDADQCVVYKHALLCKGFIYHAMCTNMDLQTFCDVQ---SDDVDL-----QDKQNLWRRMYVNSCIQSLEKALLSRAPGQPCDPPQSNQSETKPPYVNKSQVTCNSSVQKCIQLDVHNATKARAIICLARAYVDVSNTASEKVSSALNLLGGVEGMLEDVDVNKHHDGFVVKEDDLQRMKEDSKCLQRLLKQNRPAASEGGCII 337
            TH L+ E ALA+LES +RRGI P+ L+ FHPLE+L DLYL RP GHR+DN+DRAL SY LASRTAACAL   ADL RARLSAKLA+ W++R Q VS    +D+  +  +RAHLRAAADAIDIALQRY+DC    H +   V Y+ ALL KG IY  +C  +D Q     +    D+VD      + K+ +W+RMY NSCIQ+LEK  +  A    CD  Q  ++ T    VN  ++  N+  Q      +   TK R I+CLARAYV  +NT S++VS+ALNLL  V+ ML++V V  ++DGF V E+DL+RMKE+++CL+ LL  N   A+EG C++
Sbjct:   20 THPLHFEKALAALESALRRGIPPNQLSGFHPLEQLGDLYLSRPTGHRVDNLDRALLSYTLASRTAACALNAQADLCRARLSAKLAQSWFVRLQTVSGTPQSDVAGISAERAHLRAAADAIDIALQRYEDCAQNTHPSSL-VGYRRALLFKGLIYDTLCRCLDAQLAFTAEIAVDDNVDATRTVAEAKRAVWKRMYNNSCIQALEKLFVDTA--DRCDE-QGKENCTN--NVNSGEMEANTQRQGD---QLPGVTKVRGILCLARAYVGSANTGSKQVSAALNLLRDVDTMLDNVIVPVYYDGFRVDEEDLKRMKEEARCLEALLAANDRPAAEGRCVV 348
The following BLAST results are available for this feature:
BLAST of Gcaud3550.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IE01_9FLOR4.050e-8950.59Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_237_length_34827_cov_4.750864contigNODE_237_length_34827_cov_4.750864:32056..33451 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud3550.t1Gcaud3550.t1Gracilaria caudata M_176_S67 malemRNANODE_237_length_34827_cov_4.750864 32056..33451 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud3550.t1 ID=Gcaud3550.t1|Name=Gcaud3550.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=408bp
MSSRGARPDLTHVLYIESALASLESTIRRGIAPDSLAKFHPLEKLADLYL
ERPAGHRLDNIDRALASYALASRTAACALQPSADLNRARLSAKLAKCWYL
RWQYVSHHCADMPLVKRAHLRAAADAIDIALQRYDDCRDWEHDADQCVVY
KHALLCKGFIYHAMCTNMDLQTFCDVQSDDVDLQDKQNLWRRMYVNSCIQ
SLEKALLSRAPGQPCDPPQSNQSETKPPYVNKSQVTCNSSVQKCIQLDVH
NATKARAIICLARAYVDVSNTASEKVSSALNLLGGVEGMLEDVDVNKHHD
GFVVKEDDLQRMKEDSKCLQRLLKQNRPAASEGGCIISGSIRVSQFQGLY
CFADASFSRIQALIRRQQSVLAYCASDMNMPLLTTLNVFHRIEAHMPDLL
AVIGRTD*
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